RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 ZNF526Q8TF50 670 aaPredicted RBP20.42■□□□□ 0.86
TMEM106C-216ENST00000551305 SLC4A9Q96Q91 983 aa20.42■□□□□ 0.86
TMEM106C-216ENST00000551305 RBM42Q9BTD8 480 aaKnown RBP20.4■□□□□ 0.86
TMEM106C-216ENST00000551305 PANK3Q9H999 370 aa20.4■□□□□ 0.86
TMEM106C-216ENST00000551305 GPBP1L1Q9HC44 474 aaPredicted RBP20.4■□□□□ 0.86
TMEM106C-216ENST00000551305 MMP10P09238 476 aa20.39■□□□□ 0.85
TMEM106C-216ENST00000551305 TRAPPC3LQ5T215 181 aa20.38■□□□□ 0.85
TMEM106C-216ENST00000551305 ADCY9O60503 1353 aa20.38■□□□□ 0.85
TMEM106C-216ENST00000551305 HSPA5P11021 654 aaKnown RBP20.37■□□□□ 0.85
TMEM106C-216ENST00000551305 KDRP35968 1356 aa20.37■□□□□ 0.85
TMEM106C-216ENST00000551305 ERVV-2B6SEH9 535 aa20.36■□□□□ 0.85
TMEM106C-216ENST00000551305 PLEKHO1Q53GL0 409 aaPredicted RBP20.36■□□□□ 0.85
TMEM106C-216ENST00000551305 RTCBQ9Y3I0 505 aaKnown RBP20.36■□□□□ 0.85
TMEM106C-216ENST00000551305 ZNF530Q6P9A1 599 aaPredicted RBP20.35■□□□□ 0.85
TMEM106C-216ENST00000551305 ARHGEF1Q92888 912 aaKnown RBP20.35■□□□□ 0.85
TMEM106C-216ENST00000551305 DCAF5Q96JK2 942 aa20.35■□□□□ 0.85
TMEM106C-216ENST00000551305 EIF4G2P78344 907 aaKnown RBP eCLIP20.34■□□□□ 0.85
TMEM106C-216ENST00000551305 AEBP1Q8IUX7 1158 aa20.34■□□□□ 0.85
TMEM106C-216ENST00000551305 KDM6AO15550 1401 aaPredicted RBP20.34■□□□□ 0.85
TMEM106C-216ENST00000551305 HSP90AB1P08238 724 aaKnown RBP20.34■□□□□ 0.85
TMEM106C-216ENST00000551305 CABP4P57796 275 aa20.34■□□□□ 0.85
TMEM106C-216ENST00000551305 A0A0G2JLW4 131 aa20.33■□□□□ 0.84
TMEM106C-216ENST00000551305 RC3H1Q5TC82 1133 aaKnown RBP20.33■□□□□ 0.84
TMEM106C-216ENST00000551305 CLSPNQ9HAW4 1339 aa20.32■□□□□ 0.84
TMEM106C-216ENST00000551305 MTHFSP49914 203 aa20.32■□□□□ 0.84
TMEM106C-216ENST00000551305 MORC1Q86VD1 984 aa20.32■□□□□ 0.84
TMEM106C-216ENST00000551305 NLGN1Q8N2Q7 840 aa20.32■□□□□ 0.84
TMEM106C-216ENST00000551305 PXDNLA1KZ92 1463 aa20.31■□□□□ 0.84
TMEM106C-216ENST00000551305 PLEKHG2Q9H7P9 1386 aa20.31■□□□□ 0.84
TMEM106C-216ENST00000551305 CNTNAP4Q9C0A0 1308 aa20.31■□□□□ 0.84
TMEM106C-216ENST00000551305 PTCD1O75127 700 aaKnown RBP20.31■□□□□ 0.84
TMEM106C-216ENST00000551305 RPS6KA4O75676 772 aa20.31■□□□□ 0.84
TMEM106C-216ENST00000551305 GYS1P13807 737 aa20.31■□□□□ 0.84
TMEM106C-216ENST00000551305 AMOTQ4VCS5 1084 aa20.31■□□□□ 0.84
TMEM106C-216ENST00000551305 CICQ96RK0 1608 aaPredicted RBP20.3■□□□□ 0.84
TMEM106C-216ENST00000551305 RFC4P35249 363 aa20.3■□□□□ 0.84
TMEM106C-216ENST00000551305 TGFB2P61812 414 aa20.3■□□□□ 0.84
TMEM106C-216ENST00000551305 SULT6B1Q6IMI4 303 aa20.3■□□□□ 0.84
TMEM106C-216ENST00000551305 NFATC2IPQ8NCF5 419 aa20.3■□□□□ 0.84
TMEM106C-216ENST00000551305 BCS1LQ9Y276 419 aa20.3■□□□□ 0.84
TMEM106C-216ENST00000551305 ADRA2BP18089 450 aa20.29■□□□□ 0.84
TMEM106C-216ENST00000551305 N4BP2Q86UW6 1770 aaPredicted RBP20.28■□□□□ 0.84
TMEM106C-216ENST00000551305 KIF3CO14782 793 aa20.28■□□□□ 0.84
TMEM106C-216ENST00000551305 DPEP1P16444 411 aa20.28■□□□□ 0.84
TMEM106C-216ENST00000551305 C1orf141Q5JVX7 400 aa20.28■□□□□ 0.84
TMEM106C-216ENST00000551305 HSPA6P17066 643 aa20.27■□□□□ 0.84
TMEM106C-216ENST00000551305 CCDC87Q9NVE4 849 aa20.27■□□□□ 0.84
TMEM106C-216ENST00000551305 KIAA1551Q9HCM1 1747 aa20.27■□□□□ 0.83
TMEM106C-216ENST00000551305 IL13P35225 146 aa20.26■□□□□ 0.83
TMEM106C-216ENST00000551305 ARHGAP27Q6ZUM4 889 aa20.26■□□□□ 0.83
TMEM106C-216ENST00000551305 SRP68Q9UHB9 627 aaKnown RBP20.26■□□□□ 0.83
TMEM106C-216ENST00000551305 PARP3Q9Y6F1 533 aa20.26■□□□□ 0.83
TMEM106C-216ENST00000551305 C10orf71Q711Q0 1435 aa20.26■□□□□ 0.83
TMEM106C-216ENST00000551305 COL5A3P25940 1745 aaPredicted RBP20.26■□□□□ 0.83
TMEM106C-216ENST00000551305 ZNF831Q5JPB2 1677 aa20.26■□□□□ 0.83
TMEM106C-216ENST00000551305 KIF13BQ9NQT8 1826 aa20.26■□□□□ 0.83
TMEM106C-216ENST00000551305 CRKLP46109 303 aaKnown RBP20.25■□□□□ 0.83
TMEM106C-216ENST00000551305 MYH14Q7Z406 1995 aaKnown RBP20.25■□□□□ 0.83
TMEM106C-216ENST00000551305 FCHSD2O94868 740 aa20.23■□□□□ 0.83
TMEM106C-216ENST00000551305 KCNA3P22001 575 aa20.23■□□□□ 0.83
TMEM106C-216ENST00000551305 FKBP8Q14318 412 aa20.23■□□□□ 0.83
TMEM106C-216ENST00000551305 KNSTRNQ9Y448 316 aa20.23■□□□□ 0.83
TMEM106C-216ENST00000551305 C4AP0C0L4 1744 aa20.23■□□□□ 0.83
TMEM106C-216ENST00000551305 INTS5Q6P9B9 1019 aaKnown RBP20.21■□□□□ 0.83
TMEM106C-216ENST00000551305 LGR6Q9HBX8 967 aa20.21■□□□□ 0.83
TMEM106C-216ENST00000551305 CEP350Q5VT06 3117 aa20.21■□□□□ 0.83
TMEM106C-216ENST00000551305 DDR1Q08345 913 aa20.21■□□□□ 0.83
TMEM106C-216ENST00000551305 USP42Q9H9J4 1324 aaKnown RBP20.2■□□□□ 0.82
TMEM106C-216ENST00000551305 DNAJC10Q8IXB1 793 aa20.2■□□□□ 0.82
TMEM106C-216ENST00000551305 AKAP4Q5JQC9 854 aa20.19■□□□□ 0.82
TMEM106C-216ENST00000551305 AMER1Q5JTC6 1135 aaPredicted RBP20.19■□□□□ 0.82
TMEM106C-216ENST00000551305 IFFO2Q5TF58 517 aa20.19■□□□□ 0.82
TMEM106C-216ENST00000551305 HMOX1P09601 288 aa20.18■□□□□ 0.82
TMEM106C-216ENST00000551305 TJP1Q07157 1748 aa20.18■□□□□ 0.82
TMEM106C-216ENST00000551305 SLC39A6Q13433 755 aa20.18■□□□□ 0.82
TMEM106C-216ENST00000551305 NMRK2Q9NPI5 230 aa20.18■□□□□ 0.82
TMEM106C-216ENST00000551305 CHRNA5P30532 468 aa20.17■□□□□ 0.82
TMEM106C-216ENST00000551305 C9orf131Q5VYM1 1079 aa20.17■□□□□ 0.82
TMEM106C-216ENST00000551305 CCER1Q8TC90 406 aaPredicted RBP20.17■□□□□ 0.82
TMEM106C-216ENST00000551305 SLC52A2Q9HAB3 445 aa20.17■□□□□ 0.82
TMEM106C-216ENST00000551305 PIM2Q9P1W9 311 aa20.17■□□□□ 0.82
TMEM106C-216ENST00000551305 TM4SF1P30408 202 aa20.16■□□□□ 0.82
TMEM106C-216ENST00000551305 USPL1Q5W0Q7 1092 aa20.16■□□□□ 0.82
TMEM106C-216ENST00000551305 POLRMTO00411 1230 aaKnown RBP20.15■□□□□ 0.82
TMEM106C-216ENST00000551305 RNMTO43148 476 aaKnown RBP20.15■□□□□ 0.82
TMEM106C-216ENST00000551305 SCN11AQ9UI33 1791 aa20.15■□□□□ 0.82
TMEM106C-216ENST00000551305 BRCA1P38398 1863 aaKnown RBP20.15■□□□□ 0.82
TMEM106C-216ENST00000551305 TOMM70O94826 608 aa20.14■□□□□ 0.81
TMEM106C-216ENST00000551305 DALRD3Q5D0E6 543 aaKnown RBP20.14■□□□□ 0.81
TMEM106C-216ENST00000551305 ZPR1O75312 459 aa20.13■□□□□ 0.81
TMEM106C-216ENST00000551305 CYP19A1P11511 503 aaPredicted RBP20.13■□□□□ 0.81
TMEM106C-216ENST00000551305 MTHFSDQ2M296 383 aaKnown RBP20.13■□□□□ 0.81
TMEM106C-216ENST00000551305 SOS1Q07889 1333 aaPredicted RBP20.13■□□□□ 0.81
TMEM106C-216ENST00000551305 KIF7Q2M1P5 1343 aa20.13■□□□□ 0.81
TMEM106C-216ENST00000551305 ADAMTS7Q9UKP4 1686 aa20.12■□□□□ 0.81
TMEM106C-216ENST00000551305 APLP1P51693 650 aa20.1■□□□□ 0.81
TMEM106C-216ENST00000551305 CC2D1BQ5T0F9 858 aaKnown RBP20.1■□□□□ 0.81
TMEM106C-216ENST00000551305 ZBTB1Q9Y2K1 713 aa20.1■□□□□ 0.81
TMEM106C-216ENST00000551305 NFIXQ14938 502 aa20.09■□□□□ 0.81
TMEM106C-216ENST00000551305 RNF181Q9P0P0 153 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms