RNA–Protein interactions for RNA: ENST00000552022.5

CACNB3-221, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 564 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-221ENST00000552022 KCPQ6ZWJ8 1503 aa18■□□□□ 0.47
CACNB3-221ENST00000552022 HSP90AB2PQ58FF8 381 aa18■□□□□ 0.47
CACNB3-221ENST00000552022 SBF1O95248 1867 aa18■□□□□ 0.47
CACNB3-221ENST00000552022 SMG6Q86US8 1419 aaKnown RBP17.99■□□□□ 0.47
CACNB3-221ENST00000552022 KCNA3P22001 575 aa17.99■□□□□ 0.47
CACNB3-221ENST00000552022 NKX1-1Q15270 411 aaPredicted RBP17.99■□□□□ 0.47
CACNB3-221ENST00000552022 CARD11Q9BXL7 1154 aa17.99■□□□□ 0.47
CACNB3-221ENST00000552022 RRAGCQ9HB90 399 aa17.99■□□□□ 0.47
CACNB3-221ENST00000552022 ATP6V1AP38606 617 aa17.98■□□□□ 0.47
CACNB3-221ENST00000552022 NEUROD1Q13562 356 aa17.98■□□□□ 0.47
CACNB3-221ENST00000552022 NLGN1Q8N2Q7 840 aa17.98■□□□□ 0.47
CACNB3-221ENST00000552022 ASAP1Q9ULH1 1129 aa17.98■□□□□ 0.47
CACNB3-221ENST00000552022 PLEKHG2Q9H7P9 1386 aa17.98■□□□□ 0.47
CACNB3-221ENST00000552022 C4AP0C0L4 1744 aa17.98■□□□□ 0.47
CACNB3-221ENST00000552022 TNRC6CQ9HCJ0 1690 aaKnown RBP17.97■□□□□ 0.47
CACNB3-221ENST00000552022 INSRP06213 1382 aa17.97■□□□□ 0.47
CACNB3-221ENST00000552022 KDM2BQ8NHM5 1336 aa17.97■□□□□ 0.47
CACNB3-221ENST00000552022 FYB1O15117 783 aa17.96■□□□□ 0.47
CACNB3-221ENST00000552022 TMF1P82094 1093 aa17.96■□□□□ 0.47
CACNB3-221ENST00000552022 TRAPPC3LQ5T215 181 aa17.95■□□□□ 0.46
CACNB3-221ENST00000552022 CCDC87Q9NVE4 849 aa17.95■□□□□ 0.46
CACNB3-221ENST00000552022 HSPA1AP0DMV8 641 aaKnown RBP17.94■□□□□ 0.46
CACNB3-221ENST00000552022 HSPA1BP0DMV9 641 aaKnown RBP17.94■□□□□ 0.46
CACNB3-221ENST00000552022 SMC1BQ8NDV3 1235 aa17.94■□□□□ 0.46
CACNB3-221ENST00000552022 GGNBP2Q9H3C7 697 aa17.94■□□□□ 0.46
CACNB3-221ENST00000552022 TMOD3Q9NYL9 352 aa17.94■□□□□ 0.46
CACNB3-221ENST00000552022 ARHGEF1Q92888 912 aaKnown RBP17.93■□□□□ 0.46
CACNB3-221ENST00000552022 DCAF5Q96JK2 942 aa17.93■□□□□ 0.46
CACNB3-221ENST00000552022 ATG3Q9NT62 314 aa17.93■□□□□ 0.46
CACNB3-221ENST00000552022 RNF181Q9P0P0 153 aa17.93■□□□□ 0.46
CACNB3-221ENST00000552022 RTCBQ9Y3I0 505 aaKnown RBP17.93■□□□□ 0.46
CACNB3-221ENST00000552022 GYS1P13807 737 aa17.92■□□□□ 0.46
CACNB3-221ENST00000552022 PIM2Q9P1W9 311 aa17.92■□□□□ 0.46
CACNB3-221ENST00000552022 FLT4P35916 1363 aa17.91■□□□□ 0.46
CACNB3-221ENST00000552022 MYH14Q7Z406 1995 aaKnown RBP17.91■□□□□ 0.46
CACNB3-221ENST00000552022 SLC4A9Q96Q91 983 aa17.91■□□□□ 0.46
CACNB3-221ENST00000552022 TESK2Q96S53 571 aa17.91■□□□□ 0.46
CACNB3-221ENST00000552022 SPG7Q9UQ90 795 aa17.91■□□□□ 0.46
CACNB3-221ENST00000552022 PARP3Q9Y6F1 533 aa17.91■□□□□ 0.46
CACNB3-221ENST00000552022 COL5A3P25940 1745 aaPredicted RBP17.9■□□□□ 0.46
CACNB3-221ENST00000552022 DALRD3Q5D0E6 543 aaKnown RBP17.9■□□□□ 0.46
CACNB3-221ENST00000552022 NCAPD2Q15021 1401 aa17.89■□□□□ 0.46
CACNB3-221ENST00000552022 ZNF831Q5JPB2 1677 aa17.89■□□□□ 0.45
CACNB3-221ENST00000552022 KDRP35968 1356 aa17.89■□□□□ 0.45
CACNB3-221ENST00000552022 KIF24Q5T7B8 1368 aa17.89■□□□□ 0.45
CACNB3-221ENST00000552022 ADRA2BP18089 450 aa17.88■□□□□ 0.45
CACNB3-221ENST00000552022 RFC4P35249 363 aa17.88■□□□□ 0.45
CACNB3-221ENST00000552022 KIF20BQ96Q89 1820 aa17.87■□□□□ 0.45
CACNB3-221ENST00000552022 CCDC88AQ3V6T2 1871 aa17.87■□□□□ 0.45
CACNB3-221ENST00000552022 RC3H1Q5TC82 1133 aaKnown RBP17.87■□□□□ 0.45
CACNB3-221ENST00000552022 RPS6KA4O75676 772 aa17.86■□□□□ 0.45
CACNB3-221ENST00000552022 PHKG2P15735 406 aa17.86■□□□□ 0.45
CACNB3-221ENST00000552022 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.86■□□□□ 0.45
CACNB3-221ENST00000552022 EMILIN1Q9Y6C2 1016 aa17.86■□□□□ 0.45
CACNB3-221ENST00000552022 SLC34A2O95436 690 aa17.85■□□□□ 0.45
CACNB3-221ENST00000552022 CHRNA5P30532 468 aa17.85■□□□□ 0.45
CACNB3-221ENST00000552022 IFNL2Q8IZJ0 200 aa17.85■□□□□ 0.45
CACNB3-221ENST00000552022 TONSLQ96HA7 1378 aa17.84■□□□□ 0.45
CACNB3-221ENST00000552022 CNTNAP4Q9C0A0 1308 aa17.84■□□□□ 0.45
CACNB3-221ENST00000552022 ST20-MTHFSA0A0A6YYL1 179 aa17.84■□□□□ 0.45
CACNB3-221ENST00000552022 VEGFAP15692 232 aaPredicted RBP17.84■□□□□ 0.45
CACNB3-221ENST00000552022 RBM42Q9BTD8 480 aaKnown RBP17.84■□□□□ 0.45
CACNB3-221ENST00000552022 DDR1Q08345 913 aa17.83■□□□□ 0.44
CACNB3-221ENST00000552022 KDM6AO15550 1401 aaPredicted RBP17.82■□□□□ 0.44
CACNB3-221ENST00000552022 ZC3H4Q9UPT8 1303 aaKnown RBP17.82■□□□□ 0.44
CACNB3-221ENST00000552022 GLTPD2A6NH11 291 aa17.82■□□□□ 0.44
CACNB3-221ENST00000552022 FKBP8Q14318 412 aa17.82■□□□□ 0.44
CACNB3-221ENST00000552022 EYA1Q99502 592 aa17.82■□□□□ 0.44
CACNB3-221ENST00000552022 RASSF7Q02833 373 aa17.81■□□□□ 0.44
CACNB3-221ENST00000552022 SRP68Q9UHB9 627 aaKnown RBP17.81■□□□□ 0.44
CACNB3-221ENST00000552022 ANKRD26Q9UPS8 1709 aa17.81■□□□□ 0.44
CACNB3-221ENST00000552022 POTECB2RU33 542 aa17.79■□□□□ 0.44
CACNB3-221ENST00000552022 ERVV-2B6SEH9 535 aa17.79■□□□□ 0.44
CACNB3-221ENST00000552022 PPM1GO15355 546 aaPredicted RBP17.79■□□□□ 0.44
CACNB3-221ENST00000552022 TIAM2Q8IVF5 1701 aa17.78■□□□□ 0.44
CACNB3-221ENST00000552022 WASHC2AQ641Q2 1341 aa17.78■□□□□ 0.44
CACNB3-221ENST00000552022 LMNB1P20700 586 aa17.78■□□□□ 0.44
CACNB3-221ENST00000552022 AFDNP55196 1824 aaKnown RBP17.77■□□□□ 0.44
CACNB3-221ENST00000552022 USP42Q9H9J4 1324 aaKnown RBP17.77■□□□□ 0.44
CACNB3-221ENST00000552022 POLRMTO00411 1230 aaKnown RBP17.77■□□□□ 0.44
CACNB3-221ENST00000552022 SLC24A1O60721 1099 aa17.77■□□□□ 0.44
CACNB3-221ENST00000552022 TM4SF1P30408 202 aa17.77■□□□□ 0.44
CACNB3-221ENST00000552022 ADAMTS7Q9UKP4 1686 aa17.77■□□□□ 0.43
CACNB3-221ENST00000552022 CRKLP46109 303 aaKnown RBP17.76■□□□□ 0.43
CACNB3-221ENST00000552022 FOXN1O15353 648 aa17.75■□□□□ 0.43
CACNB3-221ENST00000552022 CARD14Q9BXL6 1004 aa17.75■□□□□ 0.43
CACNB3-221ENST00000552022 MKRN1Q9UHC7 482 aaKnown RBP17.75■□□□□ 0.43
CACNB3-221ENST00000552022 DLEC1Q9Y238 1755 aa17.75■□□□□ 0.43
CACNB3-221ENST00000552022 TJP1Q07157 1748 aa17.73■□□□□ 0.43
CACNB3-221ENST00000552022 DICER1Q9UPY3 1922 aaKnown RBP17.73■□□□□ 0.43
CACNB3-221ENST00000552022 PTCD1O75127 700 aaKnown RBP17.73■□□□□ 0.43
CACNB3-221ENST00000552022 CREBZFQ9NS37 354 aa17.73■□□□□ 0.43
CACNB3-221ENST00000552022 PRDM10Q9NQV6 1147 aa17.72■□□□□ 0.43
CACNB3-221ENST00000552022 CABP4P57796 275 aa17.71■□□□□ 0.43
CACNB3-221ENST00000552022 NRXN2Q9P2S2 1712 aa17.71■□□□□ 0.43
CACNB3-221ENST00000552022 NFKBIEO00221 500 aa17.7■□□□□ 0.42
CACNB3-221ENST00000552022 HSP90AB1P08238 724 aaKnown RBP17.7■□□□□ 0.42
CACNB3-221ENST00000552022 INTS5Q6P9B9 1019 aaKnown RBP17.7■□□□□ 0.42
CACNB3-221ENST00000552022 POLKQ9UBT6 870 aa17.7■□□□□ 0.42
CACNB3-221ENST00000552022 EIF4A2Q14240 407 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms