RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 KDM3BQ7LBC6 1761 aa11.42□□□□□ -0.58
RAB3IP-218ENST00000553099 NCAPD2Q15021 1401 aa11.42□□□□□ -0.58
RAB3IP-218ENST00000553099 FLIIQ13045 1269 aa11.42□□□□□ -0.58
RAB3IP-218ENST00000553099 BABAM1Q9NWV8 329 aa11.42□□□□□ -0.58
RAB3IP-218ENST00000553099 CRYBG1Q9Y4K1 1723 aa11.41□□□□□ -0.58
RAB3IP-218ENST00000553099 ANKRD45Q5TZF3 282 aa11.41□□□□□ -0.58
RAB3IP-218ENST00000553099 SIRT2Q8IXJ6 389 aa11.41□□□□□ -0.58
RAB3IP-218ENST00000553099 MEIS3Q99687 375 aa11.41□□□□□ -0.58
RAB3IP-218ENST00000553099 ANP32EQ9BTT0 268 aa11.41□□□□□ -0.58
RAB3IP-218ENST00000553099 COL18A1P39060 1754 aa11.41□□□□□ -0.58
RAB3IP-218ENST00000553099 RNMTO43148 476 aaKnown RBP11.41□□□□□ -0.58
RAB3IP-218ENST00000553099 KCNQ3O43525 872 aa11.41□□□□□ -0.58
RAB3IP-218ENST00000553099 NUCB1Q02818 461 aa11.4□□□□□ -0.59
RAB3IP-218ENST00000553099 CHD1LQ86WJ1 897 aa11.4□□□□□ -0.59
RAB3IP-218ENST00000553099 GCC1Q96CN9 775 aa11.4□□□□□ -0.59
RAB3IP-218ENST00000553099 SEC24BO95487 1268 aa11.39□□□□□ -0.59
RAB3IP-218ENST00000553099 TATP17735 454 aaPredicted RBP11.39□□□□□ -0.59
RAB3IP-218ENST00000553099 EIF4A1P60842 406 aaKnown RBP11.39□□□□□ -0.59
RAB3IP-218ENST00000553099 PRDM11Q9NQV5 511 aa11.39□□□□□ -0.59
RAB3IP-218ENST00000553099 CCT4P50991 539 aaKnown RBP11.38□□□□□ -0.59
RAB3IP-218ENST00000553099 PHAXQ9H814 394 aaKnown RBP11.38□□□□□ -0.59
RAB3IP-218ENST00000553099 MEGF6O75095 1541 aa11.38□□□□□ -0.59
RAB3IP-218ENST00000553099 SOS1Q07889 1333 aaPredicted RBP11.38□□□□□ -0.59
RAB3IP-218ENST00000553099 ATP10DQ9P241 1426 aa11.37□□□□□ -0.59
RAB3IP-218ENST00000553099 APBB1O00213 710 aa11.37□□□□□ -0.59
RAB3IP-218ENST00000553099 DDRGK1Q96HY6 314 aa11.37□□□□□ -0.59
RAB3IP-218ENST00000553099 CHPF2Q9P2E5 772 aa11.37□□□□□ -0.59
RAB3IP-218ENST00000553099 ANXA1P04083 346 aa11.37□□□□□ -0.59
RAB3IP-218ENST00000553099 SPG7Q9UQ90 795 aa11.37□□□□□ -0.59
RAB3IP-218ENST00000553099 SCN11AQ9UI33 1791 aa11.36□□□□□ -0.59
RAB3IP-218ENST00000553099 CEP85Q6P2H3 762 aa11.36□□□□□ -0.59
RAB3IP-218ENST00000553099 SOS2Q07890 1332 aaPredicted RBP11.36□□□□□ -0.59
RAB3IP-218ENST00000553099 SIPA1L3O60292 1781 aaPredicted RBP11.36□□□□□ -0.59
RAB3IP-218ENST00000553099 CPDO75976 1380 aa11.36□□□□□ -0.59
RAB3IP-218ENST00000553099 ANKRD44Q8N8A2 993 aa11.36□□□□□ -0.59
RAB3IP-218ENST00000553099 UPF2Q9HAU5 1272 aaKnown RBP11.36□□□□□ -0.59
RAB3IP-218ENST00000553099 TOM1L2Q6ZVM7 507 aa11.35□□□□□ -0.59
RAB3IP-218ENST00000553099 RPAP2Q8IXW5 612 aaPredicted RBP11.35□□□□□ -0.59
RAB3IP-218ENST00000553099 DAXXQ9UER7 740 aaPredicted RBP11.35□□□□□ -0.59
RAB3IP-218ENST00000553099 OVOS2A0A0G2JMS6 1433 aa11.35□□□□□ -0.59
RAB3IP-218ENST00000553099 ABCC6O95255 1503 aa11.35□□□□□ -0.59
RAB3IP-218ENST00000553099 PRAMEF22A3QJZ6 481 aa11.34□□□□□ -0.59
RAB3IP-218ENST00000553099 HOXB7P09629 217 aa11.34□□□□□ -0.59
RAB3IP-218ENST00000553099 PHKG2P15735 406 aa11.34□□□□□ -0.59
RAB3IP-218ENST00000553099 SLC39A6Q13433 755 aa11.34□□□□□ -0.59
RAB3IP-218ENST00000553099 IFNL2Q8IZJ0 200 aa11.34□□□□□ -0.59
RAB3IP-218ENST00000553099 ABCA3Q99758 1704 aa11.34□□□□□ -0.59
RAB3IP-218ENST00000553099 SLC4A3P48751 1232 aa11.34□□□□□ -0.59
RAB3IP-218ENST00000553099 STRN4Q9NRL3 753 aa11.34□□□□□ -0.59
RAB3IP-218ENST00000553099 N4BP2Q86UW6 1770 aaPredicted RBP11.34□□□□□ -0.59
RAB3IP-218ENST00000553099 KDM6AO15550 1401 aaPredicted RBP11.34□□□□□ -0.59
RAB3IP-218ENST00000553099 GNAI2P04899 355 aa11.33□□□□□ -0.59
RAB3IP-218ENST00000553099 NFATC2IPQ8NCF5 419 aa11.33□□□□□ -0.59
RAB3IP-218ENST00000553099 DCTPP1Q9H773 170 aa11.33□□□□□ -0.59
RAB3IP-218ENST00000553099 HMMRO75330 724 aa11.33□□□□□ -0.6
RAB3IP-218ENST00000553099 MFAP1P55081 439 aaKnown RBP11.33□□□□□ -0.6
RAB3IP-218ENST00000553099 CHMP4AQ9BY43 222 aa11.33□□□□□ -0.6
RAB3IP-218ENST00000553099 ADAMTS7Q9UKP4 1686 aa11.33□□□□□ -0.6
RAB3IP-218ENST00000553099 GIGYF1O75420 1035 aaPredicted RBP11.32□□□□□ -0.6
RAB3IP-218ENST00000553099 GNAI3P08754 354 aa11.32□□□□□ -0.6
RAB3IP-218ENST00000553099 SLC52A2Q9HAB3 445 aa11.32□□□□□ -0.6
RAB3IP-218ENST00000553099 NHSL1Q5SYE7 1610 aa11.32□□□□□ -0.6
RAB3IP-218ENST00000553099 PI4KAP2A4QPH2 592 aa11.32□□□□□ -0.6
RAB3IP-218ENST00000553099 CYP27B1O15528 508 aa11.32□□□□□ -0.6
RAB3IP-218ENST00000553099 PI4KAP1Q8N8J0 262 aa11.32□□□□□ -0.6
RAB3IP-218ENST00000553099 DBF4Q9UBU7 674 aaPredicted RBP11.32□□□□□ -0.6
RAB3IP-218ENST00000553099 WDR17Q8IZU2 1322 aa11.32□□□□□ -0.6
RAB3IP-218ENST00000553099 PKD1L3Q7Z443 1732 aa11.32□□□□□ -0.6
RAB3IP-218ENST00000553099 PXDNLA1KZ92 1463 aa11.32□□□□□ -0.6
RAB3IP-218ENST00000553099 SMARCA5O60264 1052 aaPredicted RBP11.32□□□□□ -0.6
RAB3IP-218ENST00000553099 ZNF790Q6PG37 636 aa11.32□□□□□ -0.6
RAB3IP-218ENST00000553099 SRCIN1Q9C0H9 1055 aa11.32□□□□□ -0.6
RAB3IP-218ENST00000553099 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.32□□□□□ -0.61e-6■■□□□ 13.1
RAB3IP-218ENST00000553099 UBTFL1P0CB47 393 aaPredicted RBP11.31□□□□□ -0.6
RAB3IP-218ENST00000553099 PROSER3Q2NL68 480 aa11.31□□□□□ -0.6
RAB3IP-218ENST00000553099 USP35Q9P2H5 1018 aa11.31□□□□□ -0.6
RAB3IP-218ENST00000553099 LRRFIP2Q9Y608 721 aaKnown RBP11.31□□□□□ -0.6
RAB3IP-218ENST00000553099 COL5A2P05997 1499 aaPredicted RBP11.31□□□□□ -0.6
RAB3IP-218ENST00000553099 PARP4Q9UKK3 1724 aaKnown RBP11.31□□□□□ -0.6
RAB3IP-218ENST00000553099 EVA1CP58658 441 aa11.31□□□□□ -0.6
RAB3IP-218ENST00000553099 NBR1Q14596 966 aa11.31□□□□□ -0.6
RAB3IP-218ENST00000553099 DNAAF4Q8WXU2 420 aa11.31□□□□□ -0.6
RAB3IP-218ENST00000553099 DCAF5Q96JK2 942 aa11.31□□□□□ -0.6
RAB3IP-218ENST00000553099 C5P01031 1676 aa11.31□□□□□ -0.6
RAB3IP-218ENST00000553099 BMP2KLQ5H9B9 411 aa11.3□□□□□ -0.6
RAB3IP-218ENST00000553099 C16orf71Q8IYS4 520 aaPredicted RBP11.3□□□□□ -0.6
RAB3IP-218ENST00000553099 TTC5Q8N0Z6 440 aa11.3□□□□□ -0.6
RAB3IP-218ENST00000553099 EXOC6BQ9Y2D4 811 aa11.3□□□□□ -0.6
RAB3IP-218ENST00000553099 USP44Q9H0E7 712 aa11.3□□□□□ -0.6
RAB3IP-218ENST00000553099 PNMA6EA0A0J9YXQ4 647 aa11.29□□□□□ -0.6
RAB3IP-218ENST00000553099 AIMP1Q12904 312 aaKnown RBP11.29□□□□□ -0.6
RAB3IP-218ENST00000553099 KAT6BQ8WYB5 2073 aa11.29□□□□□ -0.6
RAB3IP-218ENST00000553099 CABP4P57796 275 aa11.29□□□□□ -0.6
RAB3IP-218ENST00000553099 LARP1Q6PKG0 1096 aaKnown RBP11.29□□□□□ -0.6
RAB3IP-218ENST00000553099 OTUD7AQ8TE49 926 aaPredicted RBP11.29□□□□□ -0.6
RAB3IP-218ENST00000553099 TBC1D32Q96NH3 1257 aa11.29□□□□□ -0.6
RAB3IP-218ENST00000553099 ADCY9O60503 1353 aa11.28□□□□□ -0.6
RAB3IP-218ENST00000553099 HEG1Q9ULI3 1381 aa11.28□□□□□ -0.6
RAB3IP-218ENST00000553099 HSP90AB1P08238 724 aaKnown RBP11.28□□□□□ -0.6
RAB3IP-218ENST00000553099 MYL6BP14649 208 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms