RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 ATG3Q9NT62 314 aa26.47■■□□□ 1.83
SUPT16H-203ENST00000555752 ANKRD26Q9UPS8 1709 aa26.46■■□□□ 1.83
SUPT16H-203ENST00000555752 BCS1LQ9Y276 419 aa26.46■■□□□ 1.83
SUPT16H-203ENST00000555752 PHKG2P15735 406 aa26.45■■□□□ 1.82
SUPT16H-203ENST00000555752 WASHC2AQ641Q2 1341 aa26.42■■□□□ 1.82
SUPT16H-203ENST00000555752 APLP1P51693 650 aa26.42■■□□□ 1.82
SUPT16H-203ENST00000555752 IFNL2Q8IZJ0 200 aa26.42■■□□□ 1.82
SUPT16H-203ENST00000555752 SLC4A9Q96Q91 983 aa26.42■■□□□ 1.82
SUPT16H-203ENST00000555752 NMRK2Q9NPI5 230 aa26.42■■□□□ 1.82
SUPT16H-203ENST00000555752 ARHGAP27Q6ZUM4 889 aa26.41■■□□□ 1.82
SUPT16H-203ENST00000555752 DNAJC5GQ8N7S2 189 aa26.41■■□□□ 1.82
SUPT16H-203ENST00000555752 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.41■■□□□ 1.829e-15■■■□□ 17.5
SUPT16H-203ENST00000555752 KDRP35968 1356 aa26.41■■□□□ 1.82
SUPT16H-203ENST00000555752 C10orf71Q711Q0 1435 aa26.4■■□□□ 1.82
SUPT16H-203ENST00000555752 TOMM70O94826 608 aa26.4■■□□□ 1.82
SUPT16H-203ENST00000555752 TGFB2P61812 414 aa26.4■■□□□ 1.82
SUPT16H-203ENST00000555752 DPEP1P16444 411 aa26.39■■□□□ 1.82
SUPT16H-203ENST00000555752 TRAPPC3LQ5T215 181 aa26.39■■□□□ 1.82
SUPT16H-203ENST00000555752 RTCBQ9Y3I0 505 aaKnown RBP26.39■■□□□ 1.82
SUPT16H-203ENST00000555752 ARHGEF1Q92888 912 aaKnown RBP26.38■■□□□ 1.81
SUPT16H-203ENST00000555752 C4AP0C0L4 1744 aa26.37■■□□□ 1.81
SUPT16H-203ENST00000555752 RBM42Q9BTD8 480 aaKnown RBP26.37■■□□□ 1.81
SUPT16H-203ENST00000555752 POLKQ9UBT6 870 aa26.37■■□□□ 1.81
SUPT16H-203ENST00000555752 BRCA1P38398 1863 aaKnown RBP26.36■■□□□ 1.81
SUPT16H-203ENST00000555752 CDCA8Q53HL2 280 aa26.36■■□□□ 1.81
SUPT16H-203ENST00000555752 NLGN1Q8N2Q7 840 aa26.36■■□□□ 1.81
SUPT16H-203ENST00000555752 FCHSD2O94868 740 aa26.35■■□□□ 1.81
SUPT16H-203ENST00000555752 GYS1P13807 737 aa26.35■■□□□ 1.81
SUPT16H-203ENST00000555752 COL5A3P25940 1745 aaPredicted RBP26.35■■□□□ 1.81
SUPT16H-203ENST00000555752 HTRA3P83110 453 aa26.34■■□□□ 1.81
SUPT16H-203ENST00000555752 EIF4A2Q14240 407 aaKnown RBP26.34■■□□□ 1.81
SUPT16H-203ENST00000555752 CCDC87Q9NVE4 849 aa26.33■■□□□ 1.81
SUPT16H-203ENST00000555752 ZNF831Q5JPB2 1677 aa26.32■■□□□ 1.8
SUPT16H-203ENST00000555752 WDR90Q96KV7 1748 aa26.32■■□□□ 1.8
SUPT16H-203ENST00000555752 KCNA3P22001 575 aa26.32■■□□□ 1.8
SUPT16H-203ENST00000555752 TNNT2P45379 298 aaPredicted RBP26.32■■□□□ 1.8
SUPT16H-203ENST00000555752 MYH14Q7Z406 1995 aaKnown RBP26.31■■□□□ 1.8
SUPT16H-203ENST00000555752 RFC4P35249 363 aa26.31■■□□□ 1.8
SUPT16H-203ENST00000555752 C9orf131Q5VYM1 1079 aa26.31■■□□□ 1.8
SUPT16H-203ENST00000555752 RC3H1Q5TC82 1133 aaKnown RBP26.3■■□□□ 1.8
SUPT16H-203ENST00000555752 PARP3Q9Y6F1 533 aa26.3■■□□□ 1.8
SUPT16H-203ENST00000555752 CNTNAP4Q9C0A0 1308 aa26.3■■□□□ 1.8
SUPT16H-203ENST00000555752 RPS6KA4O75676 772 aa26.29■■□□□ 1.8
SUPT16H-203ENST00000555752 ADRA2BP18089 450 aa26.29■■□□□ 1.8
SUPT16H-203ENST00000555752 ARFGEF1Q9Y6D6 1849 aa26.28■■□□□ 1.8
SUPT16H-203ENST00000555752 ERVV-2B6SEH9 535 aa26.28■■□□□ 1.8
SUPT16H-203ENST00000555752 KDM6AO15550 1401 aaPredicted RBP26.28■■□□□ 1.8
SUPT16H-203ENST00000555752 SRP68Q9UHB9 627 aaKnown RBP26.27■■□□□ 1.8
SUPT16H-203ENST00000555752 KCPQ6ZWJ8 1503 aa26.26■■□□□ 1.79
SUPT16H-203ENST00000555752 RBM46Q8TBY0 533 aaKnown RBP26.26■■□□□ 1.79
SUPT16H-203ENST00000555752 DCAF5Q96JK2 942 aa26.25■■□□□ 1.79
SUPT16H-203ENST00000555752 PTCD1O75127 700 aaKnown RBP26.24■■□□□ 1.79
SUPT16H-203ENST00000555752 PIM2Q9P1W9 311 aa26.24■■□□□ 1.79
SUPT16H-203ENST00000555752 CABP4P57796 275 aa26.23■■□□□ 1.79
SUPT16H-203ENST00000555752 DDR1Q08345 913 aa26.23■■□□□ 1.79
SUPT16H-203ENST00000555752 FKBP8Q14318 412 aa26.23■■□□□ 1.79
SUPT16H-203ENST00000555752 C16orf71Q8IYS4 520 aaPredicted RBP26.23■■□□□ 1.79
SUPT16H-203ENST00000555752 ZNF530Q6P9A1 599 aaPredicted RBP26.22■■□□□ 1.79
SUPT16H-203ENST00000555752 PLEKHG2Q9H7P9 1386 aa26.21■■□□□ 1.79
SUPT16H-203ENST00000555752 CHRNA5P30532 468 aa26.21■■□□□ 1.79
SUPT16H-203ENST00000555752 CRKLP46109 303 aaKnown RBP26.21■■□□□ 1.79
SUPT16H-203ENST00000555752 COL13A1Q5TAT6 717 aaPredicted RBP26.21■■□□□ 1.79
SUPT16H-203ENST00000555752 KLRG1Q96E93 195 aa26.21■■□□□ 1.79
SUPT16H-203ENST00000555752 RNF181Q9P0P0 153 aa26.21■■□□□ 1.79
SUPT16H-203ENST00000555752 HSP90AB1P08238 724 aaKnown RBP26.2■■□□□ 1.78
SUPT16H-203ENST00000555752 PLEKHO1Q53GL0 409 aaPredicted RBP26.2■■□□□ 1.78
SUPT16H-203ENST00000555752 DALRD3Q5D0E6 543 aaKnown RBP26.2■■□□□ 1.78
SUPT16H-203ENST00000555752 POLR3GLQ9BT43 218 aa26.2■■□□□ 1.78
SUPT16H-203ENST00000555752 RRAGCQ9HB90 399 aa26.2■■□□□ 1.78
SUPT16H-203ENST00000555752 USP42Q9H9J4 1324 aaKnown RBP26.19■■□□□ 1.78
SUPT16H-203ENST00000555752 TJP1Q07157 1748 aa26.19■■□□□ 1.78
SUPT16H-203ENST00000555752 SBF1O95248 1867 aa26.18■■□□□ 1.78
SUPT16H-203ENST00000555752 FSTL1Q12841 308 aa26.18■■□□□ 1.78
SUPT16H-203ENST00000555752 AEBP1Q8IUX7 1158 aa26.18■■□□□ 1.78
SUPT16H-203ENST00000555752 JMYQ8N9B5 988 aa26.17■■□□□ 1.78
SUPT16H-203ENST00000555752 NFATC2IPQ8NCF5 419 aa26.17■■□□□ 1.78
SUPT16H-203ENST00000555752 KDM2BQ8NHM5 1336 aa26.16■■□□□ 1.78
SUPT16H-203ENST00000555752 MTHFSP49914 203 aa26.16■■□□□ 1.78
SUPT16H-203ENST00000555752 ADAMTS7Q9UKP4 1686 aa26.15■■□□□ 1.78
SUPT16H-203ENST00000555752 POLRMTO00411 1230 aaKnown RBP26.14■■□□□ 1.78
SUPT16H-203ENST00000555752 INTS5Q6P9B9 1019 aaKnown RBP26.14■■□□□ 1.78
SUPT16H-203ENST00000555752 TNRC6CQ9HCJ0 1690 aaKnown RBP26.13■■□□□ 1.77
SUPT16H-203ENST00000555752 CAPN15O75808 1086 aa26.13■■□□□ 1.77
SUPT16H-203ENST00000555752 RASSF7Q02833 373 aa26.13■■□□□ 1.77
SUPT16H-203ENST00000555752 AMOTQ4VCS5 1084 aa26.13■■□□□ 1.77
SUPT16H-203ENST00000555752 PCNTO95613 3336 aa26.12■■□□□ 1.77
SUPT16H-203ENST00000555752 TM4SF1P30408 202 aa26.12■■□□□ 1.77
SUPT16H-203ENST00000555752 C1orf141Q5JVX7 400 aa26.12■■□□□ 1.77
SUPT16H-203ENST00000555752 USPL1Q5W0Q7 1092 aa26.1■■□□□ 1.77
SUPT16H-203ENST00000555752 PRELPP51888 382 aa26.08■■□□□ 1.77
SUPT16H-203ENST00000555752 DNAJC10Q8IXB1 793 aa26.08■■□□□ 1.77
SUPT16H-203ENST00000555752 SULT6B1Q6IMI4 303 aa26.07■■□□□ 1.76
SUPT16H-203ENST00000555752 SMC1BQ8NDV3 1235 aa26.07■■□□□ 1.76
SUPT16H-203ENST00000555752 SCN11AQ9UI33 1791 aa26.07■■□□□ 1.76
SUPT16H-203ENST00000555752 AFDNP55196 1824 aaKnown RBP26.07■■□□□ 1.76
SUPT16H-203ENST00000555752 ZPR1O75312 459 aa26.05■■□□□ 1.76
SUPT16H-203ENST00000555752 PANK3Q9H999 370 aa26.05■■□□□ 1.76
SUPT16H-203ENST00000555752 NFIXQ14938 502 aa26.04■■□□□ 1.76
SUPT16H-203ENST00000555752 TNS4Q8IZW8 715 aa26.04■■□□□ 1.76
SUPT16H-203ENST00000555752 SOS1Q07889 1333 aaPredicted RBP26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 273.4 ms