RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 POLR3DP05423 398 aaPredicted RBP3.89□□□□□ -1.79
SYNE2-212ENST00000554584 CCDC8Q9H0W5 538 aaPredicted RBP3.89□□□□□ -1.79
SYNE2-212ENST00000554584 RMDN2Q96LZ7 410 aa3.89□□□□□ -1.79
SYNE2-212ENST00000554584 HOOK1Q9UJC3 728 aaKnown RBP3.89□□□□□ -1.79
SYNE2-212ENST00000554584 EZRP15311 586 aaKnown RBP3.89□□□□□ -1.79
SYNE2-212ENST00000554584 DEF6Q9H4E7 631 aa3.89□□□□□ -1.79
SYNE2-212ENST00000554584 SAP30BPQ9UHR5 308 aaKnown RBP3.89□□□□□ -1.79
SYNE2-212ENST00000554584 FERMT2Q96AC1 680 aa3.89□□□□□ -1.79
SYNE2-212ENST00000554584 TERF2IPQ9NYB0 399 aa3.89□□□□□ -1.79
SYNE2-212ENST00000554584 CFAP45Q9UL16 551 aa3.89□□□□□ -1.79
SYNE2-212ENST00000554584 ERBB3P21860 1342 aa3.89□□□□□ -1.79
SYNE2-212ENST00000554584 PSMD6Q15008 389 aa3.89□□□□□ -1.79
SYNE2-212ENST00000554584 SAMM50Q9Y512 469 aa3.89□□□□□ -1.79
SYNE2-212ENST00000554584 FAM160A1Q05DH4 1040 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 NAA25Q14CX7 972 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 IRAK4Q9NWZ3 460 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 TMOD2Q9NZR1 351 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 ANKIB1Q9P2G1 1089 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 TFIP11Q9UBB9 837 aaKnown RBP3.88□□□□□ -1.79
SYNE2-212ENST00000554584 GPS2Q13227 327 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 CDCA8Q53HL2 280 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 FBXO31Q5XUX0 539 aaPredicted RBP3.88□□□□□ -1.79
SYNE2-212ENST00000554584 OLFM4Q6UX06 510 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 CFAP70Q5T0N1 1121 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 SASS6Q6UVJ0 657 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 PFDN4Q9NQP4 134 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 IDH1O75874 414 aaKnown RBP3.88□□□□□ -1.79
SYNE2-212ENST00000554584 RBM28Q9NW13 759 aaKnown RBP3.88□□□□□ -1.79
SYNE2-212ENST00000554584 CPLX2Q6PUV4 134 aaKnown RBP3.88□□□□□ -1.79
SYNE2-212ENST00000554584 FAM43AQ8N2R8 423 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 DACT3Q96B18 629 aaPredicted RBP3.88□□□□□ -1.79
SYNE2-212ENST00000554584 TDO2P48775 406 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 SLC39A6Q13433 755 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 STK38Q15208 465 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 L3MBTL2Q969R5 705 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 STK24Q9Y6E0 443 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 GOLGA8CPA6NN73 597 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 NUMBP49757 651 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 GOLGA8FQ08AF8 430 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 GOLGA8DPQ0D2H9 430 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 LRRC59Q96AG4 307 aaKnown RBP3.88□□□□□ -1.79
SYNE2-212ENST00000554584 MAGEC2Q9UBF1 373 aaPredicted RBP3.88□□□□□ -1.79
SYNE2-212ENST00000554584 TBC1D2BQ9UPU7 963 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 CCDC50Q8IVM0 306 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 TATP17735 454 aaPredicted RBP3.88□□□□□ -1.79
SYNE2-212ENST00000554584 PRKAR2BP31323 418 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 ZBTB33Q86T24 672 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 RNF217Q8TC41 542 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 NCKAP5LQ9HCH0 1330 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 ST20-MTHFSA0A0A6YYL1 179 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 PTPROQ16827 1216 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 KTN1Q86UP2 1357 aaKnown RBP3.88□□□□□ -1.79
SYNE2-212ENST00000554584 SOGA1O94964 1423 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 LCA5Q86VQ0 697 aa3.88□□□□□ -1.79
SYNE2-212ENST00000554584 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.88□□□□□ -1.79
SYNE2-212ENST00000554584 PABPN1LA6NDY0 278 aaKnown RBP3.88□□□□□ -1.79
SYNE2-212ENST00000554584 HAUS7Q99871 368 aa3.87□□□□□ -1.79
SYNE2-212ENST00000554584 ARID4AP29374 1257 aaPredicted RBP3.87□□□□□ -1.79
SYNE2-212ENST00000554584 PRC1O43663 620 aa3.87□□□□□ -1.79
SYNE2-212ENST00000554584 SEPT6Q14141 434 aa3.87□□□□□ -1.79
SYNE2-212ENST00000554584 BICD1Q96G01 975 aa3.87□□□□□ -1.79
SYNE2-212ENST00000554584 PLEKHA4Q9H4M7 779 aa3.87□□□□□ -1.79
SYNE2-212ENST00000554584 CCT2P78371 535 aaKnown RBP3.87□□□□□ -1.79
SYNE2-212ENST00000554584 LONRF3Q496Y0 759 aa3.87□□□□□ -1.79
SYNE2-212ENST00000554584 PAIP2Q9BPZ3 127 aaKnown RBP3.87□□□□□ -1.79
SYNE2-212ENST00000554584 LRP2BPQ9P2M1 347 aa3.87□□□□□ -1.79
SYNE2-212ENST00000554584 EFCAB2Q5VUJ9 269 aa3.87□□□□□ -1.79
SYNE2-212ENST00000554584 RPGRQ92834 1020 aaKnown RBP3.87□□□□□ -1.79
SYNE2-212ENST00000554584 HPS4Q9NQG7 708 aa3.87□□□□□ -1.79
SYNE2-212ENST00000554584 CNGA1P29973 690 aa3.87□□□□□ -1.79
SYNE2-212ENST00000554584 UBE2Q2Q8WVN8 375 aa3.87□□□□□ -1.79
SYNE2-212ENST00000554584 PARD3BQ8TEW8 1205 aa3.87□□□□□ -1.79
SYNE2-212ENST00000554584 GSTTP1A0A1W2PQM5 241 aa3.87□□□□□ -1.79
SYNE2-212ENST00000554584 Q3C1V9 767 aa3.87□□□□□ -1.79
SYNE2-212ENST00000554584 KLHL10Q6JEL2 608 aa3.87□□□□□ -1.79
SYNE2-212ENST00000554584 SLC4A1P02730 911 aa3.87□□□□□ -1.79
SYNE2-212ENST00000554584 GJC2Q5T442 439 aaPredicted RBP3.87□□□□□ -1.79
SYNE2-212ENST00000554584 FAM47CQ5HY64 1035 aa3.87□□□□□ -1.79
SYNE2-212ENST00000554584 MCM10Q7L590 875 aa3.87□□□□□ -1.79
SYNE2-212ENST00000554584 CDCA7Q9BWT1 371 aaPredicted RBP3.87□□□□□ -1.79
SYNE2-212ENST00000554584 DNAJC5BQ9UF47 199 aa3.87□□□□□ -1.79
SYNE2-212ENST00000554584 RDXP35241 583 aaKnown RBP3.87□□□□□ -1.79
SYNE2-212ENST00000554584 SULT6B1Q6IMI4 303 aa3.87□□□□□ -1.79
SYNE2-212ENST00000554584 GPR101Q96P66 508 aaPredicted RBP3.87□□□□□ -1.79
SYNE2-212ENST00000554584 BLVRAP53004 296 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 FOXO3O43524 673 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 CHMP6Q96FZ7 201 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 RABEP2Q9H5N1 569 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 CNTRLQ7Z7A1 2325 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 CCDC160A6NGH7 325 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 RANBP6O60518 1105 aaKnown RBP3.86□□□□□ -1.79
SYNE2-212ENST00000554584 ZWINTO95229 277 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 SKOR2Q2VWA4 1001 aaPredicted RBP3.86□□□□□ -1.79
SYNE2-212ENST00000554584 ACBD5Q5T8D3 534 aaPredicted RBP3.86□□□□□ -1.79
SYNE2-212ENST00000554584 FCHSD2O94868 740 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 ALKBH2Q6NS38 261 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 GIMAP7Q8NHV1 300 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 UBN2Q6ZU65 1347 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 EPB41L2O43491 1005 aaKnown RBP3.86□□□□□ -1.79
SYNE2-212ENST00000554584 TRIM5Q9C035 493 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms