RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 CNTROBQ8N137 903 aa12.37□□□□□ -0.43
PSEN1-215ENST00000556011 CCNL1Q9UK58 526 aaPredicted RBP12.37□□□□□ -0.43
PSEN1-215ENST00000556011 CLEC11AQ9Y240 323 aa12.37□□□□□ -0.43
PSEN1-215ENST00000556011 BDP1A6H8Y1 2624 aa12.36□□□□□ -0.43
PSEN1-215ENST00000556011 TNFRSF10AO00220 468 aa12.36□□□□□ -0.43
PSEN1-215ENST00000556011 MAP1SQ66K74 1059 aaPredicted RBP12.36□□□□□ -0.43
PSEN1-215ENST00000556011 ACIN1Q9UKV3 1341 aaKnown RBP12.36□□□□□ -0.43
PSEN1-215ENST00000556011 FMR1Q06787 632 aaKnown RBP eCLIP12.35□□□□□ -0.43
PSEN1-215ENST00000556011 EAPPQ56P03 285 aaPredicted RBP12.35□□□□□ -0.43
PSEN1-215ENST00000556011 AMIGO3Q86WK7 504 aa12.35□□□□□ -0.43
PSEN1-215ENST00000556011 ATRXP46100 2492 aa12.35□□□□□ -0.43
PSEN1-215ENST00000556011 ZIC5Q96T25 663 aa12.34□□□□□ -0.43
PSEN1-215ENST00000556011 TAF1DQ9H5J8 278 aaPredicted RBP12.34□□□□□ -0.43
PSEN1-215ENST00000556011 DDX21Q9NR30 783 aaKnown RBP eCLIP12.34□□□□□ -0.43
PSEN1-215ENST00000556011 ARIH1Q9Y4X5 557 aaPredicted RBP12.34□□□□□ -0.43
PSEN1-215ENST00000556011 ZFHX4Q86UP3 3567 aa12.33□□□□□ -0.44
PSEN1-215ENST00000556011 DDNO94850 711 aaPredicted RBP12.33□□□□□ -0.44
PSEN1-215ENST00000556011 MMP10P09238 476 aa12.33□□□□□ -0.44
PSEN1-215ENST00000556011 PRO3102Q9H379 93 aa12.33□□□□□ -0.44
PSEN1-215ENST00000556011 ADAMTSL1Q8N6G6 1762 aa12.33□□□□□ -0.44
PSEN1-215ENST00000556011 C5P01031 1676 aa12.32□□□□□ -0.44
PSEN1-215ENST00000556011 CPDO75976 1380 aa12.32□□□□□ -0.44
PSEN1-215ENST00000556011 PKN2Q16513 984 aaKnown RBP12.32□□□□□ -0.44
PSEN1-215ENST00000556011 MTMR10Q9NXD2 777 aa12.32□□□□□ -0.44
PSEN1-215ENST00000556011 STK26Q9P289 416 aa12.32□□□□□ -0.44
PSEN1-215ENST00000556011 SCN4AP35499 1836 aa12.32□□□□□ -0.44
PSEN1-215ENST00000556011 TRPM7Q96QT4 1865 aa12.31□□□□□ -0.44
PSEN1-215ENST00000556011 RBBP6Q7Z6E9 1792 aaKnown RBP12.31□□□□□ -0.44
PSEN1-215ENST00000556011 DACH1Q9UI36 760 aa12.31□□□□□ -0.44
PSEN1-215ENST00000556011 TLL2Q9Y6L7 1015 aa12.31□□□□□ -0.44
PSEN1-215ENST00000556011 TOGARAM1Q9Y4F4 1720 aa12.31□□□□□ -0.44
PSEN1-215ENST00000556011 E9PCH4 1651 aa12.3□□□□□ -0.44
PSEN1-215ENST00000556011 SCN11AQ9UI33 1791 aa12.3□□□□□ -0.44
PSEN1-215ENST00000556011 SLIT3O75094 1523 aa12.29□□□□□ -0.44
PSEN1-215ENST00000556011 PHF14O94880 888 aa12.29□□□□□ -0.44
PSEN1-215ENST00000556011 EN2P19622 333 aaPredicted RBP12.29□□□□□ -0.44
PSEN1-215ENST00000556011 SYMPKQ92797 1274 aaKnown RBP12.29□□□□□ -0.44
PSEN1-215ENST00000556011 DICER1Q9UPY3 1922 aaKnown RBP12.29□□□□□ -0.44
PSEN1-215ENST00000556011 CEP162Q5TB80 1403 aa12.28□□□□□ -0.44
PSEN1-215ENST00000556011 NCOR1O75376 2440 aa12.28□□□□□ -0.44
PSEN1-215ENST00000556011 ABCC6O95255 1503 aa12.28□□□□□ -0.44
PSEN1-215ENST00000556011 AKAP4Q5JQC9 854 aa12.28□□□□□ -0.44
PSEN1-215ENST00000556011 CST9Q5W186 159 aa12.28□□□□□ -0.44
PSEN1-215ENST00000556011 ZBTB7CA1YPR0 619 aa12.27□□□□□ -0.45
PSEN1-215ENST00000556011 IQCA1LA6NCM1 817 aa12.27□□□□□ -0.45
PSEN1-215ENST00000556011 TRPA1O75762 1119 aa12.27□□□□□ -0.45
PSEN1-215ENST00000556011 KRT37O76014 449 aa12.27□□□□□ -0.45
PSEN1-215ENST00000556011 KCTD2Q14681 263 aa12.27□□□□□ -0.45
PSEN1-215ENST00000556011 ANKRD11Q6UB99 2663 aaPredicted RBP12.27□□□□□ -0.45
PSEN1-215ENST00000556011 TAF1LQ8IZX4 1826 aa12.27□□□□□ -0.45
PSEN1-215ENST00000556011 UBR3Q6ZT12 1888 aa12.27□□□□□ -0.45
PSEN1-215ENST00000556011 AKAP11Q9UKA4 1901 aa12.27□□□□□ -0.45
PSEN1-215ENST00000556011 SAGE1Q9NXZ1 904 aa12.26□□□□□ -0.45
PSEN1-215ENST00000556011 ZDBF2Q9HCK1 2354 aa12.26□□□□□ -0.45
PSEN1-215ENST00000556011 MRE11P49959 708 aa12.25□□□□□ -0.45
PSEN1-215ENST00000556011 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.24□□□□□ -0.45
PSEN1-215ENST00000556011 FBXO46Q6PJ61 603 aaPredicted RBP12.24□□□□□ -0.45
PSEN1-215ENST00000556011 CFAP54Q96N23 3096 aa12.24□□□□□ -0.45
PSEN1-215ENST00000556011 HCN4Q9Y3Q4 1203 aa12.24□□□□□ -0.45
PSEN1-215ENST00000556011 EPG5Q9HCE0 2579 aa12.24□□□□□ -0.45
PSEN1-215ENST00000556011 WDR17Q8IZU2 1322 aa12.23□□□□□ -0.45
PSEN1-215ENST00000556011 NBPF1Q3BBV0 1214 aa12.23□□□□□ -0.45
PSEN1-215ENST00000556011 GPR153Q6NV75 609 aa12.23□□□□□ -0.45
PSEN1-215ENST00000556011 SYTL4Q96C24 671 aaPredicted RBP12.23□□□□□ -0.45
PSEN1-215ENST00000556011 CCDC87Q9NVE4 849 aa12.23□□□□□ -0.45
PSEN1-215ENST00000556011 RNF186Q9NXI6 227 aa12.23□□□□□ -0.45
PSEN1-215ENST00000556011 KMT2BQ9UMN6 2715 aaPredicted RBP12.22□□□□□ -0.45
PSEN1-215ENST00000556011 SAPCD2Q86UD0 394 aa12.22□□□□□ -0.45
PSEN1-215ENST00000556011 CHRNA5P30532 468 aa12.21□□□□□ -0.45
PSEN1-215ENST00000556011 ERFEQ4G0M1 354 aa12.21□□□□□ -0.45
PSEN1-215ENST00000556011 HDAC9Q9UKV0 1011 aa12.21□□□□□ -0.45
PSEN1-215ENST00000556011 PPLO60437 1756 aa12.2□□□□□ -0.46
PSEN1-215ENST00000556011 RPTORQ8N122 1335 aa12.2□□□□□ -0.46
PSEN1-215ENST00000556011 NFKBIEO00221 500 aa12.2□□□□□ -0.46
PSEN1-215ENST00000556011 CARD10Q9BWT7 1032 aa12.2□□□□□ -0.46
PSEN1-215ENST00000556011 SPTBN4Q9H254 2564 aa12.19□□□□□ -0.46
PSEN1-215ENST00000556011 A0A1W2PPC1 479 aa12.19□□□□□ -0.46
PSEN1-215ENST00000556011 PRIM1P49642 420 aaKnown RBP12.19□□□□□ -0.46
PSEN1-215ENST00000556011 NOGQ13253 232 aa12.19□□□□□ -0.46
PSEN1-215ENST00000556011 NGDNQ8NEJ9 315 aaKnown RBP12.19□□□□□ -0.46
PSEN1-215ENST00000556011 C4BP0C0L5 1744 aa12.19□□□□□ -0.46
PSEN1-215ENST00000556011 C4AP0C0L4 1744 aa12.18□□□□□ -0.46
PSEN1-215ENST00000556011 TRAF5O00463 557 aa12.18□□□□□ -0.46
PSEN1-215ENST00000556011 FOXK2Q01167 660 aa12.18□□□□□ -0.46
PSEN1-215ENST00000556011 SYNE4Q8N205 404 aa12.18□□□□□ -0.46
PSEN1-215ENST00000556011 ANKARQ7Z5J8 1434 aa12.18□□□□□ -0.46
PSEN1-215ENST00000556011 CHD6Q8TD26 2715 aa12.17□□□□□ -0.46
PSEN1-215ENST00000556011 L3MBTL3Q96JM7 780 aaPredicted RBP12.17□□□□□ -0.46
PSEN1-215ENST00000556011 AK7Q96M32 723 aa12.17□□□□□ -0.46
PSEN1-215ENST00000556011 PPIP5K1Q6PFW1 1433 aa12.17□□□□□ -0.46
PSEN1-215ENST00000556011 RGPD5Q99666 1765 aa12.17□□□□□ -0.46
PSEN1-215ENST00000556011 NSD2O96028 1365 aa12.17□□□□□ -0.46
PSEN1-215ENST00000556011 UBTFP17480 764 aaKnown RBP12.16□□□□□ -0.46
PSEN1-215ENST00000556011 EPHX2P34913 555 aa12.16□□□□□ -0.46
PSEN1-215ENST00000556011 INTS3Q68E01 1043 aaKnown RBP12.16□□□□□ -0.46
PSEN1-215ENST00000556011 AXIN2Q9Y2T1 843 aa12.16□□□□□ -0.46
PSEN1-215ENST00000556011 CFAP47Q6ZTR5 3102 aa12.16□□□□□ -0.46
PSEN1-215ENST00000556011 GCP02774 474 aa12.15□□□□□ -0.46
PSEN1-215ENST00000556011 HHIPL1Q96JK4 782 aa12.15□□□□□ -0.46
PSEN1-215ENST00000556011 VGFO15240 615 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms