RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 RARSP54136 660 aaKnown RBP12.51□□□□□ -0.41
EFCAB11-208ENST00000555872 ITFG2Q969R8 447 aa12.51□□□□□ -0.41
EFCAB11-208ENST00000555872 FEZ2Q9UHY8 353 aaPredicted RBP12.51□□□□□ -0.41
EFCAB11-208ENST00000555872 KIF3AQ9Y496 699 aa12.51□□□□□ -0.41
EFCAB11-208ENST00000555872 PPLO60437 1756 aa12.51□□□□□ -0.41
EFCAB11-208ENST00000555872 CCDC189A1A4V9 331 aa12.51□□□□□ -0.41
EFCAB11-208ENST00000555872 CCDC66A2RUB6 948 aa12.51□□□□□ -0.41
EFCAB11-208ENST00000555872 ZNF853P0CG23 659 aa12.51□□□□□ -0.41
EFCAB11-208ENST00000555872 TNNT3P45378 269 aaPredicted RBP12.51□□□□□ -0.41
EFCAB11-208ENST00000555872 TDO2P48775 406 aa12.51□□□□□ -0.41
EFCAB11-208ENST00000555872 GPRASP1Q5JY77 1395 aa12.5□□□□□ -0.41
EFCAB11-208ENST00000555872 K7ELQ4 463 aaPredicted RBP12.5□□□□□ -0.41
EFCAB11-208ENST00000555872 KIAA2012Q0VF49 1180 aa12.5□□□□□ -0.41
EFCAB11-208ENST00000555872 GAS2L2Q8NHY3 880 aa12.5□□□□□ -0.41
EFCAB11-208ENST00000555872 MTMR7Q9Y216 660 aa12.5□□□□□ -0.41
EFCAB11-208ENST00000555872 ZNF142P52746 1687 aaPredicted RBP12.5□□□□□ -0.41
EFCAB11-208ENST00000555872 UGGT1Q9NYU2 1555 aa12.5□□□□□ -0.41
EFCAB11-208ENST00000555872 CCT2P78371 535 aaKnown RBP12.5□□□□□ -0.41
EFCAB11-208ENST00000555872 RPS6KL1Q9Y6S9 549 aa12.5□□□□□ -0.41
EFCAB11-208ENST00000555872 SCP2P22307 547 aa12.49□□□□□ -0.41
EFCAB11-208ENST00000555872 RBM42Q9BTD8 480 aaKnown RBP12.49□□□□□ -0.41
EFCAB11-208ENST00000555872 RBM27Q9P2N5 1060 aaKnown RBP12.49□□□□□ -0.41
EFCAB11-208ENST00000555872 BIRC2Q13490 618 aa12.49□□□□□ -0.41
EFCAB11-208ENST00000555872 NEUROD2Q15784 382 aa12.49□□□□□ -0.41
EFCAB11-208ENST00000555872 RBM28Q9NW13 759 aaKnown RBP12.49□□□□□ -0.41
EFCAB11-208ENST00000555872 C1QTNF12Q5T7M4 302 aa12.48□□□□□ -0.41
EFCAB11-208ENST00000555872 CLEC17AQ6ZS10 378 aa12.48□□□□□ -0.41
EFCAB11-208ENST00000555872 RNF214Q8ND24 703 aa12.48□□□□□ -0.41
EFCAB11-208ENST00000555872 TSPAN18Q96SJ8 248 aa12.48□□□□□ -0.41
EFCAB11-208ENST00000555872 KIF2CQ99661 725 aa12.48□□□□□ -0.41
EFCAB11-208ENST00000555872 C1orf115Q9H7X2 142 aa12.48□□□□□ -0.41
EFCAB11-208ENST00000555872 RAD21O60216 631 aa12.48□□□□□ -0.41
EFCAB11-208ENST00000555872 SPTY2D1Q68D10 685 aaPredicted RBP12.48□□□□□ -0.41
EFCAB11-208ENST00000555872 ATL2Q8NHH9 583 aa12.48□□□□□ -0.41
EFCAB11-208ENST00000555872 TMX1Q9H3N1 280 aa12.48□□□□□ -0.41
EFCAB11-208ENST00000555872 NRXN1Q9ULB1 1477 aa12.48□□□□□ -0.41
EFCAB11-208ENST00000555872 SETD1BQ9UPS6 1966 aaKnown RBP12.47□□□□□ -0.41
EFCAB11-208ENST00000555872 NUTM2GQ5VZR2 741 aa12.47□□□□□ -0.41
EFCAB11-208ENST00000555872 PRIMPOLQ96LW4 560 aa12.47□□□□□ -0.41
EFCAB11-208ENST00000555872 LMBRD1Q9NUN5 540 aa12.47□□□□□ -0.41
EFCAB11-208ENST00000555872 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.47□□□□□ -0.41
EFCAB11-208ENST00000555872 ERVK-7P63135 1459 aa12.47□□□□□ -0.41
EFCAB11-208ENST00000555872 RBM5P52756 815 aaKnown RBP eCLIP12.46□□□□□ -0.41
EFCAB11-208ENST00000555872 HMGN5P82970 282 aaKnown RBP12.46□□□□□ -0.41
EFCAB11-208ENST00000555872 RPGRIP1LQ68CZ1 1315 aa12.46□□□□□ -0.41
EFCAB11-208ENST00000555872 BRD1O95696 1058 aa12.46□□□□□ -0.41
EFCAB11-208ENST00000555872 RSPH14Q9UHP6 348 aa12.46□□□□□ -0.41
EFCAB11-208ENST00000555872 SYCE3A1L190 88 aa12.46□□□□□ -0.42
EFCAB11-208ENST00000555872 DHX16O60231 1041 aaKnown RBP12.46□□□□□ -0.42
EFCAB11-208ENST00000555872 PRPF40AO75400 957 aaKnown RBP12.46□□□□□ -0.42
EFCAB11-208ENST00000555872 MVPQ14764 893 aaKnown RBP12.46□□□□□ -0.42
EFCAB11-208ENST00000555872 PDCL2Q8N4E4 241 aa12.46□□□□□ -0.42
EFCAB11-208ENST00000555872 TRERF1Q96PN7 1200 aa12.46□□□□□ -0.42
EFCAB11-208ENST00000555872 KDM5AP29375 1690 aaKnown RBP12.45□□□□□ -0.42
EFCAB11-208ENST00000555872 TMEM131LA2VDJ0 1609 aa12.45□□□□□ -0.42
EFCAB11-208ENST00000555872 AK9Q5TCS8 1911 aa12.45□□□□□ -0.42
EFCAB11-208ENST00000555872 IQGAP1P46940 1657 aa12.45□□□□□ -0.42
EFCAB11-208ENST00000555872 MYBPC2Q14324 1141 aa12.45□□□□□ -0.42
EFCAB11-208ENST00000555872 FAM212AQ96EL1 285 aa12.45□□□□□ -0.42
EFCAB11-208ENST00000555872 GOLGA6CA6NDK9 693 aa12.45□□□□□ -0.42
EFCAB11-208ENST00000555872 GOLGA6BA6NDN3 693 aa12.45□□□□□ -0.42
EFCAB11-208ENST00000555872 GOLGA6DP0CG33 693 aa12.45□□□□□ -0.42
EFCAB11-208ENST00000555872 U2AF2P26368 475 aaKnown RBP eCLIP12.45□□□□□ -0.42
EFCAB11-208ENST00000555872 GTF2F1P35269 517 aaKnown RBP eCLIP12.45□□□□□ -0.42
EFCAB11-208ENST00000555872 NOL10Q9BSC4 688 aaKnown RBP12.45□□□□□ -0.42
EFCAB11-208ENST00000555872 BCL2L12Q9HB09 334 aa12.45□□□□□ -0.42
EFCAB11-208ENST00000555872 GOLGA6AQ9NYA3 693 aa12.45□□□□□ -0.42
EFCAB11-208ENST00000555872 ZNF219Q9P2Y4 722 aaPredicted RBP12.45□□□□□ -0.42
EFCAB11-208ENST00000555872 RRP7AQ9Y3A4 280 aaKnown RBP12.45□□□□□ -0.42
EFCAB11-208ENST00000555872 LRSAM1Q6UWE0 723 aa12.44□□□□□ -0.42
EFCAB11-208ENST00000555872 GPT2Q8TD30 523 aa12.44□□□□□ -0.42
EFCAB11-208ENST00000555872 MYO5BQ9ULV0 1848 aa12.44□□□□□ -0.42
EFCAB11-208ENST00000555872 ICE2Q659A1 982 aa12.44□□□□□ -0.42
EFCAB11-208ENST00000555872 PKP1Q13835 747 aa12.43□□□□□ -0.42
EFCAB11-208ENST00000555872 DDX46Q7L014 1031 aaKnown RBP12.43□□□□□ -0.42
EFCAB11-208ENST00000555872 C17orf53Q8N3J3 647 aaPredicted RBP12.43□□□□□ -0.42
EFCAB11-208ENST00000555872 SETBP1Q9Y6X0 1596 aa12.43□□□□□ -0.42
EFCAB11-208ENST00000555872 PIK3C2GO75747 1445 aa12.43□□□□□ -0.42
EFCAB11-208ENST00000555872 GUCY2CP25092 1073 aa12.43□□□□□ -0.42
EFCAB11-208ENST00000555872 NOLC1Q14978 699 aaKnown RBP eCLIP12.43□□□□□ -0.42
EFCAB11-208ENST00000555872 TMEM63CQ9P1W3 806 aa12.43□□□□□ -0.42
EFCAB11-208ENST00000555872 SUFUQ9UMX1 484 aa12.43□□□□□ -0.42
EFCAB11-208ENST00000555872 NEXMIFQ5QGS0 1516 aa12.42□□□□□ -0.42
EFCAB11-208ENST00000555872 PROCA1Q8NCQ7 364 aaPredicted RBP12.42□□□□□ -0.42
EFCAB11-208ENST00000555872 CCDC97Q96F63 343 aaPredicted RBP12.42□□□□□ -0.42
EFCAB11-208ENST00000555872 LNPKQ9C0E8 428 aa12.42□□□□□ -0.42
EFCAB11-208ENST00000555872 TOMM22Q9NS69 142 aa12.42□□□□□ -0.42
EFCAB11-208ENST00000555872 ZFYVE9O95405 1425 aa12.42□□□□□ -0.42
EFCAB11-208ENST00000555872 LRCH2Q5VUJ6 765 aa12.42□□□□□ -0.42
EFCAB11-208ENST00000555872 NUCB2P80303 420 aa12.41□□□□□ -0.42
EFCAB11-208ENST00000555872 CALCOCO1Q9P1Z2 691 aa12.41□□□□□ -0.42
EFCAB11-208ENST00000555872 KIF1CO43896 1103 aaKnown RBP12.41□□□□□ -0.42
EFCAB11-208ENST00000555872 HDAC1Q13547 482 aaPredicted RBP12.41□□□□□ -0.42
EFCAB11-208ENST00000555872 DZIP1LQ8IYY4 767 aaKnown RBP12.41□□□□□ -0.42
EFCAB11-208ENST00000555872 KCTD17Q8N5Z5 321 aa12.41□□□□□ -0.42
EFCAB11-208ENST00000555872 PIBF1Q8WXW3 757 aa12.41□□□□□ -0.42
EFCAB11-208ENST00000555872 KLHL33A6NCF5 533 aa12.4□□□□□ -0.42
EFCAB11-208ENST00000555872 CHAMP1Q96JM3 812 aa12.4□□□□□ -0.42
EFCAB11-208ENST00000555872 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.4□□□□□ -0.425e-8■■■■■ 180.1
EFCAB11-208ENST00000555872 NSFL1CQ9UNZ2 370 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms