RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 EIF4A1P60842 406 aaKnown RBP13.89□□□□□ -0.19
LINC01550-206ENST00000556462 NKX1-1Q15270 411 aaPredicted RBP13.89□□□□□ -0.19
LINC01550-206ENST00000556462 SPATA31A1Q5TZJ5 1347 aa13.89□□□□□ -0.19
LINC01550-206ENST00000556462 KIF16BQ96L93 1317 aa13.89□□□□□ -0.19
LINC01550-206ENST00000556462 TRIM27P14373 513 aa13.89□□□□□ -0.19
LINC01550-206ENST00000556462 ATF7IPQ6VMQ6 1270 aa13.89□□□□□ -0.19
LINC01550-206ENST00000556462 NFATC2IPQ8NCF5 419 aa13.89□□□□□ -0.19
LINC01550-206ENST00000556462 B4GALNT3Q6L9W6 998 aa13.88□□□□□ -0.19
LINC01550-206ENST00000556462 DDX54Q8TDD1 881 aaKnown RBP13.88□□□□□ -0.19
LINC01550-206ENST00000556462 CLUAP1Q96AJ1 413 aa13.88□□□□□ -0.19
LINC01550-206ENST00000556462 NRAPQ86VF7 1730 aa13.88□□□□□ -0.19
LINC01550-206ENST00000556462 FNBP4Q8N3X1 1017 aaPredicted RBP13.87□□□□□ -0.19
LINC01550-206ENST00000556462 C8orf37Q96NL8 207 aa13.87□□□□□ -0.19
LINC01550-206ENST00000556462 VIRMAQ69YN4 1812 aaKnown RBP13.87□□□□□ -0.19
LINC01550-206ENST00000556462 SCN11AQ9UI33 1791 aa13.87□□□□□ -0.19
LINC01550-206ENST00000556462 SOS1Q07889 1333 aaPredicted RBP13.87□□□□□ -0.19
LINC01550-206ENST00000556462 SPATA31A5Q5VU36 1347 aa13.87□□□□□ -0.19
LINC01550-206ENST00000556462 SPATA31A7Q8IWB4 1347 aa13.87□□□□□ -0.19
LINC01550-206ENST00000556462 IPO8O15397 1037 aaKnown RBP13.87□□□□□ -0.19
LINC01550-206ENST00000556462 UNC5CLQ8IV45 518 aa13.87□□□□□ -0.19
LINC01550-206ENST00000556462 NGLY1Q96IV0 654 aa13.87□□□□□ -0.19
LINC01550-206ENST00000556462 COG6Q9Y2V7 657 aa13.87□□□□□ -0.19
LINC01550-206ENST00000556462 THRAP3Q9Y2W1 955 aaKnown RBP13.87□□□□□ -0.19
LINC01550-206ENST00000556462 LRP6O75581 1613 aa13.87□□□□□ -0.19
LINC01550-206ENST00000556462 DZIP1LQ8IYY4 767 aaKnown RBP13.86□□□□□ -0.19
LINC01550-206ENST00000556462 ARHGAP45Q92619 1136 aa13.86□□□□□ -0.19
LINC01550-206ENST00000556462 SIPA1L3O60292 1781 aaPredicted RBP13.86□□□□□ -0.19
LINC01550-206ENST00000556462 KDM3BQ7LBC6 1761 aa13.86□□□□□ -0.19
LINC01550-206ENST00000556462 BCL9LQ86UU0 1499 aa13.86□□□□□ -0.19
LINC01550-206ENST00000556462 HEG1Q9ULI3 1381 aa13.86□□□□□ -0.19
LINC01550-206ENST00000556462 NWD2Q9ULI1 1742 aa13.86□□□□□ -0.19
LINC01550-206ENST00000556462 MRC1P22897 1456 aa13.85□□□□□ -0.19
LINC01550-206ENST00000556462 SHANK3Q9BYB0 1731 aa13.85□□□□□ -0.19
LINC01550-206ENST00000556462 ZNF790Q6PG37 636 aa13.85□□□□□ -0.19
LINC01550-206ENST00000556462 ERVV-2B6SEH9 535 aa13.84□□□□□ -0.19
LINC01550-206ENST00000556462 EXOC5O00471 708 aa13.84□□□□□ -0.19
LINC01550-206ENST00000556462 SLC4A2P04920 1241 aa13.84□□□□□ -0.19
LINC01550-206ENST00000556462 MS4A1P11836 297 aa13.84□□□□□ -0.19
LINC01550-206ENST00000556462 CABP4P57796 275 aa13.84□□□□□ -0.19
LINC01550-206ENST00000556462 SLC39A6Q13433 755 aa13.84□□□□□ -0.19
LINC01550-206ENST00000556462 HOXB7P09629 217 aa13.84□□□□□ -0.19
LINC01550-206ENST00000556462 CCDC136Q96JN2 1154 aa13.84□□□□□ -0.19
LINC01550-206ENST00000556462 CDCA7Q9BWT1 371 aaPredicted RBP13.84□□□□□ -0.19
LINC01550-206ENST00000556462 GIGYF1O75420 1035 aaPredicted RBP13.83□□□□□ -0.2
LINC01550-206ENST00000556462 CCDC30Q5VVM6 783 aa13.83□□□□□ -0.2
LINC01550-206ENST00000556462 BARGINQ6ZT62 677 aa13.83□□□□□ -0.2
LINC01550-206ENST00000556462 FTSJ3Q8IY81 847 aaKnown RBP13.83□□□□□ -0.2
LINC01550-206ENST00000556462 MVPQ14764 893 aaKnown RBP13.83□□□□□ -0.2
LINC01550-206ENST00000556462 VPS72Q15906 364 aa13.83□□□□□ -0.2
LINC01550-206ENST00000556462 TMEM57Q8N5G2 664 aa13.82□□□□□ -0.2
LINC01550-206ENST00000556462 NECTIN2Q92692 538 aa13.82□□□□□ -0.2
LINC01550-206ENST00000556462 CCDC9Q9Y3X0 531 aaKnown RBP13.82□□□□□ -0.2
LINC01550-206ENST00000556462 HDGFL1Q5TGJ6 251 aa13.81□□□□□ -0.2
LINC01550-206ENST00000556462 G2E3Q7L622 706 aa13.81□□□□□ -0.2
LINC01550-206ENST00000556462 PRAMEF22A3QJZ6 481 aa13.81□□□□□ -0.2
LINC01550-206ENST00000556462 STK31Q9BXU1 1019 aa13.81□□□□□ -0.2
LINC01550-206ENST00000556462 USP21Q9UK80 565 aa13.81□□□□□ -0.2
LINC01550-206ENST00000556462 EIF2S2P20042 333 aaKnown RBP13.8□□□□□ -0.2
LINC01550-206ENST00000556462 DDB1Q16531 1140 aa13.8□□□□□ -0.2
LINC01550-206ENST00000556462 ZNF496Q96IT1 587 aaPredicted RBP13.8□□□□□ -0.2
LINC01550-206ENST00000556462 API5Q9BZZ5 524 aaKnown RBP13.8□□□□□ -0.2
LINC01550-206ENST00000556462 ABCC4O15439 1325 aa13.8□□□□□ -0.2
LINC01550-206ENST00000556462 PTPRCP08575 1304 aa13.8□□□□□ -0.2
LINC01550-206ENST00000556462 TNS2Q63HR2 1409 aa13.8□□□□□ -0.2
LINC01550-206ENST00000556462 RGS12O14924 1447 aa13.79□□□□□ -0.2
LINC01550-206ENST00000556462 CHMP4AQ9BY43 222 aa13.79□□□□□ -0.2
LINC01550-206ENST00000556462 WNK3Q9BYP7 1800 aa13.79□□□□□ -0.2
LINC01550-206ENST00000556462 AAMPQ13685 434 aa13.78□□□□□ -0.2
LINC01550-206ENST00000556462 MEX3CQ5U5Q3 659 aaKnown RBP13.78□□□□□ -0.2
LINC01550-206ENST00000556462 ITPRIPQ8IWB1 547 aa13.78□□□□□ -0.2
LINC01550-206ENST00000556462 TTC5Q8N0Z6 440 aa13.78□□□□□ -0.2
LINC01550-206ENST00000556462 DDX19BQ9UMR2 479 aa13.78□□□□□ -0.2
LINC01550-206ENST00000556462 FLIIQ13045 1269 aa13.78□□□□□ -0.2
LINC01550-206ENST00000556462 FAM98CQ17RN3 349 aaKnown RBP13.78□□□□□ -0.2
LINC01550-206ENST00000556462 MARCH10Q8NA82 808 aaPredicted RBP13.77□□□□□ -0.21
LINC01550-206ENST00000556462 PIGBQ92521 554 aa13.77□□□□□ -0.21
LINC01550-206ENST00000556462 FMNL2Q96PY5 1086 aa13.77□□□□□ -0.21
LINC01550-206ENST00000556462 CHPF2Q9P2E5 772 aa13.77□□□□□ -0.21
LINC01550-206ENST00000556462 TOGARAM1Q9Y4F4 1720 aa13.77□□□□□ -0.21
LINC01550-206ENST00000556462 SNRPA1P09661 255 aaKnown RBP13.76□□□□□ -0.21
LINC01550-206ENST00000556462 PHAXQ9H814 394 aaKnown RBP13.76□□□□□ -0.21
LINC01550-206ENST00000556462 TMOD3Q9NYL9 352 aa13.76□□□□□ -0.21
LINC01550-206ENST00000556462 AFF2P51816 1311 aa13.76□□□□□ -0.21
LINC01550-206ENST00000556462 ZBTB7BO15156 539 aaPredicted RBP13.76□□□□□ -0.21
LINC01550-206ENST00000556462 INTS3Q68E01 1043 aaKnown RBP13.76□□□□□ -0.21
LINC01550-206ENST00000556462 ZBTB40Q9NUA8 1239 aa13.76□□□□□ -0.21
LINC01550-206ENST00000556462 DBF4Q9UBU7 674 aaPredicted RBP13.76□□□□□ -0.21
LINC01550-206ENST00000556462 USP16Q9Y5T5 823 aa13.76□□□□□ -0.21
LINC01550-206ENST00000556462 PDIA6Q15084 440 aa13.75□□□□□ -0.21
LINC01550-206ENST00000556462 PCDHB15Q9Y5E8 787 aa13.75□□□□□ -0.21
LINC01550-206ENST00000556462 F6X3S4 739 aa13.75□□□□□ -0.21
LINC01550-206ENST00000556462 ANXA1P04083 346 aa13.75□□□□□ -0.21
LINC01550-206ENST00000556462 CACNA1FO60840 1977 aa13.74□□□□□ -0.21
LINC01550-206ENST00000556462 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.74□□□□□ -0.21
LINC01550-206ENST00000556462 KDM2BQ8NHM5 1336 aa13.74□□□□□ -0.21
LINC01550-206ENST00000556462 FKBP5Q13451 457 aaPredicted RBP13.74□□□□□ -0.21
LINC01550-206ENST00000556462 PROSER3Q2NL68 480 aa13.74□□□□□ -0.21
LINC01550-206ENST00000556462 GJD4Q96KN9 370 aaPredicted RBP13.74□□□□□ -0.21
LINC01550-206ENST00000556462 ASAP1Q9ULH1 1129 aa13.74□□□□□ -0.21
LINC01550-206ENST00000556462 BCL9O00512 1426 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms