RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, human

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATL1-208	ENST00000556067	PARP9	Q8IXQ6	854 aa		7.51	□□□□□ -1.21
ATL1-208	ENST00000556067	TERF2IP	Q9NYB0	399 aa		7.51	□□□□□ -1.21
ATL1-208	ENST00000556067	AMOTL2	Q9Y2J4	779 aa		7.51	□□□□□ -1.21
ATL1-208	ENST00000556067	DLC1	Q96QB1	1528 aa		7.51	□□□□□ -1.21
ATL1-208	ENST00000556067	ATAD2	Q6PL18	1390 aa		7.5	□□□□□ -1.21
ATL1-208	ENST00000556067	PIK3R4	Q99570	1358 aa		7.5	□□□□□ -1.21
ATL1-208	ENST00000556067	NINL	Q9Y2I6	1382 aa		7.5	□□□□□ -1.21
ATL1-208	ENST00000556067	SETD1B	Q9UPS6	1966 aa	Known RBP	7.5	□□□□□ -1.21
ATL1-208	ENST00000556067	TLL1	O43897	1013 aa		7.5	□□□□□ -1.21
ATL1-208	ENST00000556067	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	7.5	□□□□□ -1.21
ATL1-208	ENST00000556067	WAPL	Q7Z5K2	1190 aa		7.5	□□□□□ -1.21
ATL1-208	ENST00000556067	NKX2-3	Q8TAU0	364 aa		7.5	□□□□□ -1.21
ATL1-208	ENST00000556067	TMUB1	Q9BVT8	246 aa		7.5	□□□□□ -1.21
ATL1-208	ENST00000556067	CDK19	Q9BWU1	502 aa		7.5	□□□□□ -1.21
ATL1-208	ENST00000556067	FAM135B	Q49AJ0	1406 aa		7.5	□□□□□ -1.21
ATL1-208	ENST00000556067	QRICH2	Q9H0J4	1663 aa		7.49	□□□□□ -1.21
ATL1-208	ENST00000556067	ZPR1	O75312	459 aa		7.49	□□□□□ -1.21
ATL1-208	ENST00000556067	NR1I2	O75469	434 aa		7.49	□□□□□ -1.21
ATL1-208	ENST00000556067	ATP6V1A	P38606	617 aa		7.49	□□□□□ -1.21
ATL1-208	ENST00000556067	MRS2	Q9HD23	443 aa		7.49	□□□□□ -1.21
ATL1-208	ENST00000556067	ADAMTS13	Q76LX8	1427 aa		7.49	□□□□□ -1.21
ATL1-208	ENST00000556067	DIP2A	Q14689	1571 aa		7.49	□□□□□ -1.21
ATL1-208	ENST00000556067	ASXL1	Q8IXJ9	1541 aa		7.48	□□□□□ -1.21
ATL1-208	ENST00000556067	WASL	O00401	505 aa	Predicted RBP	7.48	□□□□□ -1.21
ATL1-208	ENST00000556067	TECPR2	O15040	1411 aa		7.48	□□□□□ -1.21
ATL1-208	ENST00000556067	NPHP4	O75161	1426 aa	Predicted RBP	7.48	□□□□□ -1.21
ATL1-208	ENST00000556067	KDM4A	O75164	1064 aa		7.48	□□□□□ -1.21
ATL1-208	ENST00000556067	CC2D1B	Q5T0F9	858 aa	Known RBP	7.48	□□□□□ -1.21
ATL1-208	ENST00000556067	NUTM1	Q86Y26	1132 aa		7.48	□□□□□ -1.21
ATL1-208	ENST00000556067	MYBBP1A	Q9BQG0	1328 aa	Known RBP	7.48	□□□□□ -1.21
ATL1-208	ENST00000556067	ZNF142	P52746	1687 aa	Predicted RBP	7.47	□□□□□ -1.21
ATL1-208	ENST00000556067	ARHGEF28	Q8N1W1	1705 aa	Known RBP	7.47	□□□□□ -1.21
ATL1-208	ENST00000556067		A0A0G2JS52	829 aa		7.47	□□□□□ -1.21
ATL1-208	ENST00000556067	GRIPAP1	Q4V328	841 aa		7.47	□□□□□ -1.21
ATL1-208	ENST00000556067	C14orf37	Q86TY3	774 aa		7.47	□□□□□ -1.21
ATL1-208	ENST00000556067	SLC12A5	Q9H2X9	1139 aa		7.47	□□□□□ -1.21
ATL1-208	ENST00000556067	CGNL1	Q0VF96	1302 aa		7.47	□□□□□ -1.21
ATL1-208	ENST00000556067	NRXN3	Q9Y4C0	1643 aa		7.46	□□□□□ -1.21
ATL1-208	ENST00000556067	PER1	O15534	1290 aa	Predicted RBP	7.46	□□□□□ -1.22
ATL1-208	ENST00000556067	MS4A1	P11836	297 aa		7.46	□□□□□ -1.22
ATL1-208	ENST00000556067	MORN1	Q5T089	497 aa		7.46	□□□□□ -1.22
ATL1-208	ENST00000556067	IFFO2	Q5TF58	517 aa		7.46	□□□□□ -1.22
ATL1-208	ENST00000556067	NLRP13	Q86W25	1043 aa		7.46	□□□□□ -1.22
ATL1-208	ENST00000556067	SCUBE3	Q8IX30	993 aa		7.46	□□□□□ -1.22
ATL1-208	ENST00000556067	HLA-C	Q95604	372 aa		7.46	□□□□□ -1.22
ATL1-208	ENST00000556067	BEGAIN	Q9BUH8	593 aa		7.46	□□□□□ -1.22
ATL1-208	ENST00000556067	MED14	O60244	1454 aa		7.46	□□□□□ -1.22
ATL1-208	ENST00000556067	PLEKHH1	Q9ULM0	1364 aa		7.46	□□□□□ -1.22
ATL1-208	ENST00000556067	KCNA6	P17658	529 aa		7.45	□□□□□ -1.22
ATL1-208	ENST00000556067	GUCA2A	Q02747	115 aa		7.45	□□□□□ -1.22
ATL1-208	ENST00000556067	MORC1	Q86VD1	984 aa		7.45	□□□□□ -1.22
ATL1-208	ENST00000556067	NUDT16	Q96DE0	195 aa	Known RBP	7.45	□□□□□ -1.22
ATL1-208	ENST00000556067	CABP1	Q9NZU7	370 aa		7.45	□□□□□ -1.22
ATL1-208	ENST00000556067	SLC27A5	Q9Y2P5	690 aa		7.45	□□□□□ -1.22
ATL1-208	ENST00000556067	CPS1	P31327	1500 aa		7.45	□□□□□ -1.22
ATL1-208	ENST00000556067	ANKRD36B	Q8N2N9	1353 aa		7.45	□□□□□ -1.22
ATL1-208	ENST00000556067	ROBO2	Q9HCK4	1378 aa		7.45	□□□□□ -1.22
ATL1-208	ENST00000556067	NPC1L1	Q9UHC9	1359 aa		7.45	□□□□□ -1.22
ATL1-208	ENST00000556067	PTCH1	Q13635	1447 aa		7.44	□□□□□ -1.22
ATL1-208	ENST00000556067	TULP4	Q9NRJ4	1543 aa		7.44	□□□□□ -1.22
ATL1-208	ENST00000556067	FAM9B	Q8IZU0	186 aa		7.44	□□□□□ -1.22
ATL1-208	ENST00000556067	GPBP1L1	Q9HC44	474 aa	Predicted RBP	7.44	□□□□□ -1.22
ATL1-208	ENST00000556067	BRD4	O60885	1362 aa	Predicted RBP	7.44	□□□□□ -1.22
ATL1-208	ENST00000556067	SETD1A	O15047	1707 aa	Known RBP	7.44	□□□□□ -1.22
ATL1-208	ENST00000556067	KNDC1	Q76NI1	1749 aa		7.44	□□□□□ -1.22
ATL1-208	ENST00000556067	NSD3	Q9BZ95	1437 aa		7.44	□□□□□ -1.22
ATL1-208	ENST00000556067	HOXA2	O43364	376 aa		7.43	□□□□□ -1.22
ATL1-208	ENST00000556067	USP46	P62068	366 aa		7.43	□□□□□ -1.22
ATL1-208	ENST00000556067	PPP1R18	Q6NYC8	613 aa		7.43	□□□□□ -1.22
ATL1-208	ENST00000556067	PROSER2	Q86WR7	435 aa	Predicted RBP	7.43	□□□□□ -1.22
ATL1-208	ENST00000556067	CARD14	Q9BXL6	1004 aa		7.43	□□□□□ -1.22
ATL1-208	ENST00000556067	NSD2	O96028	1365 aa		7.43	□□□□□ -1.22
ATL1-208	ENST00000556067	PARD3	Q8TEW0	1356 aa		7.43	□□□□□ -1.22
ATL1-208	ENST00000556067	PTPRU	Q92729	1446 aa		7.43	□□□□□ -1.22
ATL1-208	ENST00000556067	FMNL1	O95466	1100 aa	Predicted RBP	7.42	□□□□□ -1.22
ATL1-208	ENST00000556067	ADH1B	P00325	375 aa		7.42	□□□□□ -1.22
ATL1-208	ENST00000556067	PRKCSH	P14314	528 aa	Predicted RBP	7.42	□□□□□ -1.22
ATL1-208	ENST00000556067	GGCX	P38435	758 aa		7.42	□□□□□ -1.22
ATL1-208	ENST00000556067	HSPA2	P54652	639 aa		7.42	□□□□□ -1.22
ATL1-208	ENST00000556067	WDR43	Q15061	677 aa	Known RBP eCLIP	7.42	□□□□□ -1.22
ATL1-208	ENST00000556067	SPIRE2	Q8WWL2	714 aa		7.42	□□□□□ -1.22
ATL1-208	ENST00000556067	CFAP53	Q96M91	514 aa		7.42	□□□□□ -1.22
ATL1-208	ENST00000556067	SPSB2	Q99619	263 aa		7.42	□□□□□ -1.22
ATL1-208	ENST00000556067	PPIP5K1	Q6PFW1	1433 aa		7.42	□□□□□ -1.22
ATL1-208	ENST00000556067	S1PR4	O95977	384 aa		7.41	□□□□□ -1.22
ATL1-208	ENST00000556067	PPP2R1A	P30153	589 aa		7.41	□□□□□ -1.22
ATL1-208	ENST00000556067	RNF19B	Q6ZMZ0	732 aa		7.41	□□□□□ -1.22
ATL1-208	ENST00000556067	NGDN	Q8NEJ9	315 aa	Known RBP	7.41	□□□□□ -1.22
ATL1-208	ENST00000556067	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	7.41	□□□□□ -1.22
ATL1-208	ENST00000556067	ATP7B	P35670	1465 aa		7.41	□□□□□ -1.22
ATL1-208	ENST00000556067	PLEKHG3	A1L390	1219 aa		7.4	□□□□□ -1.22
ATL1-208	ENST00000556067	NDUFV2	P19404	249 aa		7.4	□□□□□ -1.22
ATL1-208	ENST00000556067	HNRNPU	Q00839	825 aa	Known RBP eCLIP	7.4	□□□□□ -1.22
ATL1-208	ENST00000556067	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	7.4	□□□□□ -1.22
ATL1-208	ENST00000556067	TBC1D2	Q9BYX2	928 aa		7.4	□□□□□ -1.22
ATL1-208	ENST00000556067	SLC6A16	Q9GZN6	736 aa		7.4	□□□□□ -1.22
ATL1-208	ENST00000556067	KDM4C	Q9H3R0	1056 aa		7.4	□□□□□ -1.22
ATL1-208	ENST00000556067		A0A1W2PP64	1363 aa		7.4	□□□□□ -1.22
ATL1-208	ENST00000556067	MYOM1	P52179	1685 aa		7.39	□□□□□ -1.23
ATL1-208	ENST00000556067	MOXD2P	A6NHM9	499 aa		7.39	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms