RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 HDGFL1Q5TGJ6 251 aa5.78□□□□□ -1.48
KTN1-220ENST00000555172 NEDD1Q8NHV4 660 aa5.78□□□□□ -1.48
KTN1-220ENST00000555172 LRRN4Q8WUT4 740 aa5.78□□□□□ -1.48
KTN1-220ENST00000555172 SLC10A4Q96EP9 437 aa5.78□□□□□ -1.48
KTN1-220ENST00000555172 OCSTAMPQ9BR26 566 aa5.78□□□□□ -1.48
KTN1-220ENST00000555172 PDE4CQ08493 712 aa5.77□□□□□ -1.49
KTN1-220ENST00000555172 BEND7Q8N7W2 519 aaPredicted RBP5.77□□□□□ -1.49
KTN1-220ENST00000555172 ZNF784Q8NCA9 323 aaPredicted RBP5.77□□□□□ -1.49
KTN1-220ENST00000555172 PNMA1Q8ND90 353 aa5.77□□□□□ -1.49
KTN1-220ENST00000555172 ACDQ96AP0 544 aa5.77□□□□□ -1.49
KTN1-220ENST00000555172 TRIM34Q9BYJ4 488 aa5.77□□□□□ -1.49
KTN1-220ENST00000555172 ENAMQ9NRM1 1142 aa5.77□□□□□ -1.49
KTN1-220ENST00000555172 IVNS1ABPQ9Y6Y0 642 aa5.77□□□□□ -1.49
KTN1-220ENST00000555172 DBN1Q16643 649 aa5.76□□□□□ -1.49
KTN1-220ENST00000555172 ZNF837Q96EG3 531 aaPredicted RBP5.76□□□□□ -1.49
KTN1-220ENST00000555172 IGSF5Q9NSI5 407 aa5.76□□□□□ -1.49
KTN1-220ENST00000555172 FURINP09958 794 aa5.76□□□□□ -1.49
KTN1-220ENST00000555172 DHX9Q08211 1270 aaKnown RBP5.76□□□□□ -1.49
KTN1-220ENST00000555172 KCNA1Q09470 495 aa5.76□□□□□ -1.49
KTN1-220ENST00000555172 LYSMD3Q7Z3D4 306 aa5.76□□□□□ -1.49
KTN1-220ENST00000555172 ZBTB33Q86T24 672 aa5.76□□□□□ -1.49
KTN1-220ENST00000555172 LILRA1O75019 489 aa5.75□□□□□ -1.49
KTN1-220ENST00000555172 BRD1O95696 1058 aa5.75□□□□□ -1.49
KTN1-220ENST00000555172 BCRP11274 1271 aa5.75□□□□□ -1.49
KTN1-220ENST00000555172 VAC14Q08AM6 782 aa5.75□□□□□ -1.49
KTN1-220ENST00000555172 CCDC125Q86Z20 511 aa5.75□□□□□ -1.49
KTN1-220ENST00000555172 CWC22Q9HCG8 908 aaKnown RBP5.75□□□□□ -1.49
KTN1-220ENST00000555172 MBIPQ9NS73 344 aa5.75□□□□□ -1.49
KTN1-220ENST00000555172 KRBA1A5PL33 1030 aa5.75□□□□□ -1.49
KTN1-220ENST00000555172 ADH1AP07327 375 aa5.75□□□□□ -1.49
KTN1-220ENST00000555172 SOX11P35716 441 aa5.75□□□□□ -1.49
KTN1-220ENST00000555172 PTGIRP43119 386 aa5.75□□□□□ -1.49
KTN1-220ENST00000555172 SNRPNP63162 240 aaKnown RBP5.75□□□□□ -1.49
KTN1-220ENST00000555172 PDXDC2PQ6P474 469 aa5.75□□□□□ -1.49
KTN1-220ENST00000555172 RIPOR1Q6ZS17 1223 aa5.75□□□□□ -1.49
KTN1-220ENST00000555172 GTPBP3Q969Y2 492 aaKnown RBP5.75□□□□□ -1.49
KTN1-220ENST00000555172 BRD2P25440 801 aaKnown RBP5.74□□□□□ -1.49
KTN1-220ENST00000555172 BAG6P46379 1132 aa5.74□□□□□ -1.49
KTN1-220ENST00000555172 NR6A1Q15406 480 aa5.74□□□□□ -1.49
KTN1-220ENST00000555172 SND1Q7KZF4 910 aaKnown RBP eCLIP5.74□□□□□ -1.49
KTN1-220ENST00000555172 GPKOWQ92917 476 aaPredicted RBP eCLIP5.74□□□□□ -1.49
KTN1-220ENST00000555172 KRTAP4-12Q9BQ66 201 aa5.74□□□□□ -1.49
KTN1-220ENST00000555172 FKBPLQ9UIM3 349 aa5.74□□□□□ -1.49
KTN1-220ENST00000555172 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.73□□□□□ -1.49
KTN1-220ENST00000555172 ERVH48-1M5A8F1 160 aa5.73□□□□□ -1.49
KTN1-220ENST00000555172 PODNQ7Z5L7 613 aa5.73□□□□□ -1.49
KTN1-220ENST00000555172 PBXIP1Q96AQ6 731 aa5.73□□□□□ -1.49
KTN1-220ENST00000555172 SEMA3FQ13275 785 aa5.73□□□□□ -1.49
KTN1-220ENST00000555172 FAM9AQ8IZU1 332 aaPredicted RBP5.73□□□□□ -1.49
KTN1-220ENST00000555172 ADAM32Q8TC27 787 aa5.73□□□□□ -1.49
KTN1-220ENST00000555172 SMARCA5O60264 1052 aaPredicted RBP5.72□□□□□ -1.49
KTN1-220ENST00000555172 TRIM22Q8IYM9 498 aa5.72□□□□□ -1.49
KTN1-220ENST00000555172 ADAMTS19Q8TE59 1207 aa5.72□□□□□ -1.49
KTN1-220ENST00000555172 EPS8L1Q8TE68 723 aa5.72□□□□□ -1.49
KTN1-220ENST00000555172 KIAA1522Q9P206 1035 aaPredicted RBP5.72□□□□□ -1.49
KTN1-220ENST00000555172 PATL2C9JE40 543 aaKnown RBP5.71□□□□□ -1.49
KTN1-220ENST00000555172 GPR37L1O60883 481 aa5.71□□□□□ -1.49
KTN1-220ENST00000555172 RFX1P22670 979 aa5.71□□□□□ -1.49
KTN1-220ENST00000555172 EIF4G2P78344 907 aaKnown RBP eCLIP5.71□□□□□ -1.49
KTN1-220ENST00000555172 GAS2L1Q99501 681 aaPredicted RBP5.71□□□□□ -1.49
KTN1-220ENST00000555172 PPP1R12CQ9BZL4 782 aa5.71□□□□□ -1.49
KTN1-220ENST00000555172 ALG2Q9H553 416 aa5.71□□□□□ -1.49
KTN1-220ENST00000555172 CYLDQ9NQC7 956 aa5.71□□□□□ -1.49
KTN1-220ENST00000555172 CDV3Q9UKY7 258 aaKnown RBP5.71□□□□□ -1.49
KTN1-220ENST00000555172 KRTAP4-8A0A0G2JLE6 195 aa5.71□□□□□ -1.5
KTN1-220ENST00000555172 COL8A1P27658 744 aa5.71□□□□□ -1.5
KTN1-220ENST00000555172 CSB-PGBD3P0DP91 1061 aa5.7□□□□□ -1.5
KTN1-220ENST00000555172 C1orf229Q6ZS94 237 aaPredicted RBP5.7□□□□□ -1.5
KTN1-220ENST00000555172 KRTAP9-9Q9BYP9 154 aa5.7□□□□□ -1.5
KTN1-220ENST00000555172 KRTAP9-4Q9BYQ2 154 aa5.7□□□□□ -1.5
KTN1-220ENST00000555172 PALM3A6NDB9 673 aaPredicted RBP5.69□□□□□ -1.5
KTN1-220ENST00000555172 SHISA8B8ZZ34 492 aa5.69□□□□□ -1.5
KTN1-220ENST00000555172 POU4F2Q12837 409 aa5.69□□□□□ -1.5
KTN1-220ENST00000555172 CFAP70Q5T0N1 1121 aa5.69□□□□□ -1.5
KTN1-220ENST00000555172 LMOD1P29536 600 aaPredicted RBP5.69□□□□□ -1.5
KTN1-220ENST00000555172 RNF144AP50876 292 aaPredicted RBP5.69□□□□□ -1.5
KTN1-220ENST00000555172 FOXR1Q6PIV2 292 aa5.69□□□□□ -1.5
KTN1-220ENST00000555172 TFIP11Q9UBB9 837 aaKnown RBP5.69□□□□□ -1.5
KTN1-220ENST00000555172 MEN1O00255 615 aa5.68□□□□□ -1.5
KTN1-220ENST00000555172 OIP5O43482 229 aa5.68□□□□□ -1.5
KTN1-220ENST00000555172 MX2P20592 715 aa5.68□□□□□ -1.5
KTN1-220ENST00000555172 PTK2Q05397 1052 aa5.68□□□□□ -1.5
KTN1-220ENST00000555172 NR1H3Q13133 447 aa5.68□□□□□ -1.5
KTN1-220ENST00000555172 MRRFQ96E11 262 aaKnown RBP5.68□□□□□ -1.5
KTN1-220ENST00000555172 SUV39H2Q9H5I1 410 aa5.67□□□□□ -1.5
KTN1-220ENST00000555172 USTQ9Y2C2 406 aa5.67□□□□□ -1.5
KTN1-220ENST00000555172 RBM47A0AV96 593 aaKnown RBP5.67□□□□□ -1.5
KTN1-220ENST00000555172 UBE2Q2Q8WVN8 375 aa5.67□□□□□ -1.5
KTN1-220ENST00000555172 ZC3H4Q9UPT8 1303 aaKnown RBP5.67□□□□□ -1.5
KTN1-220ENST00000555172 ZBBXA8MT70 800 aa5.66□□□□□ -1.5
KTN1-220ENST00000555172 ITGB7P26010 798 aa5.66□□□□□ -1.5
KTN1-220ENST00000555172 NBPF20Q3BBV1 942 aa5.66□□□□□ -1.5
KTN1-220ENST00000555172 ALYREFQ86V81 257 aaKnown RBP5.66□□□□□ -1.5
KTN1-220ENST00000555172 DZIP3Q86Y13 1208 aaKnown RBP5.66□□□□□ -1.5
KTN1-220ENST00000555172 THBS1P07996 1170 aa5.66□□□□□ -1.5
KTN1-220ENST00000555172 TXNDC2Q86VQ3 553 aa5.66□□□□□ -1.5
KTN1-220ENST00000555172 ZNF592Q92610 1267 aa5.66□□□□□ -1.5
KTN1-220ENST00000555172 TRERF1Q96PN7 1200 aa5.66□□□□□ -1.5
KTN1-220ENST00000555172 UCN2Q96RP3 112 aa5.66□□□□□ -1.5
KTN1-220ENST00000555172 OXCT2Q9BYC2 517 aaPredicted RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms