RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 SCARF2Q96GP6 870 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-227ENST00000554491 ESYT1Q9BSJ8 1104 aa7.72□□□□□ -1.17
ATXN3-227ENST00000554491 HRH3Q9Y5N1 445 aa7.72□□□□□ -1.17
ATXN3-227ENST00000554491 APBB1O00213 710 aa7.71□□□□□ -1.18
ATXN3-227ENST00000554491 TRERF1Q96PN7 1200 aa7.71□□□□□ -1.18
ATXN3-227ENST00000554491 NUCKS1Q9H1E3 243 aaKnown RBP7.71□□□□□ -1.18
ATXN3-227ENST00000554491 GPAMQ9HCL2 828 aa7.71□□□□□ -1.18
ATXN3-227ENST00000554491 DNMT3AQ9Y6K1 912 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-227ENST00000554491 MYCP01106 439 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-227ENST00000554491 IRF5Q13568 498 aa7.7□□□□□ -1.18
ATXN3-227ENST00000554491 CNTNAP5Q8WYK1 1306 aa7.7□□□□□ -1.18
ATXN3-227ENST00000554491 BCRP11274 1271 aa7.69□□□□□ -1.18
ATXN3-227ENST00000554491 MX2P20592 715 aa7.69□□□□□ -1.18
ATXN3-227ENST00000554491 KANK3Q6NY19 840 aa7.69□□□□□ -1.18
ATXN3-227ENST00000554491 PHTF2Q8N3S3 785 aa7.69□□□□□ -1.18
ATXN3-227ENST00000554491 XAGE2Q96GT9 111 aa7.69□□□□□ -1.18
ATXN3-227ENST00000554491 ZSCAN10Q96SZ4 725 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-227ENST00000554491 FHDC1Q9C0D6 1143 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-227ENST00000554491 ENAMQ9NRM1 1142 aa7.69□□□□□ -1.18
ATXN3-227ENST00000554491 TPRNQ4KMQ1 711 aa7.68□□□□□ -1.18
ATXN3-227ENST00000554491 C4orf17Q53FE4 359 aa7.67□□□□□ -1.18
ATXN3-227ENST00000554491 DOLKQ9UPQ8 538 aa7.67□□□□□ -1.18
ATXN3-227ENST00000554491 TMEM214Q6NUQ4 689 aaKnown RBP7.66□□□□□ -1.18
ATXN3-227ENST00000554491 NEDD1Q8NHV4 660 aa7.66□□□□□ -1.18
ATXN3-227ENST00000554491 RUBCNLQ9H714 662 aa7.66□□□□□ -1.18
ATXN3-227ENST00000554491 ETNK1Q9HBU6 452 aa7.66□□□□□ -1.18
ATXN3-227ENST00000554491 A0A1B0GTH6 734 aa7.65□□□□□ -1.18
ATXN3-227ENST00000554491 EIF4G2P78344 907 aaKnown RBP eCLIP7.65□□□□□ -1.18
ATXN3-227ENST00000554491 VAC14Q08AM6 782 aa7.65□□□□□ -1.18
ATXN3-227ENST00000554491 UBAP2LQ14157 1087 aaKnown RBP7.65□□□□□ -1.18
ATXN3-227ENST00000554491 SLFNL1Q499Z3 407 aa7.65□□□□□ -1.18
ATXN3-227ENST00000554491 OXLD1Q5BKU9 147 aa7.65□□□□□ -1.18
ATXN3-227ENST00000554491 GNASQ5JWF2 1037 aa7.65□□□□□ -1.18
ATXN3-227ENST00000554491 RNF135Q8IUD6 432 aa7.65□□□□□ -1.18
ATXN3-227ENST00000554491 THOC2Q8NI27 1593 aaKnown RBP7.65□□□□□ -1.18
ATXN3-227ENST00000554491 DCAF1Q9Y4B6 1507 aa7.64□□□□□ -1.19
ATXN3-227ENST00000554491 OIP5O43482 229 aa7.64□□□□□ -1.19
ATXN3-227ENST00000554491 MSX1P28360 303 aa7.64□□□□□ -1.19
ATXN3-227ENST00000554491 USP4Q13107 963 aa7.64□□□□□ -1.19
ATXN3-227ENST00000554491 DCAF5Q96JK2 942 aa7.64□□□□□ -1.19
ATXN3-227ENST00000554491 OXCT2Q9BYC2 517 aaPredicted RBP7.64□□□□□ -1.19
ATXN3-227ENST00000554491 GDPD2Q9HCC8 539 aa7.64□□□□□ -1.19
ATXN3-227ENST00000554491 NSFL1CQ9UNZ2 370 aaKnown RBP7.64□□□□□ -1.19
ATXN3-227ENST00000554491 ITGB2P05107 769 aa7.63□□□□□ -1.19
ATXN3-227ENST00000554491 ESCO1Q5FWF5 840 aa7.63□□□□□ -1.19
ATXN3-227ENST00000554491 C1orf229Q6ZS94 237 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-227ENST00000554491 BEND7Q8N7W2 519 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-227ENST00000554491 CFHR5Q9BXR6 569 aa7.63□□□□□ -1.19
ATXN3-227ENST00000554491 CHIC2Q9UKJ5 165 aa7.63□□□□□ -1.19
ATXN3-227ENST00000554491 PHF20L1A8MW92 1017 aa7.62□□□□□ -1.19
ATXN3-227ENST00000554491 SHISA8B8ZZ34 492 aa7.62□□□□□ -1.19
ATXN3-227ENST00000554491 IGHA1P01876 353 aa7.62□□□□□ -1.19
ATXN3-227ENST00000554491 GTF2E1P29083 439 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-227ENST00000554491 FOXK2Q01167 660 aa7.62□□□□□ -1.19
ATXN3-227ENST00000554491 TLR1Q15399 786 aa7.62□□□□□ -1.19
ATXN3-227ENST00000554491 KLRG1Q96E93 195 aa7.62□□□□□ -1.19
ATXN3-227ENST00000554491 LRRC4BQ9NT99 713 aa7.62□□□□□ -1.19
ATXN3-227ENST00000554491 ZCCHC6Q5VYS8 1495 aaKnown RBP7.62□□□□□ -1.19
ATXN3-227ENST00000554491 CSB-PGBD3P0DP91 1061 aa7.61□□□□□ -1.19
ATXN3-227ENST00000554491 ABL2P42684 1182 aa7.61□□□□□ -1.19
ATXN3-227ENST00000554491 MAP2K3P46734 347 aa7.61□□□□□ -1.19
ATXN3-227ENST00000554491 SCNN1DP51172 638 aa7.61□□□□□ -1.19
ATXN3-227ENST00000554491 SNRPNP63162 240 aaKnown RBP7.61□□□□□ -1.19
ATXN3-227ENST00000554491 PLA2G4EQ3MJ16 856 aa7.61□□□□□ -1.19
ATXN3-227ENST00000554491 PODNQ7Z5L7 613 aa7.61□□□□□ -1.19
ATXN3-227ENST00000554491 PPARGC1BQ86YN6 1023 aaKnown RBP7.61□□□□□ -1.19
ATXN3-227ENST00000554491 PGBD3Q8N328 593 aa7.61□□□□□ -1.19
ATXN3-227ENST00000554491 RHBDD1Q8TEB9 315 aa7.61□□□□□ -1.19
ATXN3-227ENST00000554491 ABHD17AQ96GS6 310 aa7.61□□□□□ -1.19
ATXN3-227ENST00000554491 PRM3Q9NNZ6 103 aa7.61□□□□□ -1.19
ATXN3-227ENST00000554491 C2CD2LO14523 706 aa7.6□□□□□ -1.19
ATXN3-227ENST00000554491 BNIP3LO60238 219 aa7.59□□□□□ -1.19
ATXN3-227ENST00000554491 INHAP05111 366 aa7.59□□□□□ -1.19
ATXN3-227ENST00000554491 PLA2G4AP47712 749 aa7.59□□□□□ -1.19
ATXN3-227ENST00000554491 GDF10P55107 478 aa7.59□□□□□ -1.19
ATXN3-227ENST00000554491 GALNT6Q8NCL4 622 aa7.59□□□□□ -1.19
ATXN3-227ENST00000554491 NDFIP2Q9NV92 336 aa7.59□□□□□ -1.19
ATXN3-227ENST00000554491 PHF24Q9UPV7 400 aa7.59□□□□□ -1.19
ATXN3-227ENST00000554491 CTBSQ01459 385 aa7.58□□□□□ -1.2
ATXN3-227ENST00000554491 LBRQ14739 615 aaKnown RBP7.58□□□□□ -1.2
ATXN3-227ENST00000554491 EFHC2Q5JST6 749 aa7.58□□□□□ -1.2
ATXN3-227ENST00000554491 ATXN7L1Q9ULK2 861 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-227ENST00000554491 BMP4P12644 408 aa7.57□□□□□ -1.2
ATXN3-227ENST00000554491 ATP4AP20648 1035 aa7.57□□□□□ -1.2
ATXN3-227ENST00000554491 PLPP7Q8NBV4 271 aa7.57□□□□□ -1.2
ATXN3-227ENST00000554491 SIRT1Q96EB6 747 aa7.57□□□□□ -1.2
ATXN3-227ENST00000554491 SPOCK3Q9BQ16 436 aa7.57□□□□□ -1.2
ATXN3-227ENST00000554491 CRISPLD1Q9H336 500 aa7.57□□□□□ -1.2
ATXN3-227ENST00000554491 DNAAF2Q9NVR5 837 aaKnown RBP7.57□□□□□ -1.2
ATXN3-227ENST00000554491 PIK3CDO00329 1044 aa7.56□□□□□ -1.2
ATXN3-227ENST00000554491 MSTNO14793 375 aa7.56□□□□□ -1.2
ATXN3-227ENST00000554491 FGFR3P22607 806 aa7.56□□□□□ -1.2
ATXN3-227ENST00000554491 TBC1D9Q6ZT07 1266 aa7.56□□□□□ -1.2
ATXN3-227ENST00000554491 EDARADDQ8WWZ3 215 aa7.56□□□□□ -1.2
ATXN3-227ENST00000554491 SERTAD1Q9UHV2 236 aa7.56□□□□□ -1.2
ATXN3-227ENST00000554491 HCN2Q9UL51 889 aa7.56□□□□□ -1.2
ATXN3-227ENST00000554491 PROCP04070 461 aa7.55□□□□□ -1.2
ATXN3-227ENST00000554491 SMTNP53814 917 aa7.55□□□□□ -1.2
ATXN3-227ENST00000554491 MCM6Q14566 821 aa7.55□□□□□ -1.2
ATXN3-227ENST00000554491 MAP7D1Q3KQU3 841 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms