RNA–Protein interactions for RNA: ENST00000553060.1

AC087311.1-201, humanhuman

BASIC

Gene AC087311.1, Length 1,233 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087311.1-201ENST00000553060 ITPK1Q13572 414 aa13.7□□□□□ -0.22
AC087311.1-201ENST00000553060 HSP90AB2PQ58FF8 381 aa13.7□□□□□ -0.22
AC087311.1-201ENST00000553060 TRAPPC3LQ5T215 181 aa13.7□□□□□ -0.22
AC087311.1-201ENST00000553060 NLGN1Q8N2Q7 840 aa13.7□□□□□ -0.22
AC087311.1-201ENST00000553060 CCDC87Q9NVE4 849 aa13.7□□□□□ -0.22
AC087311.1-201ENST00000553060 INSRP06213 1382 aa13.7□□□□□ -0.22
AC087311.1-201ENST00000553060 UBR3Q6ZT12 1888 aa13.7□□□□□ -0.22
AC087311.1-201ENST00000553060 CLSPNQ9HAW4 1339 aa13.69□□□□□ -0.22
AC087311.1-201ENST00000553060 NKX1-1Q15270 411 aaPredicted RBP13.69□□□□□ -0.22
AC087311.1-201ENST00000553060 GGNBP2Q9H3C7 697 aa13.69□□□□□ -0.22
AC087311.1-201ENST00000553060 TMOD3Q9NYL9 352 aa13.69□□□□□ -0.22
AC087311.1-201ENST00000553060 RRAGCQ9HB90 399 aa13.68□□□□□ -0.22
AC087311.1-201ENST00000553060 ASAP1Q9ULH1 1129 aa13.68□□□□□ -0.22
AC087311.1-201ENST00000553060 SPG7Q9UQ90 795 aa13.68□□□□□ -0.22
AC087311.1-201ENST00000553060 RTCBQ9Y3I0 505 aaKnown RBP13.68□□□□□ -0.22
AC087311.1-201ENST00000553060 PARP3Q9Y6F1 533 aa13.68□□□□□ -0.22
AC087311.1-201ENST00000553060 KCPQ6ZWJ8 1503 aa13.68□□□□□ -0.22
AC087311.1-201ENST00000553060 FLT4P35916 1363 aa13.68□□□□□ -0.22
AC087311.1-201ENST00000553060 FYB1O15117 783 aa13.67□□□□□ -0.22
AC087311.1-201ENST00000553060 SMC1BQ8NDV3 1235 aa13.67□□□□□ -0.22
AC087311.1-201ENST00000553060 HSPA1AP0DMV8 641 aaKnown RBP13.66□□□□□ -0.22
AC087311.1-201ENST00000553060 HSPA1BP0DMV9 641 aaKnown RBP13.66□□□□□ -0.22
AC087311.1-201ENST00000553060 RNF181Q9P0P0 153 aa13.66□□□□□ -0.22
AC087311.1-201ENST00000553060 PIM2Q9P1W9 311 aa13.66□□□□□ -0.22
AC087311.1-201ENST00000553060 KIF24Q5T7B8 1368 aa13.66□□□□□ -0.22
AC087311.1-201ENST00000553060 KIAA1551Q9HCM1 1747 aa13.65□□□□□ -0.22
AC087311.1-201ENST00000553060 GYS1P13807 737 aa13.65□□□□□ -0.22
AC087311.1-201ENST00000553060 ADRA2BP18089 450 aa13.65□□□□□ -0.22
AC087311.1-201ENST00000553060 KCNA3P22001 575 aa13.65□□□□□ -0.22
AC087311.1-201ENST00000553060 ARHGEF1Q92888 912 aaKnown RBP13.65□□□□□ -0.22
AC087311.1-201ENST00000553060 DCAF5Q96JK2 942 aa13.65□□□□□ -0.22
AC087311.1-201ENST00000553060 ATG3Q9NT62 314 aa13.65□□□□□ -0.22
AC087311.1-201ENST00000553060 N4BP2Q86UW6 1770 aaPredicted RBP13.64□□□□□ -0.23
AC087311.1-201ENST00000553060 RFC4P35249 363 aa13.64□□□□□ -0.23
AC087311.1-201ENST00000553060 DALRD3Q5D0E6 543 aaKnown RBP13.64□□□□□ -0.23
AC087311.1-201ENST00000553060 KIF13BQ9NQT8 1826 aa13.64□□□□□ -0.23
AC087311.1-201ENST00000553060 MAP2P11137 1827 aaKnown RBP13.63□□□□□ -0.23
AC087311.1-201ENST00000553060 SLC24A1O60721 1099 aa13.63□□□□□ -0.23
AC087311.1-201ENST00000553060 IFNL2Q8IZJ0 200 aa13.63□□□□□ -0.23
AC087311.1-201ENST00000553060 TESK2Q96S53 571 aa13.63□□□□□ -0.23
AC087311.1-201ENST00000553060 RC3H1Q5TC82 1133 aaKnown RBP13.62□□□□□ -0.23
AC087311.1-201ENST00000553060 RBM42Q9BTD8 480 aaKnown RBP13.62□□□□□ -0.23
AC087311.1-201ENST00000553060 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.62□□□□□ -0.23
AC087311.1-201ENST00000553060 TIMELESSQ9UNS1 1208 aa13.62□□□□□ -0.23
AC087311.1-201ENST00000553060 ITGB4P16144 1822 aa13.62□□□□□ -0.23
AC087311.1-201ENST00000553060 KDRP35968 1356 aa13.61□□□□□ -0.23
AC087311.1-201ENST00000553060 ST20-MTHFSA0A0A6YYL1 179 aa13.61□□□□□ -0.23
AC087311.1-201ENST00000553060 PHKG2P15735 406 aa13.61□□□□□ -0.23
AC087311.1-201ENST00000553060 EMILIN1Q9Y6C2 1016 aa13.61□□□□□ -0.23
AC087311.1-201ENST00000553060 C4AP0C0L4 1744 aa13.61□□□□□ -0.23
AC087311.1-201ENST00000553060 PKD1L3Q7Z443 1732 aa13.61□□□□□ -0.23
AC087311.1-201ENST00000553060 RPS6KA4O75676 772 aa13.6□□□□□ -0.23
AC087311.1-201ENST00000553060 NCAPD2Q15021 1401 aa13.6□□□□□ -0.23
AC087311.1-201ENST00000553060 SLC4A9Q96Q91 983 aa13.6□□□□□ -0.23
AC087311.1-201ENST00000553060 CNTNAP4Q9C0A0 1308 aa13.6□□□□□ -0.23
AC087311.1-201ENST00000553060 PPM1GO15355 546 aaPredicted RBP13.59□□□□□ -0.23
AC087311.1-201ENST00000553060 ZC3H4Q9UPT8 1303 aaKnown RBP13.59□□□□□ -0.23
AC087311.1-201ENST00000553060 VEGFAP15692 232 aaPredicted RBP13.58□□□□□ -0.24
AC087311.1-201ENST00000553060 CHRNA5P30532 468 aa13.58□□□□□ -0.24
AC087311.1-201ENST00000553060 TNRC6CQ9HCJ0 1690 aaKnown RBP13.57□□□□□ -0.24
AC087311.1-201ENST00000553060 GLTPD2A6NH11 291 aa13.57□□□□□ -0.24
AC087311.1-201ENST00000553060 EYA1Q99502 592 aa13.57□□□□□ -0.24
AC087311.1-201ENST00000553060 ERVV-2B6SEH9 535 aa13.56□□□□□ -0.24
AC087311.1-201ENST00000553060 RASSF7Q02833 373 aa13.56□□□□□ -0.24
AC087311.1-201ENST00000553060 DDR1Q08345 913 aa13.56□□□□□ -0.24
AC087311.1-201ENST00000553060 SRP68Q9UHB9 627 aaKnown RBP13.56□□□□□ -0.24
AC087311.1-201ENST00000553060 LMNB1P20700 586 aa13.55□□□□□ -0.24
AC087311.1-201ENST00000553060 FKBP8Q14318 412 aa13.55□□□□□ -0.24
AC087311.1-201ENST00000553060 WASHC2AQ641Q2 1341 aa13.55□□□□□ -0.24
AC087311.1-201ENST00000553060 ARFGEF1Q9Y6D6 1849 aa13.55□□□□□ -0.24
AC087311.1-201ENST00000553060 BRCA1P38398 1863 aaKnown RBP13.55□□□□□ -0.24
AC087311.1-201ENST00000553060 HSP90AB1P08238 724 aaKnown RBP13.54□□□□□ -0.24
AC087311.1-201ENST00000553060 USP42Q9H9J4 1324 aaKnown RBP13.54□□□□□ -0.24
AC087311.1-201ENST00000553060 KDM6AO15550 1401 aaPredicted RBP13.54□□□□□ -0.24
AC087311.1-201ENST00000553060 PCNTO95613 3336 aa13.54□□□□□ -0.24
AC087311.1-201ENST00000553060 POLRMTO00411 1230 aaKnown RBP13.53□□□□□ -0.24
AC087311.1-201ENST00000553060 SLC34A2O95436 690 aa13.53□□□□□ -0.24
AC087311.1-201ENST00000553060 CRKLP46109 303 aaKnown RBP13.53□□□□□ -0.24
AC087311.1-201ENST00000553060 PTCD1O75127 700 aaKnown RBP13.52□□□□□ -0.25
AC087311.1-201ENST00000553060 CABP4P57796 275 aa13.52□□□□□ -0.25
AC087311.1-201ENST00000553060 ZNF831Q5JPB2 1677 aa13.51□□□□□ -0.25
AC087311.1-201ENST00000553060 MKRN1Q9UHC7 482 aaKnown RBP13.51□□□□□ -0.25
AC087311.1-201ENST00000553060 TM4SF1P30408 202 aa13.5□□□□□ -0.25
AC087311.1-201ENST00000553060 DPY19L2Q6NUT2 758 aa13.5□□□□□ -0.25
AC087311.1-201ENST00000553060 CARD14Q9BXL6 1004 aa13.5□□□□□ -0.25
AC087311.1-201ENST00000553060 CREBZFQ9NS37 354 aa13.5□□□□□ -0.25
AC087311.1-201ENST00000553060 COL5A3P25940 1745 aaPredicted RBP13.5□□□□□ -0.25
AC087311.1-201ENST00000553060 POTECB2RU33 542 aa13.49□□□□□ -0.25
AC087311.1-201ENST00000553060 ZPR1O75312 459 aa13.49□□□□□ -0.25
AC087311.1-201ENST00000553060 EIF4A2Q14240 407 aaKnown RBP13.49□□□□□ -0.25
AC087311.1-201ENST00000553060 CDCA8Q53HL2 280 aa13.49□□□□□ -0.25
AC087311.1-201ENST00000553060 KIF20BQ96Q89 1820 aa13.48□□□□□ -0.25
AC087311.1-201ENST00000553060 FOXN1O15353 648 aa13.48□□□□□ -0.25
AC087311.1-201ENST00000553060 PLEKHO1Q53GL0 409 aaPredicted RBP13.48□□□□□ -0.25
AC087311.1-201ENST00000553060 USPL1Q5W0Q7 1092 aa13.48□□□□□ -0.25
AC087311.1-201ENST00000553060 TTLL6Q8N841 843 aa13.48□□□□□ -0.25
AC087311.1-201ENST00000553060 PRDM10Q9NQV6 1147 aa13.48□□□□□ -0.25
AC087311.1-201ENST00000553060 POLKQ9UBT6 870 aa13.48□□□□□ -0.25
AC087311.1-201ENST00000553060 CHADLQ6NUI6 762 aa13.47□□□□□ -0.25
AC087311.1-201ENST00000553060 ZNF530Q6P9A1 599 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms