RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 LINC00116Q8NCU8 138 aa20.87■□□□□ 0.93
SNX6-205ENST00000555648 QSER1Q2KHR3 1735 aa20.87■□□□□ 0.93
SNX6-205ENST00000555648 TOGARAM1Q9Y4F4 1720 aa20.87■□□□□ 0.93
SNX6-205ENST00000555648 DIAPH1O60610 1272 aaKnown RBP20.85■□□□□ 0.93
SNX6-205ENST00000555648 ITPK1Q13572 414 aa20.85■□□□□ 0.93
SNX6-205ENST00000555648 C5P01031 1676 aa20.84■□□□□ 0.93
SNX6-205ENST00000555648 HMOX1P09601 288 aa20.83■□□□□ 0.93
SNX6-205ENST00000555648 RTCBQ9Y3I0 505 aaKnown RBP20.83■□□□□ 0.93
SNX6-205ENST00000555648 KDRP35968 1356 aa20.83■□□□□ 0.92
SNX6-205ENST00000555648 AKAP4Q5JQC9 854 aa20.82■□□□□ 0.92
SNX6-205ENST00000555648 SMIM5Q71RC9 77 aa20.82■□□□□ 0.92
SNX6-205ENST00000555648 NFATC2IPQ8NCF5 419 aa20.82■□□□□ 0.92
SNX6-205ENST00000555648 NLGN2Q8NFZ4 835 aa20.82■□□□□ 0.92
SNX6-205ENST00000555648 ITGB4P16144 1822 aa20.82■□□□□ 0.92
SNX6-205ENST00000555648 C4BP0C0L5 1744 aa20.81■□□□□ 0.92
SNX6-205ENST00000555648 TRAPPC3LQ5T215 181 aa20.81■□□□□ 0.92
SNX6-205ENST00000555648 CD2APQ9Y5K6 639 aa20.81■□□□□ 0.92
SNX6-205ENST00000555648 KDM6AO15550 1401 aaPredicted RBP20.8■□□□□ 0.92
SNX6-205ENST00000555648 PTCD1O75127 700 aaKnown RBP20.8■□□□□ 0.92
SNX6-205ENST00000555648 AMIGO3Q86WK7 504 aa20.8■□□□□ 0.92
SNX6-205ENST00000555648 NPC1L1Q9UHC9 1359 aa20.8■□□□□ 0.92
SNX6-205ENST00000555648 TUBGCP6Q96RT7 1819 aa20.8■□□□□ 0.92
SNX6-205ENST00000555648 U2SURPO15042 1029 aaKnown RBP20.79■□□□□ 0.92
SNX6-205ENST00000555648 GRIN3BO60391 1043 aa20.78■□□□□ 0.92
SNX6-205ENST00000555648 RC3H1Q5TC82 1133 aaKnown RBP20.77■□□□□ 0.92
SNX6-205ENST00000555648 CFAP53Q96M91 514 aa20.77■□□□□ 0.92
SNX6-205ENST00000555648 ADRA2BP18089 450 aa20.76■□□□□ 0.91
SNX6-205ENST00000555648 RFC4P35249 363 aa20.76■□□□□ 0.91
SNX6-205ENST00000555648 SLC4A9Q96Q91 983 aa20.76■□□□□ 0.91
SNX6-205ENST00000555648 CNTNAP4Q9C0A0 1308 aa20.76■□□□□ 0.91
SNX6-205ENST00000555648 RPS6KA4O75676 772 aa20.74■□□□□ 0.91
SNX6-205ENST00000555648 NLGN1Q8N2Q7 840 aa20.74■□□□□ 0.91
SNX6-205ENST00000555648 ZNF784Q8NCA9 323 aaPredicted RBP20.74■□□□□ 0.91
SNX6-205ENST00000555648 SLC52A2Q9HAB3 445 aa20.74■□□□□ 0.91
SNX6-205ENST00000555648 TAF1LQ8IZX4 1826 aa20.74■□□□□ 0.91
SNX6-205ENST00000555648 RNMTO43148 476 aaKnown RBP20.73■□□□□ 0.91
SNX6-205ENST00000555648 MTHFSDQ2M296 383 aaKnown RBP20.73■□□□□ 0.91
SNX6-205ENST00000555648 LGR6Q9HBX8 967 aa20.73■□□□□ 0.91
SNX6-205ENST00000555648 COL24A1Q17RW2 1714 aa20.73■□□□□ 0.91
SNX6-205ENST00000555648 MMP10P09238 476 aa20.72■□□□□ 0.91
SNX6-205ENST00000555648 ARHGEF1Q92888 912 aaKnown RBP20.72■□□□□ 0.91
SNX6-205ENST00000555648 CRKLP46109 303 aaKnown RBP20.71■□□□□ 0.91
SNX6-205ENST00000555648 NUDCQ9Y266 331 aa20.71■□□□□ 0.91
SNX6-205ENST00000555648 YBX3P16989 372 aaKnown RBP eCLIP20.7■□□□□ 0.95e-10■■□□□ 13
SNX6-205ENST00000555648 GAS2L2Q8NHY3 880 aa20.7■□□□□ 0.9
SNX6-205ENST00000555648 TTC5Q8N0Z6 440 aa20.68■□□□□ 0.9
SNX6-205ENST00000555648 PARP3Q9Y6F1 533 aa20.68■□□□□ 0.9
SNX6-205ENST00000555648 UBR3Q6ZT12 1888 aa20.68■□□□□ 0.9
SNX6-205ENST00000555648 TEFQ10587 303 aa20.67■□□□□ 0.9
SNX6-205ENST00000555648 SLC39A6Q13433 755 aa20.67■□□□□ 0.9
SNX6-205ENST00000555648 CCDC87Q9NVE4 849 aa20.67■□□□□ 0.9
SNX6-205ENST00000555648 GNAT3A8MTJ3 354 aa20.66■□□□□ 0.9
SNX6-205ENST00000555648 DNAJC10Q8IXB1 793 aa20.66■□□□□ 0.9
SNX6-205ENST00000555648 WWC3Q9ULE0 1092 aa20.66■□□□□ 0.9
SNX6-205ENST00000555648 GYS1P13807 737 aa20.65■□□□□ 0.9
SNX6-205ENST00000555648 ZPR1O75312 459 aa20.64■□□□□ 0.89
SNX6-205ENST00000555648 U2AF1L5P0DN76 240 aaPredicted RBP20.64■□□□□ 0.89
SNX6-205ENST00000555648 U2AF1Q01081 240 aaKnown RBP eCLIP20.64■□□□□ 0.89
SNX6-205ENST00000555648 PPP2R1AP30153 589 aa20.63■□□□□ 0.89
SNX6-205ENST00000555648 PRKAR2BP31323 418 aa20.63■□□□□ 0.89
SNX6-205ENST00000555648 COL3A1P02461 1466 aaPredicted RBP20.62■□□□□ 0.89
SNX6-205ENST00000555648 ZNF831Q5JPB2 1677 aa20.62■□□□□ 0.89
SNX6-205ENST00000555648 TGFB2P61812 414 aa20.62■□□□□ 0.89
SNX6-205ENST00000555648 INTS5Q6P9B9 1019 aaKnown RBP20.62■□□□□ 0.89
SNX6-205ENST00000555648 VSIG10Q8N0Z9 540 aa20.62■□□□□ 0.89
SNX6-205ENST00000555648 SRP68Q9UHB9 627 aaKnown RBP20.62■□□□□ 0.89
SNX6-205ENST00000555648 STARD3NLO95772 234 aa20.61■□□□□ 0.89
SNX6-205ENST00000555648 USP42Q9H9J4 1324 aaKnown RBP20.6■□□□□ 0.89
SNX6-205ENST00000555648 CYP19A1P11511 503 aaPredicted RBP20.6■□□□□ 0.89
SNX6-205ENST00000555648 RTF1Q92541 710 aaKnown RBP20.6■□□□□ 0.89
SNX6-205ENST00000555648 MRC1P22897 1456 aa20.6■□□□□ 0.89
SNX6-205ENST00000555648 NEFMP07197 916 aa20.59■□□□□ 0.89
SNX6-205ENST00000555648 IL17REQ8NFR9 667 aa20.59■□□□□ 0.89
SNX6-205ENST00000555648 RSPH6AQ9H0K4 717 aa20.59■□□□□ 0.89
SNX6-205ENST00000555648 FKBP8Q14318 412 aa20.58■□□□□ 0.89
SNX6-205ENST00000555648 NPM2Q86SE8 214 aaKnown RBP20.58■□□□□ 0.89
SNX6-205ENST00000555648 SCN11AQ9UI33 1791 aa20.58■□□□□ 0.89
SNX6-205ENST00000555648 CHD4Q14839 1912 aa20.58■□□□□ 0.88
SNX6-205ENST00000555648 SOS1Q07889 1333 aaPredicted RBP20.57■□□□□ 0.88
SNX6-205ENST00000555648 A0A0G2JLW4 131 aa20.57■□□□□ 0.88
SNX6-205ENST00000555648 GIGYF1O75420 1035 aaPredicted RBP20.57■□□□□ 0.88
SNX6-205ENST00000555648 FCHSD2O94868 740 aa20.57■□□□□ 0.88
SNX6-205ENST00000555648 CANXP27824 592 aaKnown RBP20.57■□□□□ 0.88
SNX6-205ENST00000555648 USPL1Q5W0Q7 1092 aa20.57■□□□□ 0.88
SNX6-205ENST00000555648 ZNF790Q6PG37 636 aa20.57■□□□□ 0.88
SNX6-205ENST00000555648 PHACTR3Q96KR7 559 aa20.57■□□□□ 0.88
SNX6-205ENST00000555648 TEX13AQ9BXU3 409 aaPredicted RBP20.57■□□□□ 0.88
SNX6-205ENST00000555648 BCS1LQ9Y276 419 aa20.57■□□□□ 0.88
SNX6-205ENST00000555648 ZBTB1Q9Y2K1 713 aa20.57■□□□□ 0.88
SNX6-205ENST00000555648 CICQ96RK0 1608 aaPredicted RBP20.56■□□□□ 0.88
SNX6-205ENST00000555648 COL5A3P25940 1745 aaPredicted RBP20.56■□□□□ 0.88
SNX6-205ENST00000555648 BTBD11A6QL63 1104 aa20.55■□□□□ 0.88
SNX6-205ENST00000555648 FMNL2Q96PY5 1086 aa20.55■□□□□ 0.88
SNX6-205ENST00000555648 C10orf71Q711Q0 1435 aa20.54■□□□□ 0.88
SNX6-205ENST00000555648 A0A087WZG4 1122 aa20.54■□□□□ 0.88
SNX6-205ENST00000555648 DPEP1P16444 411 aa20.54■□□□□ 0.88
SNX6-205ENST00000555648 ZNF496Q96IT1 587 aaPredicted RBP20.54■□□□□ 0.88
SNX6-205ENST00000555648 NARFQ9UHQ1 456 aa20.54■□□□□ 0.88
SNX6-205ENST00000555648 COL15A1P39059 1388 aa20.54■□□□□ 0.88
SNX6-205ENST00000555648 C1QTNF8P60827 252 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms