RNA–Protein interactions for RNA: ENST00000554844.1

TMEM253-204, Transcript of transmembrane protein 253, humanhuman

TSL 4

Gene TMEM253, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-204ENST00000554844 IFFO2Q5TF58 517 aa13.33□□□□□ -0.28
TMEM253-204ENST00000554844 POLR3GLQ9BT43 218 aa13.33□□□□□ -0.28
TMEM253-204ENST00000554844 NCAPD2Q15021 1401 aa13.32□□□□□ -0.28
TMEM253-204ENST00000554844 HSPA6P17066 643 aa13.32□□□□□ -0.28
TMEM253-204ENST00000554844 EYA1Q99502 592 aa13.32□□□□□ -0.28
TMEM253-204ENST00000554844 CARD14Q9BXL6 1004 aa13.32□□□□□ -0.28
TMEM253-204ENST00000554844 RTCBQ9Y3I0 505 aaKnown RBP13.32□□□□□ -0.28
TMEM253-204ENST00000554844 ANKRD26Q9UPS8 1709 aa13.31□□□□□ -0.28
TMEM253-204ENST00000554844 HSP90AB1P08238 724 aaKnown RBP13.31□□□□□ -0.28
TMEM253-204ENST00000554844 MMP10P09238 476 aa13.31□□□□□ -0.28
TMEM253-204ENST00000554844 PHKG2P15735 406 aa13.31□□□□□ -0.28
TMEM253-204ENST00000554844 SAMD1Q6SPF0 538 aaPredicted RBP13.31□□□□□ -0.28
TMEM253-204ENST00000554844 SMIM5Q71RC9 77 aa13.31□□□□□ -0.28
TMEM253-204ENST00000554844 AMIGO3Q86WK7 504 aa13.31□□□□□ -0.28
TMEM253-204ENST00000554844 ASAP1Q9ULH1 1129 aa13.31□□□□□ -0.28
TMEM253-204ENST00000554844 MAP2P11137 1827 aaKnown RBP13.31□□□□□ -0.28
TMEM253-204ENST00000554844 TRAPPC3LQ5T215 181 aa13.3□□□□□ -0.28
TMEM253-204ENST00000554844 RBM42Q9BTD8 480 aaKnown RBP13.3□□□□□ -0.28
TMEM253-204ENST00000554844 PLEKHG2Q9H7P9 1386 aa13.3□□□□□ -0.28
TMEM253-204ENST00000554844 TNNT2P45379 298 aaPredicted RBP13.29□□□□□ -0.28
TMEM253-204ENST00000554844 ITPK1Q13572 414 aa13.29□□□□□ -0.28
TMEM253-204ENST00000554844 NLGN1Q8N2Q7 840 aa13.29□□□□□ -0.28
TMEM253-204ENST00000554844 CCDC87Q9NVE4 849 aa13.29□□□□□ -0.28
TMEM253-204ENST00000554844 BCS1LQ9Y276 419 aa13.29□□□□□ -0.28
TMEM253-204ENST00000554844 CEP350Q5VT06 3117 aa13.28□□□□□ -0.28
TMEM253-204ENST00000554844 RFC4P35249 363 aa13.28□□□□□ -0.28
TMEM253-204ENST00000554844 TGFB2P61812 414 aa13.28□□□□□ -0.28
TMEM253-204ENST00000554844 PLEKHO1Q53GL0 409 aaPredicted RBP13.28□□□□□ -0.28
TMEM253-204ENST00000554844 ATG3Q9NT62 314 aa13.28□□□□□ -0.28
TMEM253-204ENST00000554844 POLKQ9UBT6 870 aa13.28□□□□□ -0.28
TMEM253-204ENST00000554844 PARP3Q9Y6F1 533 aa13.28□□□□□ -0.28
TMEM253-204ENST00000554844 ERVV-2B6SEH9 535 aa13.27□□□□□ -0.29
TMEM253-204ENST00000554844 EIF4A2Q14240 407 aaKnown RBP13.27□□□□□ -0.29
TMEM253-204ENST00000554844 DCAF5Q96JK2 942 aa13.27□□□□□ -0.29
TMEM253-204ENST00000554844 CICQ96RK0 1608 aaPredicted RBP13.27□□□□□ -0.29
TMEM253-204ENST00000554844 PXDNLA1KZ92 1463 aa13.26□□□□□ -0.29
TMEM253-204ENST00000554844 CABP4P57796 275 aa13.26□□□□□ -0.29
TMEM253-204ENST00000554844 C1orf141Q5JVX7 400 aa13.26□□□□□ -0.29
TMEM253-204ENST00000554844 ARHGAP27Q6ZUM4 889 aa13.26□□□□□ -0.29
TMEM253-204ENST00000554844 U3KPZ7 1027 aaPredicted RBP13.26□□□□□ -0.29
TMEM253-204ENST00000554844 CNTNAP4Q9C0A0 1308 aa13.25□□□□□ -0.29
TMEM253-204ENST00000554844 FCHSD2O94868 740 aa13.25□□□□□ -0.29
TMEM253-204ENST00000554844 APLP1P51693 650 aa13.25□□□□□ -0.29
TMEM253-204ENST00000554844 AMOTQ4VCS5 1084 aa13.25□□□□□ -0.29
TMEM253-204ENST00000554844 RC3H1Q5TC82 1133 aaKnown RBP13.25□□□□□ -0.29
TMEM253-204ENST00000554844 ZNF530Q6P9A1 599 aaPredicted RBP13.25□□□□□ -0.29
TMEM253-204ENST00000554844 C16orf71Q8IYS4 520 aaPredicted RBP13.25□□□□□ -0.29
TMEM253-204ENST00000554844 TIMELESSQ9UNS1 1208 aa13.25□□□□□ -0.29
TMEM253-204ENST00000554844 C10orf71Q711Q0 1435 aa13.24□□□□□ -0.29
TMEM253-204ENST00000554844 KDRP35968 1356 aa13.24□□□□□ -0.29
TMEM253-204ENST00000554844 A0A0G2JLW4 131 aa13.24□□□□□ -0.29
TMEM253-204ENST00000554844 KIF3CO14782 793 aa13.24□□□□□ -0.29
TMEM253-204ENST00000554844 TRIM26Q12899 539 aaPredicted RBP13.24□□□□□ -0.29
TMEM253-204ENST00000554844 KIF13BQ9NQT8 1826 aa13.24□□□□□ -0.29
TMEM253-204ENST00000554844 N4BP2Q86UW6 1770 aaPredicted RBP13.24□□□□□ -0.29
TMEM253-204ENST00000554844 RPS6KA4O75676 772 aa13.23□□□□□ -0.29
TMEM253-204ENST00000554844 ARHGEF1Q92888 912 aaKnown RBP13.23□□□□□ -0.29
TMEM253-204ENST00000554844 ZNF831Q5JPB2 1677 aa13.23□□□□□ -0.29
TMEM253-204ENST00000554844 C4AP0C0L4 1744 aa13.22□□□□□ -0.29
TMEM253-204ENST00000554844 TOMM70O94826 608 aa13.22□□□□□ -0.29
TMEM253-204ENST00000554844 GYS1P13807 737 aa13.22□□□□□ -0.29
TMEM253-204ENST00000554844 DPEP1P16444 411 aa13.22□□□□□ -0.29
TMEM253-204ENST00000554844 MTHFSP49914 203 aa13.22□□□□□ -0.29
TMEM253-204ENST00000554844 PTCD1O75127 700 aaKnown RBP13.21□□□□□ -0.29
TMEM253-204ENST00000554844 PIM2Q9P1W9 311 aa13.21□□□□□ -0.29
TMEM253-204ENST00000554844 COL5A3P25940 1745 aaPredicted RBP13.21□□□□□ -0.3
TMEM253-204ENST00000554844 MORC1Q86VD1 984 aa13.2□□□□□ -0.3
TMEM253-204ENST00000554844 KDM2BQ8NHM5 1336 aa13.19□□□□□ -0.3
TMEM253-204ENST00000554844 CRKLP46109 303 aaKnown RBP13.19□□□□□ -0.3
TMEM253-204ENST00000554844 EIF4G2P78344 907 aaKnown RBP eCLIP13.19□□□□□ -0.3
TMEM253-204ENST00000554844 DALRD3Q5D0E6 543 aaKnown RBP13.19□□□□□ -0.3
TMEM253-204ENST00000554844 C9orf131Q5VYM1 1079 aa13.19□□□□□ -0.3
TMEM253-204ENST00000554844 SLC4A9Q96Q91 983 aa13.19□□□□□ -0.3
TMEM253-204ENST00000554844 KDM6AO15550 1401 aaPredicted RBP13.19□□□□□ -0.3
TMEM253-204ENST00000554844 KIAA1551Q9HCM1 1747 aa13.19□□□□□ -0.3
TMEM253-204ENST00000554844 ZPR1O75312 459 aa13.18□□□□□ -0.3
TMEM253-204ENST00000554844 PANK3Q9H999 370 aa13.18□□□□□ -0.3
TMEM253-204ENST00000554844 CLSPNQ9HAW4 1339 aa13.17□□□□□ -0.3
TMEM253-204ENST00000554844 NFATC2IPQ8NCF5 419 aa13.17□□□□□ -0.3
TMEM253-204ENST00000554844 RBM46Q8TBY0 533 aaKnown RBP13.17□□□□□ -0.3
TMEM253-204ENST00000554844 NMRK2Q9NPI5 230 aa13.17□□□□□ -0.3
TMEM253-204ENST00000554844 RNF181Q9P0P0 153 aa13.17□□□□□ -0.3
TMEM253-204ENST00000554844 ARFGEF1Q9Y6D6 1849 aa13.17□□□□□ -0.3
TMEM253-204ENST00000554844 USP42Q9H9J4 1324 aaKnown RBP13.16□□□□□ -0.3
TMEM253-204ENST00000554844 SULT6B1Q6IMI4 303 aa13.16□□□□□ -0.3
TMEM253-204ENST00000554844 SRP68Q9UHB9 627 aaKnown RBP13.16□□□□□ -0.3
TMEM253-204ENST00000554844 KNSTRNQ9Y448 316 aa13.16□□□□□ -0.3
TMEM253-204ENST00000554844 BRCA1P38398 1863 aaKnown RBP13.15□□□□□ -0.3
TMEM253-204ENST00000554844 FKBP8Q14318 412 aa13.15□□□□□ -0.3
TMEM253-204ENST00000554844 AEBP1Q8IUX7 1158 aa13.15□□□□□ -0.3
TMEM253-204ENST00000554844 MYH14Q7Z406 1995 aaKnown RBP13.14□□□□□ -0.31
TMEM253-204ENST00000554844 FSTL1Q12841 308 aa13.14□□□□□ -0.31
TMEM253-204ENST00000554844 AKAP4Q5JQC9 854 aa13.14□□□□□ -0.31
TMEM253-204ENST00000554844 PCGF6Q9BYE7 350 aa13.14□□□□□ -0.31
TMEM253-204ENST00000554844 HSPA5P11021 654 aaKnown RBP13.13□□□□□ -0.31
TMEM253-204ENST00000554844 KCNA3P22001 575 aa13.13□□□□□ -0.31
TMEM253-204ENST00000554844 TJP1Q07157 1748 aa13.13□□□□□ -0.31
TMEM253-204ENST00000554844 WDR90Q96KV7 1748 aa13.13□□□□□ -0.31
TMEM253-204ENST00000554844 KCPQ6ZWJ8 1503 aa13.13□□□□□ -0.31
TMEM253-204ENST00000554844 CHRNA5P30532 468 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms