RNA–Protein interactions for RNA: ENST00000552628.1

LINC02396-204, Transcript of long intergenic non-protein coding RNA 2396, humanhuman

TSL 4

Gene LINC02396, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02396-204ENST00000552628 IFNL2Q8IZJ0 200 aa20.86■□□□□ 0.93
LINC02396-204ENST00000552628 ITPK1Q13572 414 aa20.85■□□□□ 0.93
LINC02396-204ENST00000552628 RBM42Q9BTD8 480 aaKnown RBP20.85■□□□□ 0.93
LINC02396-204ENST00000552628 RTCBQ9Y3I0 505 aaKnown RBP20.85■□□□□ 0.93
LINC02396-204ENST00000552628 TOMM70O94826 608 aa20.84■□□□□ 0.93
LINC02396-204ENST00000552628 TGFB2P61812 414 aa20.84■□□□□ 0.93
LINC02396-204ENST00000552628 POLR3GLQ9BT43 218 aa20.84■□□□□ 0.93
LINC02396-204ENST00000552628 FCHSD2O94868 740 aa20.83■□□□□ 0.93
LINC02396-204ENST00000552628 C16orf71Q8IYS4 520 aaPredicted RBP20.83■□□□□ 0.93
LINC02396-204ENST00000552628 NLGN1Q8N2Q7 840 aa20.83■□□□□ 0.93
LINC02396-204ENST00000552628 ITGB4P16144 1822 aa20.83■□□□□ 0.92
LINC02396-204ENST00000552628 CEP350Q5VT06 3117 aa20.82■□□□□ 0.92
LINC02396-204ENST00000552628 EYA1Q99502 592 aa20.82■□□□□ 0.92
LINC02396-204ENST00000552628 PANK3Q9H999 370 aa20.82■□□□□ 0.92
LINC02396-204ENST00000552628 ATG3Q9NT62 314 aa20.82■□□□□ 0.92
LINC02396-204ENST00000552628 CCDC87Q9NVE4 849 aa20.82■□□□□ 0.92
LINC02396-204ENST00000552628 PHKG2P15735 406 aa20.81■□□□□ 0.92
LINC02396-204ENST00000552628 RFC4P35249 363 aa20.81■□□□□ 0.92
LINC02396-204ENST00000552628 PARP3Q9Y6F1 533 aa20.81■□□□□ 0.92
LINC02396-204ENST00000552628 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.8■□□□□ 0.92
LINC02396-204ENST00000552628 UBR3Q6ZT12 1888 aa20.79■□□□□ 0.92
LINC02396-204ENST00000552628 DPEP1P16444 411 aa20.79■□□□□ 0.92
LINC02396-204ENST00000552628 TNNT2P45379 298 aaPredicted RBP20.79■□□□□ 0.92
LINC02396-204ENST00000552628 WASHC2AQ641Q2 1341 aa20.78■□□□□ 0.92
LINC02396-204ENST00000552628 TOGARAM1Q9Y4F4 1720 aa20.78■□□□□ 0.92
LINC02396-204ENST00000552628 ARHGEF1Q92888 912 aaKnown RBP20.78■□□□□ 0.92
LINC02396-204ENST00000552628 NMRK2Q9NPI5 230 aa20.78■□□□□ 0.92
LINC02396-204ENST00000552628 MAP2P11137 1827 aaKnown RBP20.76■□□□□ 0.91
LINC02396-204ENST00000552628 C9orf131Q5VYM1 1079 aa20.75■□□□□ 0.91
LINC02396-204ENST00000552628 PXDNLA1KZ92 1463 aa20.75■□□□□ 0.91
LINC02396-204ENST00000552628 CABP4P57796 275 aa20.74■□□□□ 0.91
LINC02396-204ENST00000552628 ERVV-2B6SEH9 535 aa20.73■□□□□ 0.91
LINC02396-204ENST00000552628 HSP90AB1P08238 724 aaKnown RBP20.73■□□□□ 0.91
LINC02396-204ENST00000552628 DNAJC5GQ8N7S2 189 aa20.73■□□□□ 0.91
LINC02396-204ENST00000552628 PIM2Q9P1W9 311 aa20.73■□□□□ 0.91
LINC02396-204ENST00000552628 POLKQ9UBT6 870 aa20.73■□□□□ 0.91
LINC02396-204ENST00000552628 KNSTRNQ9Y448 316 aa20.73■□□□□ 0.91
LINC02396-204ENST00000552628 PKD1L3Q7Z443 1732 aa20.73■□□□□ 0.91
LINC02396-204ENST00000552628 CICQ96RK0 1608 aaPredicted RBP20.72■□□□□ 0.91
LINC02396-204ENST00000552628 RPS6KA4O75676 772 aa20.72■□□□□ 0.91
LINC02396-204ENST00000552628 GYS1P13807 737 aa20.72■□□□□ 0.91
LINC02396-204ENST00000552628 ADRA2BP18089 450 aa20.72■□□□□ 0.91
LINC02396-204ENST00000552628 PLEKHO1Q53GL0 409 aaPredicted RBP20.72■□□□□ 0.91
LINC02396-204ENST00000552628 RC3H1Q5TC82 1133 aaKnown RBP20.72■□□□□ 0.91
LINC02396-204ENST00000552628 PTCD1O75127 700 aaKnown RBP20.71■□□□□ 0.91
LINC02396-204ENST00000552628 EIF4A2Q14240 407 aaKnown RBP20.71■□□□□ 0.91
LINC02396-204ENST00000552628 N4BP2Q86UW6 1770 aaPredicted RBP20.71■□□□□ 0.91
LINC02396-204ENST00000552628 NPC1L1Q9UHC9 1359 aa20.71■□□□□ 0.91
LINC02396-204ENST00000552628 NCAPD2Q15021 1401 aa20.7■□□□□ 0.9
LINC02396-204ENST00000552628 PER1O15534 1290 aaPredicted RBP20.7■□□□□ 0.9
LINC02396-204ENST00000552628 HTRA3P83110 453 aa20.7■□□□□ 0.9
LINC02396-204ENST00000552628 DALRD3Q5D0E6 543 aaKnown RBP20.7■□□□□ 0.9
LINC02396-204ENST00000552628 AMER1Q5JTC6 1135 aaPredicted RBP20.7■□□□□ 0.9
LINC02396-204ENST00000552628 RBM46Q8TBY0 533 aaKnown RBP20.7■□□□□ 0.9
LINC02396-204ENST00000552628 DCAF5Q96JK2 942 aa20.7■□□□□ 0.9
LINC02396-204ENST00000552628 SLC4A9Q96Q91 983 aa20.7■□□□□ 0.9
LINC02396-204ENST00000552628 RRAGCQ9HB90 399 aa20.69■□□□□ 0.9
LINC02396-204ENST00000552628 KDM2BQ8NHM5 1336 aa20.69■□□□□ 0.9
LINC02396-204ENST00000552628 MTHFSP49914 203 aa20.68■□□□□ 0.9
LINC02396-204ENST00000552628 ZNF530Q6P9A1 599 aaPredicted RBP20.68■□□□□ 0.9
LINC02396-204ENST00000552628 RNF181Q9P0P0 153 aa20.68■□□□□ 0.9
LINC02396-204ENST00000552628 CAPN15O75808 1086 aa20.67■□□□□ 0.9
LINC02396-204ENST00000552628 CNTNAP4Q9C0A0 1308 aa20.67■□□□□ 0.9
LINC02396-204ENST00000552628 C1orf141Q5JVX7 400 aa20.66■□□□□ 0.9
LINC02396-204ENST00000552628 SRP68Q9UHB9 627 aaKnown RBP20.66■□□□□ 0.9
LINC02396-204ENST00000552628 C10orf71Q711Q0 1435 aa20.66■□□□□ 0.9
LINC02396-204ENST00000552628 PLEKHG2Q9H7P9 1386 aa20.65■□□□□ 0.9
LINC02396-204ENST00000552628 KCNA3P22001 575 aa20.65■□□□□ 0.9
LINC02396-204ENST00000552628 FSTL1Q12841 308 aa20.65■□□□□ 0.9
LINC02396-204ENST00000552628 KLRG1Q96E93 195 aa20.65■□□□□ 0.9
LINC02396-204ENST00000552628 CHRNA5P30532 468 aa20.64■□□□□ 0.89
LINC02396-204ENST00000552628 FKBP8Q14318 412 aa20.64■□□□□ 0.89
LINC02396-204ENST00000552628 AMOTQ4VCS5 1084 aa20.64■□□□□ 0.89
LINC02396-204ENST00000552628 MORC1Q86VD1 984 aa20.64■□□□□ 0.89
LINC02396-204ENST00000552628 NFATC2IPQ8NCF5 419 aa20.64■□□□□ 0.89
LINC02396-204ENST00000552628 KDRP35968 1356 aa20.63■□□□□ 0.89
LINC02396-204ENST00000552628 CRKLP46109 303 aaKnown RBP20.63■□□□□ 0.89
LINC02396-204ENST00000552628 ZPR1O75312 459 aa20.62■□□□□ 0.89
LINC02396-204ENST00000552628 COL13A1Q5TAT6 717 aaPredicted RBP20.62■□□□□ 0.89
LINC02396-204ENST00000552628 C4AP0C0L4 1744 aa20.61■□□□□ 0.89
LINC02396-204ENST00000552628 KIF13BQ9NQT8 1826 aa20.61■□□□□ 0.89
LINC02396-204ENST00000552628 KCPQ6ZWJ8 1503 aa20.6■□□□□ 0.89
LINC02396-204ENST00000552628 DDR1Q08345 913 aa20.59■□□□□ 0.89
LINC02396-204ENST00000552628 SMC1BQ8NDV3 1235 aa20.59■□□□□ 0.89
LINC02396-204ENST00000552628 USP42Q9H9J4 1324 aaKnown RBP20.58■□□□□ 0.89
LINC02396-204ENST00000552628 TNS4Q8IZW8 715 aa20.58■□□□□ 0.89
LINC02396-204ENST00000552628 KIAA1551Q9HCM1 1747 aa20.58■□□□□ 0.88
LINC02396-204ENST00000552628 ZEB1P37275 1124 aaPredicted RBP20.57■□□□□ 0.88
LINC02396-204ENST00000552628 USPL1Q5W0Q7 1092 aa20.57■□□□□ 0.88
LINC02396-204ENST00000552628 WDR90Q96KV7 1748 aa20.56■□□□□ 0.88
LINC02396-204ENST00000552628 SULT6B1Q6IMI4 303 aa20.56■□□□□ 0.88
LINC02396-204ENST00000552628 AEBP1Q8IUX7 1158 aa20.56■□□□□ 0.88
LINC02396-204ENST00000552628 JMYQ8N9B5 988 aa20.55■□□□□ 0.88
LINC02396-204ENST00000552628 KDM6AO15550 1401 aaPredicted RBP20.54■□□□□ 0.88
LINC02396-204ENST00000552628 POLRMTO00411 1230 aaKnown RBP20.54■□□□□ 0.88
LINC02396-204ENST00000552628 TM4SF1P30408 202 aa20.54■□□□□ 0.88
LINC02396-204ENST00000552628 RASSF7Q02833 373 aa20.54■□□□□ 0.88
LINC02396-204ENST00000552628 INTS5Q6P9B9 1019 aaKnown RBP20.54■□□□□ 0.88
LINC02396-204ENST00000552628 DNAJC10Q8IXB1 793 aa20.54■□□□□ 0.88
LINC02396-204ENST00000552628 VEGFAP15692 232 aaPredicted RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms