RNA–Protein interactions for RNA: ENST00000550811.1

TUBA1A-208, Transcript of tubulin alpha 1a, human

TSL 4

Gene TUBA1A, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1A-208	ENST00000550811	RUNDC1	Q96C34	613 aa		12.58	□□□□□ -0.4
TUBA1A-208	ENST00000550811	PLEKHF1	Q96S99	279 aa		12.58	□□□□□ -0.4
TUBA1A-208	ENST00000550811	DLG5	Q8TDM6	1919 aa		12.57	□□□□□ -0.4
TUBA1A-208	ENST00000550811	TNS2	Q63HR2	1409 aa		12.57	□□□□□ -0.4
TUBA1A-208	ENST00000550811	MNX1	P50219	401 aa	Predicted RBP	12.57	□□□□□ -0.4
TUBA1A-208	ENST00000550811	BARGIN	Q6ZT62	677 aa		12.56	□□□□□ -0.4
TUBA1A-208	ENST00000550811	CDCA7	Q9BWT1	371 aa	Predicted RBP	12.56	□□□□□ -0.4
TUBA1A-208	ENST00000550811	AMOT	Q4VCS5	1084 aa		12.55	□□□□□ -0.4
TUBA1A-208	ENST00000550811	GJD4	Q96KN9	370 aa	Predicted RBP	12.55	□□□□□ -0.4
TUBA1A-208	ENST00000550811	CLEC11A	Q9Y240	323 aa		12.55	□□□□□ -0.4
TUBA1A-208	ENST00000550811	VIRMA	Q69YN4	1812 aa	Known RBP	12.55	□□□□□ -0.4
TUBA1A-208	ENST00000550811	PLEKHO1	Q53GL0	409 aa	Predicted RBP	12.54	□□□□□ -0.4
TUBA1A-208	ENST00000550811	ZNF467	Q7Z7K2	595 aa	Predicted RBP	12.54	□□□□□ -0.4
TUBA1A-208	ENST00000550811	REM2	Q8IYK8	340 aa	Predicted RBP	12.54	□□□□□ -0.4
TUBA1A-208	ENST00000550811	RASEF	Q8IZ41	740 aa		12.54	□□□□□ -0.4
TUBA1A-208	ENST00000550811	GAS2L2	Q8NHY3	880 aa		12.54	□□□□□ -0.4
TUBA1A-208	ENST00000550811	PHACTR3	Q96KR7	559 aa		12.54	□□□□□ -0.4
TUBA1A-208	ENST00000550811	QTRT2	Q9H974	415 aa	Known RBP	12.54	□□□□□ -0.4
TUBA1A-208	ENST00000550811	APAF1	O14727	1248 aa		12.53	□□□□□ -0.4
TUBA1A-208	ENST00000550811	FXR2	P51116	673 aa	Known RBP eCLIP	12.53	□□□□□ -0.4
TUBA1A-208	ENST00000550811	NFE2L2	Q16236	605 aa		12.53	□□□□□ -0.4
TUBA1A-208	ENST00000550811	FAM98C	Q17RN3	349 aa	Known RBP	12.53	□□□□□ -0.4
TUBA1A-208	ENST00000550811	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	12.53	□□□□□ -0.4
TUBA1A-208	ENST00000550811	DAXX	Q9UER7	740 aa	Predicted RBP	12.53	□□□□□ -0.4
TUBA1A-208	ENST00000550811	SPG7	Q9UQ90	795 aa		12.53	□□□□□ -0.4
TUBA1A-208	ENST00000550811	PCDH11X	Q9BZA7	1347 aa		12.53	□□□□□ -0.4
TUBA1A-208	ENST00000550811	PCDH11Y	Q9BZA8	1340 aa		12.53	□□□□□ -0.4
TUBA1A-208	ENST00000550811	MAP3K5	Q99683	1374 aa		12.53	□□□□□ -0.4
TUBA1A-208	ENST00000550811		A0A0G2JS52	829 aa		12.52	□□□□□ -0.41
TUBA1A-208	ENST00000550811	PYGB	P11216	843 aa		12.52	□□□□□ -0.41
TUBA1A-208	ENST00000550811	HNRNPU	Q00839	825 aa	Known RBP eCLIP	12.52	□□□□□ -0.41
TUBA1A-208	ENST00000550811	MYT1	Q01538	1121 aa		12.52	□□□□□ -0.41
TUBA1A-208	ENST00000550811	MTHFSD	Q2M296	383 aa	Known RBP	12.52	□□□□□ -0.41
TUBA1A-208	ENST00000550811	ZNF530	Q6P9A1	599 aa	Predicted RBP	12.52	□□□□□ -0.41
TUBA1A-208	ENST00000550811	TMPO	P42166	694 aa	Known RBP	12.51	□□□□□ -0.41
TUBA1A-208	ENST00000550811	RBM6	P78332	1123 aa	Known RBP	12.51	□□□□□ -0.41
TUBA1A-208	ENST00000550811	C1orf141	Q5JVX7	400 aa		12.51	□□□□□ -0.41
TUBA1A-208	ENST00000550811	HOMEZ	Q8IX15	550 aa		12.51	□□□□□ -0.41
TUBA1A-208	ENST00000550811	ZCRB1	Q8TBF4	217 aa	Known RBP	12.51	□□□□□ -0.41
TUBA1A-208	ENST00000550811	RRP7A	Q9Y3A4	280 aa	Known RBP	12.51	□□□□□ -0.41
TUBA1A-208	ENST00000550811	ADAMTS7	Q9UKP4	1686 aa		12.51	□□□□□ -0.41
TUBA1A-208	ENST00000550811	SCN11A	Q9UI33	1791 aa		12.51	□□□□□ -0.41
TUBA1A-208	ENST00000550811	LMOD3	Q0VAK6	560 aa		12.5	□□□□□ -0.41
TUBA1A-208	ENST00000550811	DDB1	Q16531	1140 aa		12.5	□□□□□ -0.41
TUBA1A-208	ENST00000550811	NGEF	Q8N5V2	710 aa		12.5	□□□□□ -0.41
TUBA1A-208	ENST00000550811	YTHDC1	Q96MU7	727 aa	Known RBP	12.5	□□□□□ -0.41
TUBA1A-208	ENST00000550811	RGS17	Q9UGC6	210 aa	Predicted RBP	12.5	□□□□□ -0.41
TUBA1A-208	ENST00000550811	BRWD3	Q6RI45	1802 aa		12.5	□□□□□ -0.41
TUBA1A-208	ENST00000550811	SENP3-EIF4A1	A0A087X0R7	540 aa		12.49	□□□□□ -0.41
TUBA1A-208	ENST00000550811	EXOC5	O00471	708 aa		12.49	□□□□□ -0.41
TUBA1A-208	ENST00000550811	RIPK4	P57078	832 aa		12.49	□□□□□ -0.41
TUBA1A-208	ENST00000550811	NEUROD2	Q15784	382 aa		12.49	□□□□□ -0.41
TUBA1A-208	ENST00000550811	AKAP4	Q5JQC9	854 aa		12.49	□□□□□ -0.41
TUBA1A-208	ENST00000550811	KCNV2	Q8TDN2	545 aa		12.49	□□□□□ -0.41
TUBA1A-208	ENST00000550811	ARHGEF1	Q92888	912 aa	Known RBP	12.49	□□□□□ -0.41
TUBA1A-208	ENST00000550811	DOT1L	Q8TEK3	1739 aa		12.48	□□□□□ -0.41
TUBA1A-208	ENST00000550811	TOGARAM1	Q9Y4F4	1720 aa		12.48	□□□□□ -0.41
TUBA1A-208	ENST00000550811	RGS12	O14924	1447 aa		12.48	□□□□□ -0.41
TUBA1A-208	ENST00000550811	GNAT3	A8MTJ3	354 aa		12.48	□□□□□ -0.41
TUBA1A-208	ENST00000550811	CYP27B1	O15528	508 aa		12.48	□□□□□ -0.41
TUBA1A-208	ENST00000550811	PHKG2	P15735	406 aa		12.48	□□□□□ -0.41
TUBA1A-208	ENST00000550811	RXRB	P28702	533 aa		12.48	□□□□□ -0.41
TUBA1A-208	ENST00000550811	IFNL2	Q8IZJ0	200 aa		12.48	□□□□□ -0.41
TUBA1A-208	ENST00000550811	RTF1	Q92541	710 aa	Known RBP	12.48	□□□□□ -0.41
TUBA1A-208	ENST00000550811	MRC1	P22897	1456 aa		12.47	□□□□□ -0.41
TUBA1A-208	ENST00000550811	KDM6A	O15550	1401 aa	Predicted RBP	12.47	□□□□□ -0.41
TUBA1A-208	ENST00000550811	ZBED9	Q6R2W3	1325 aa		12.47	□□□□□ -0.41
TUBA1A-208	ENST00000550811	ONECUT3	O60422	494 aa	Predicted RBP	12.47	□□□□□ -0.41
TUBA1A-208	ENST00000550811	HSP90AB1	P08238	724 aa	Known RBP	12.47	□□□□□ -0.41
TUBA1A-208	ENST00000550811	CCDC27	Q2M243	656 aa		12.47	□□□□□ -0.41
TUBA1A-208	ENST00000550811	POTEA	Q6S8J7	498 aa		12.47	□□□□□ -0.41
TUBA1A-208	ENST00000550811	SEPT12	Q8IYM1	358 aa		12.47	□□□□□ -0.41
TUBA1A-208	ENST00000550811	SALL2	Q9Y467	1007 aa	Predicted RBP	12.47	□□□□□ -0.41
TUBA1A-208	ENST00000550811	SIPA1L3	O60292	1781 aa	Predicted RBP	12.46	□□□□□ -0.41
TUBA1A-208	ENST00000550811	HTATSF1	O43719	755 aa	Known RBP	12.46	□□□□□ -0.41
TUBA1A-208	ENST00000550811	DDX54	Q8TDD1	881 aa	Known RBP	12.46	□□□□□ -0.41
TUBA1A-208	ENST00000550811	TRIM35	Q9UPQ4	493 aa		12.46	□□□□□ -0.41
TUBA1A-208	ENST00000550811	CEMIP	Q8WUJ3	1361 aa		12.45	□□□□□ -0.42
TUBA1A-208	ENST00000550811	PDE3B	Q13370	1112 aa		12.45	□□□□□ -0.42
TUBA1A-208	ENST00000550811	PDAP1	Q13442	181 aa	Known RBP	12.45	□□□□□ -0.42
TUBA1A-208	ENST00000550811	WWC1	Q8IX03	1113 aa		12.45	□□□□□ -0.42
TUBA1A-208	ENST00000550811	ITGB4	P16144	1822 aa		12.44	□□□□□ -0.42
TUBA1A-208	ENST00000550811	ZNF521	Q96K83	1311 aa		12.44	□□□□□ -0.42
TUBA1A-208	ENST00000550811	MPRIP	Q6WCQ1	1025 aa		12.44	□□□□□ -0.42
TUBA1A-208	ENST00000550811	MCM10	Q7L590	875 aa		12.44	□□□□□ -0.42
TUBA1A-208	ENST00000550811	DCAF5	Q96JK2	942 aa		12.44	□□□□□ -0.42
TUBA1A-208	ENST00000550811	NHS	Q6T4R5	1651 aa		12.44	□□□□□ -0.42
TUBA1A-208	ENST00000550811	PITPNM1	O00562	1244 aa		12.43	□□□□□ -0.42
TUBA1A-208	ENST00000550811	RNMT	O43148	476 aa	Known RBP	12.43	□□□□□ -0.42
TUBA1A-208	ENST00000550811	CALD1	Q05682	793 aa	Known RBP	12.43	□□□□□ -0.42
TUBA1A-208	ENST00000550811	DCTN1	Q14203	1278 aa		12.43	□□□□□ -0.42
TUBA1A-208	ENST00000550811	MARCH10	Q8NA82	808 aa	Predicted RBP	12.43	□□□□□ -0.42
TUBA1A-208	ENST00000550811	SBF2	Q86WG5	1849 aa		12.42	□□□□□ -0.42
TUBA1A-208	ENST00000550811	PAPPA	Q13219	1627 aa		12.42	□□□□□ -0.42
TUBA1A-208	ENST00000550811	KRT27	Q7Z3Y8	459 aa		12.42	□□□□□ -0.42
TUBA1A-208	ENST00000550811	IL17RE	Q8NFR9	667 aa		12.42	□□□□□ -0.42
TUBA1A-208	ENST00000550811	THUMPD2	Q9BTF0	503 aa	Known RBP	12.42	□□□□□ -0.42
TUBA1A-208	ENST00000550811	KDM3B	Q7LBC6	1761 aa		12.42	□□□□□ -0.42
TUBA1A-208	ENST00000550811	BCL9	O00512	1426 aa		12.42	□□□□□ -0.42
TUBA1A-208	ENST00000550811	IL16	Q14005	1332 aa		12.41	□□□□□ -0.42

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