RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 CHMP4BQ9H444 224 aaKnown RBP18.32■□□□□ 0.52
PPP4R3A-201ENST00000554308 UPF2Q9HAU5 1272 aaKnown RBP18.32■□□□□ 0.52
PPP4R3A-201ENST00000554308 AMOTQ4VCS5 1084 aa18.31■□□□□ 0.52
PPP4R3A-201ENST00000554308 SPATA31A3Q5VYP0 1347 aa18.31■□□□□ 0.52
PPP4R3A-201ENST00000554308 MED1Q15648 1581 aaPredicted RBP18.3■□□□□ 0.52
PPP4R3A-201ENST00000554308 KCNQ3O43525 872 aa18.3■□□□□ 0.52
PPP4R3A-201ENST00000554308 EIF2S2P20042 333 aaKnown RBP18.3■□□□□ 0.52
PPP4R3A-201ENST00000554308 GZF1Q9H116 711 aaPredicted RBP18.3■□□□□ 0.52
PPP4R3A-201ENST00000554308 PTPRCP08575 1304 aa18.3■□□□□ 0.52
PPP4R3A-201ENST00000554308 STRCQ7RTU9 1775 aa18.3■□□□□ 0.52
PPP4R3A-201ENST00000554308 CCDC30Q5VVM6 783 aa18.29■□□□□ 0.52
PPP4R3A-201ENST00000554308 INTS3Q68E01 1043 aaKnown RBP18.29■□□□□ 0.52
PPP4R3A-201ENST00000554308 BTBD11A6QL63 1104 aa18.29■□□□□ 0.52
PPP4R3A-201ENST00000554308 SIRT2Q8IXJ6 389 aa18.29■□□□□ 0.52
PPP4R3A-201ENST00000554308 SMC5Q8IY18 1101 aa18.29■□□□□ 0.52
PPP4R3A-201ENST00000554308 RAPGEF4Q8WZA2 1011 aa18.29■□□□□ 0.52
PPP4R3A-201ENST00000554308 TNS3Q68CZ2 1445 aa18.28■□□□□ 0.52
PPP4R3A-201ENST00000554308 CEMIPQ8WUJ3 1361 aa18.28■□□□□ 0.52
PPP4R3A-201ENST00000554308 FKBP5Q13451 457 aaPredicted RBP18.28■□□□□ 0.52
PPP4R3A-201ENST00000554308 LNPKQ9C0E8 428 aa18.28■□□□□ 0.52
PPP4R3A-201ENST00000554308 HDGFL1Q5TGJ6 251 aa18.27■□□□□ 0.52
PPP4R3A-201ENST00000554308 RGS12O14924 1447 aa18.27■□□□□ 0.51
PPP4R3A-201ENST00000554308 ALS2Q96Q42 1657 aa18.27■□□□□ 0.51
PPP4R3A-201ENST00000554308 RNMTO43148 476 aaKnown RBP18.26■□□□□ 0.51
PPP4R3A-201ENST00000554308 MFAP1P55081 439 aaKnown RBP18.26■□□□□ 0.51
PPP4R3A-201ENST00000554308 FLIIQ13045 1269 aa18.26■□□□□ 0.51
PPP4R3A-201ENST00000554308 ANKRD45Q5TZF3 282 aa18.26■□□□□ 0.51
PPP4R3A-201ENST00000554308 PHRF1Q9P1Y6 1649 aaKnown RBP18.26■□□□□ 0.51
PPP4R3A-201ENST00000554308 MEIS3Q99687 375 aa18.26■□□□□ 0.51
PPP4R3A-201ENST00000554308 BABAM1Q9NWV8 329 aa18.26■□□□□ 0.51
PPP4R3A-201ENST00000554308 PXDNQ92626 1479 aa18.26■□□□□ 0.51
PPP4R3A-201ENST00000554308 XRCC6P12956 609 aaKnown RBP eCLIP18.25■□□□□ 0.51
PPP4R3A-201ENST00000554308 EIF4A1P60842 406 aaKnown RBP18.25■□□□□ 0.51
PPP4R3A-201ENST00000554308 PANK2Q9BZ23 570 aa18.25■□□□□ 0.51
PPP4R3A-201ENST00000554308 RGPD5Q99666 1765 aa18.24■□□□□ 0.51
PPP4R3A-201ENST00000554308 MCM4P33991 863 aa18.24■□□□□ 0.51
PPP4R3A-201ENST00000554308 NUCB1Q02818 461 aa18.24■□□□□ 0.51
PPP4R3A-201ENST00000554308 L1TD1Q5T7N2 865 aaKnown RBP18.24■□□□□ 0.51
PPP4R3A-201ENST00000554308 PHAXQ9H814 394 aaKnown RBP18.24■□□□□ 0.51
PPP4R3A-201ENST00000554308 PRDM11Q9NQV5 511 aa18.24■□□□□ 0.51
PPP4R3A-201ENST00000554308 CHD1LQ86WJ1 897 aa18.23■□□□□ 0.51
PPP4R3A-201ENST00000554308 C22orf23Q9BZE7 217 aa18.23■□□□□ 0.51
PPP4R3A-201ENST00000554308 TATP17735 454 aaPredicted RBP18.23■□□□□ 0.51
PPP4R3A-201ENST00000554308 XIRP1Q702N8 1843 aaKnown RBP18.23■□□□□ 0.51
PPP4R3A-201ENST00000554308 ANXA1P04083 346 aa18.22■□□□□ 0.51
PPP4R3A-201ENST00000554308 LRRC37A3O60309 1634 aa18.22■□□□□ 0.51
PPP4R3A-201ENST00000554308 GCC1Q96CN9 775 aa18.21■□□□□ 0.51
PPP4R3A-201ENST00000554308 CHPF2Q9P2E5 772 aa18.2■□□□□ 0.5
PPP4R3A-201ENST00000554308 NCAPD2Q15021 1401 aa18.2■□□□□ 0.5
PPP4R3A-201ENST00000554308 SOS2Q07890 1332 aaPredicted RBP18.2■□□□□ 0.5
PPP4R3A-201ENST00000554308 GOLGA6L3A6NEY3 463 aa18.2■□□□□ 0.5
PPP4R3A-201ENST00000554308 APBB1O00213 710 aa18.2■□□□□ 0.5
PPP4R3A-201ENST00000554308 CCT4P50991 539 aaKnown RBP18.2■□□□□ 0.5
PPP4R3A-201ENST00000554308 FSD2A1L4K1 749 aa18.19■□□□□ 0.5
PPP4R3A-201ENST00000554308 PRAMEF22A3QJZ6 481 aa18.19■□□□□ 0.5
PPP4R3A-201ENST00000554308 SPG7Q9UQ90 795 aa18.19■□□□□ 0.5
PPP4R3A-201ENST00000554308 SLC39A6Q13433 755 aa18.19■□□□□ 0.5
PPP4R3A-201ENST00000554308 NFATC2IPQ8NCF5 419 aa18.19■□□□□ 0.5
PPP4R3A-201ENST00000554308 CEP85Q6P2H3 762 aa18.18■□□□□ 0.5
PPP4R3A-201ENST00000554308 TOM1L2Q6ZVM7 507 aa18.18■□□□□ 0.5
PPP4R3A-201ENST00000554308 PHKG2P15735 406 aa18.17■□□□□ 0.5
PPP4R3A-201ENST00000554308 UBE2Q2Q8WVN8 375 aa18.17■□□□□ 0.5
PPP4R3A-201ENST00000554308 TRAK2O60296 914 aa18.17■□□□□ 0.5
PPP4R3A-201ENST00000554308 ANKRD44Q8N8A2 993 aa18.17■□□□□ 0.5
PPP4R3A-201ENST00000554308 STRN4Q9NRL3 753 aa18.17■□□□□ 0.5
PPP4R3A-201ENST00000554308 SOS1Q07889 1333 aaPredicted RBP18.17■□□□□ 0.5
PPP4R3A-201ENST00000554308 RPAP2Q8IXW5 612 aaPredicted RBP18.16■□□□□ 0.5
PPP4R3A-201ENST00000554308 CHMP5Q9NZZ3 219 aa18.16■□□□□ 0.5
PPP4R3A-201ENST00000554308 MEGF6O75095 1541 aa18.16■□□□□ 0.5
PPP4R3A-201ENST00000554308 IFNL2Q8IZJ0 200 aa18.16■□□□□ 0.5
PPP4R3A-201ENST00000554308 CPDO75976 1380 aa18.15■□□□□ 0.5
PPP4R3A-201ENST00000554308 CYP27B1O15528 508 aa18.15■□□□□ 0.5
PPP4R3A-201ENST00000554308 GIGYF1O75420 1035 aaPredicted RBP18.15■□□□□ 0.5
PPP4R3A-201ENST00000554308 DCTPP1Q9H773 170 aa18.15■□□□□ 0.5
PPP4R3A-201ENST00000554308 PI4KAP2A4QPH2 592 aa18.14■□□□□ 0.49
PPP4R3A-201ENST00000554308 PI4KAP1Q8N8J0 262 aa18.14■□□□□ 0.49
PPP4R3A-201ENST00000554308 SLC52A2Q9HAB3 445 aa18.14■□□□□ 0.49
PPP4R3A-201ENST00000554308 GNAI2P04899 355 aa18.13■□□□□ 0.49
PPP4R3A-201ENST00000554308 HOXB7P09629 217 aa18.13■□□□□ 0.49
PPP4R3A-201ENST00000554308 ATP10DQ9P241 1426 aa18.13■□□□□ 0.49
PPP4R3A-201ENST00000554308 EVA1CP58658 441 aa18.13■□□□□ 0.49
PPP4R3A-201ENST00000554308 PROSER3Q2NL68 480 aa18.13■□□□□ 0.49
PPP4R3A-201ENST00000554308 ZNF790Q6PG37 636 aa18.13■□□□□ 0.49
PPP4R3A-201ENST00000554308 C16orf71Q8IYS4 520 aaPredicted RBP18.13■□□□□ 0.49
PPP4R3A-201ENST00000554308 LMO7Q8WWI1 1683 aa18.13■□□□□ 0.49
PPP4R3A-201ENST00000554308 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.12■□□□□ 0.496e-9■■■■■ 27.8
PPP4R3A-201ENST00000554308 DBF4Q9UBU7 674 aaPredicted RBP18.12■□□□□ 0.49
PPP4R3A-201ENST00000554308 COL18A1P39060 1754 aa18.12■□□□□ 0.49
PPP4R3A-201ENST00000554308 WDR17Q8IZU2 1322 aa18.11■□□□□ 0.49
PPP4R3A-201ENST00000554308 SMARCA5O60264 1052 aaPredicted RBP18.11■□□□□ 0.49
PPP4R3A-201ENST00000554308 HSCBQ8IWL3 235 aa18.11■□□□□ 0.49
PPP4R3A-201ENST00000554308 USP44Q9H0E7 712 aa18.11■□□□□ 0.49
PPP4R3A-201ENST00000554308 KDM6AO15550 1401 aaPredicted RBP18.1■□□□□ 0.49
PPP4R3A-201ENST00000554308 GNAI3P08754 354 aa18.1■□□□□ 0.49
PPP4R3A-201ENST00000554308 LARP1Q6PKG0 1096 aaKnown RBP18.1■□□□□ 0.49
PPP4R3A-201ENST00000554308 DCAF5Q96JK2 942 aa18.1■□□□□ 0.49
PPP4R3A-201ENST00000554308 CHMP4AQ9BY43 222 aa18.1■□□□□ 0.49
PPP4R3A-201ENST00000554308 AIMP1Q12904 312 aaKnown RBP18.1■□□□□ 0.49
PPP4R3A-201ENST00000554308 LRRFIP2Q9Y608 721 aaKnown RBP18.1■□□□□ 0.49
PPP4R3A-201ENST00000554308 CAMTA1Q9Y6Y1 1673 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms