RNA–Protein interactions for RNA: ENST00000554170.1

XRCC3-206, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-206ENST00000554170 KIF13BQ9NQT8 1826 aa17.35■□□□□ 0.37
XRCC3-206ENST00000554170 SSFA2P28290 1259 aa17.34■□□□□ 0.37
XRCC3-206ENST00000554170 NKX1-1Q15270 411 aaPredicted RBP17.34■□□□□ 0.37
XRCC3-206ENST00000554170 SMIM5Q71RC9 77 aa17.34■□□□□ 0.37
XRCC3-206ENST00000554170 LOC102724428A0A0B4J2F2 783 aa17.33■□□□□ 0.36
XRCC3-206ENST00000554170 SIK1P57059 783 aa17.33■□□□□ 0.36
XRCC3-206ENST00000554170 ZNF526Q8TF50 670 aaPredicted RBP17.33■□□□□ 0.36
XRCC3-206ENST00000554170 CICQ96RK0 1608 aaPredicted RBP17.32■□□□□ 0.36
XRCC3-206ENST00000554170 HSPA6P17066 643 aa17.32■□□□□ 0.36
XRCC3-206ENST00000554170 MTHFSP49914 203 aa17.32■□□□□ 0.36
XRCC3-206ENST00000554170 LINC00116Q8NCU8 138 aa17.32■□□□□ 0.36
XRCC3-206ENST00000554170 SPG7Q9UQ90 795 aa17.32■□□□□ 0.36
XRCC3-206ENST00000554170 KIAA1551Q9HCM1 1747 aa17.31■□□□□ 0.36
XRCC3-206ENST00000554170 ZNF316A6NFI3 1004 aaPredicted RBP17.31■□□□□ 0.36
XRCC3-206ENST00000554170 EIF4A2Q14240 407 aaKnown RBP17.31■□□□□ 0.36
XRCC3-206ENST00000554170 WWC3Q9ULE0 1092 aa17.31■□□□□ 0.36
XRCC3-206ENST00000554170 N4BP2Q86UW6 1770 aaPredicted RBP17.3■□□□□ 0.36
XRCC3-206ENST00000554170 EYA1Q99502 592 aa17.3■□□□□ 0.36
XRCC3-206ENST00000554170 TMOD3Q9NYL9 352 aa17.3■□□□□ 0.36
XRCC3-206ENST00000554170 ITPK1Q13572 414 aa17.29■□□□□ 0.36
XRCC3-206ENST00000554170 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.29■□□□□ 0.36
XRCC3-206ENST00000554170 ASAP1Q9ULH1 1129 aa17.29■□□□□ 0.36
XRCC3-206ENST00000554170 GNPATO15228 680 aa17.28■□□□□ 0.36
XRCC3-206ENST00000554170 ZNF831Q5JPB2 1677 aa17.28■□□□□ 0.36
XRCC3-206ENST00000554170 BRCA1P38398 1863 aaKnown RBP17.27■□□□□ 0.36
XRCC3-206ENST00000554170 ATP6V1AP38606 617 aa17.27■□□□□ 0.36
XRCC3-206ENST00000554170 CFAP53Q96M91 514 aa17.27■□□□□ 0.36
XRCC3-206ENST00000554170 COL5A3P25940 1745 aaPredicted RBP17.27■□□□□ 0.35
XRCC3-206ENST00000554170 PXDNLA1KZ92 1463 aa17.26■□□□□ 0.35
XRCC3-206ENST00000554170 KIF3CO14782 793 aa17.25■□□□□ 0.35
XRCC3-206ENST00000554170 DIAPH1O60610 1272 aaKnown RBP17.25■□□□□ 0.35
XRCC3-206ENST00000554170 MMP10P09238 476 aa17.25■□□□□ 0.35
XRCC3-206ENST00000554170 PHKG2P15735 406 aa17.25■□□□□ 0.35
XRCC3-206ENST00000554170 IFNL2Q8IZJ0 200 aa17.25■□□□□ 0.35
XRCC3-206ENST00000554170 MYH14Q7Z406 1995 aaKnown RBP17.24■□□□□ 0.35
XRCC3-206ENST00000554170 PPP2R1AP30153 589 aa17.24■□□□□ 0.35
XRCC3-206ENST00000554170 IL13P35225 146 aa17.24■□□□□ 0.35
XRCC3-206ENST00000554170 ATG3Q9NT62 314 aa17.24■□□□□ 0.35
XRCC3-206ENST00000554170 KDRP35968 1356 aa17.24■□□□□ 0.35
XRCC3-206ENST00000554170 PLEKHG2Q9H7P9 1386 aa17.24■□□□□ 0.35
XRCC3-206ENST00000554170 RALBP1Q15311 655 aa17.23■□□□□ 0.35
XRCC3-206ENST00000554170 C4AP0C0L4 1744 aa17.23■□□□□ 0.35
XRCC3-206ENST00000554170 C10orf71Q711Q0 1435 aa17.22■□□□□ 0.35
XRCC3-206ENST00000554170 ARFGEF1Q9Y6D6 1849 aa17.22■□□□□ 0.35
XRCC3-206ENST00000554170 TGFB2P61812 414 aa17.21■□□□□ 0.35
XRCC3-206ENST00000554170 TRAPPC3LQ5T215 181 aa17.21■□□□□ 0.35
XRCC3-206ENST00000554170 SULT6B1Q6IMI4 303 aa17.21■□□□□ 0.35
XRCC3-206ENST00000554170 RTCBQ9Y3I0 505 aaKnown RBP17.21■□□□□ 0.35
XRCC3-206ENST00000554170 NLGN1Q8N2Q7 840 aa17.2■□□□□ 0.34
XRCC3-206ENST00000554170 NUDCQ9Y266 331 aa17.2■□□□□ 0.34
XRCC3-206ENST00000554170 U2SURPO15042 1029 aaKnown RBP17.19■□□□□ 0.34
XRCC3-206ENST00000554170 ADRA2BP18089 450 aa17.19■□□□□ 0.34
XRCC3-206ENST00000554170 SLC4A9Q96Q91 983 aa17.19■□□□□ 0.34
XRCC3-206ENST00000554170 BCS1LQ9Y276 419 aa17.19■□□□□ 0.34
XRCC3-206ENST00000554170 CNTNAP4Q9C0A0 1308 aa17.19■□□□□ 0.34
XRCC3-206ENST00000554170 A0A0G2JLW4 131 aa17.18■□□□□ 0.34
XRCC3-206ENST00000554170 ERVV-2B6SEH9 535 aa17.18■□□□□ 0.34
XRCC3-206ENST00000554170 APLP1P51693 650 aa17.18■□□□□ 0.34
XRCC3-206ENST00000554170 PLEKHO1Q53GL0 409 aaPredicted RBP17.18■□□□□ 0.34
XRCC3-206ENST00000554170 GYS1P13807 737 aa17.17■□□□□ 0.34
XRCC3-206ENST00000554170 AMOTQ4VCS5 1084 aa17.17■□□□□ 0.34
XRCC3-206ENST00000554170 RC3H1Q5TC82 1133 aaKnown RBP17.17■□□□□ 0.34
XRCC3-206ENST00000554170 AEBP1Q8IUX7 1158 aa17.17■□□□□ 0.34
XRCC3-206ENST00000554170 ARHGEF1Q92888 912 aaKnown RBP17.17■□□□□ 0.34
XRCC3-206ENST00000554170 DCAF5Q96JK2 942 aa17.17■□□□□ 0.34
XRCC3-206ENST00000554170 RBM42Q9BTD8 480 aaKnown RBP17.17■□□□□ 0.34
XRCC3-206ENST00000554170 CCDC87Q9NVE4 849 aa17.17■□□□□ 0.34
XRCC3-206ENST00000554170 TOMM70O94826 608 aa17.16■□□□□ 0.34
XRCC3-206ENST00000554170 HSP90AB1P08238 724 aaKnown RBP17.16■□□□□ 0.34
XRCC3-206ENST00000554170 HMOX1P09601 288 aa17.16■□□□□ 0.34
XRCC3-206ENST00000554170 KDM6AO15550 1401 aaPredicted RBP17.15■□□□□ 0.34
XRCC3-206ENST00000554170 RPS6KA4O75676 772 aa17.15■□□□□ 0.34
XRCC3-206ENST00000554170 DPEP1P16444 411 aa17.15■□□□□ 0.34
XRCC3-206ENST00000554170 RFC4P35249 363 aa17.15■□□□□ 0.34
XRCC3-206ENST00000554170 ARHGAP27Q6ZUM4 889 aa17.15■□□□□ 0.34
XRCC3-206ENST00000554170 SBF1O95248 1867 aa17.15■□□□□ 0.34
XRCC3-206ENST00000554170 WDR90Q96KV7 1748 aa17.15■□□□□ 0.34
XRCC3-206ENST00000554170 COL3A1P02461 1466 aaPredicted RBP17.14■□□□□ 0.33
XRCC3-206ENST00000554170 PARP3Q9Y6F1 533 aa17.14■□□□□ 0.33
XRCC3-206ENST00000554170 MYBBP1AQ9BQG0 1328 aaKnown RBP17.14■□□□□ 0.33
XRCC3-206ENST00000554170 TJP1Q07157 1748 aa17.13■□□□□ 0.33
XRCC3-206ENST00000554170 FCHSD2O94868 740 aa17.13■□□□□ 0.33
XRCC3-206ENST00000554170 NMRK2Q9NPI5 230 aa17.13■□□□□ 0.33
XRCC3-206ENST00000554170 SCN11AQ9UI33 1791 aa17.12■□□□□ 0.33
XRCC3-206ENST00000554170 U2AF1L5P0DN76 240 aaPredicted RBP17.12■□□□□ 0.33
XRCC3-206ENST00000554170 U2AF1Q01081 240 aaKnown RBP eCLIP17.12■□□□□ 0.33
XRCC3-206ENST00000554170 DNAJC5GQ8N7S2 189 aa17.12■□□□□ 0.33
XRCC3-206ENST00000554170 PRKRIP1Q9H875 184 aaPredicted RBP17.12■□□□□ 0.33
XRCC3-206ENST00000554170 VIRMAQ69YN4 1812 aaKnown RBP17.12■□□□□ 0.33
XRCC3-206ENST00000554170 KCNA3P22001 575 aa17.11■□□□□ 0.33
XRCC3-206ENST00000554170 CABP4P57796 275 aa17.11■□□□□ 0.33
XRCC3-206ENST00000554170 C1orf141Q5JVX7 400 aa17.11■□□□□ 0.33
XRCC3-206ENST00000554170 ZNF530Q6P9A1 599 aaPredicted RBP17.11■□□□□ 0.33
XRCC3-206ENST00000554170 ADAMTS7Q9UKP4 1686 aa17.1■□□□□ 0.33
XRCC3-206ENST00000554170 CRKLP46109 303 aaKnown RBP17.09■□□□□ 0.33
XRCC3-206ENST00000554170 C9orf131Q5VYM1 1079 aa17.09■□□□□ 0.33
XRCC3-206ENST00000554170 RBM46Q8TBY0 533 aaKnown RBP17.09■□□□□ 0.33
XRCC3-206ENST00000554170 PIM2Q9P1W9 311 aa17.09■□□□□ 0.33
XRCC3-206ENST00000554170 TNRC6CQ9HCJ0 1690 aaKnown RBP17.09■□□□□ 0.33
XRCC3-206ENST00000554170 USP42Q9H9J4 1324 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms