RNA–Protein interactions for RNA: ENST00000550790.1

PACS2-210, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 3

Gene PACS2, Length 1,163 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-210ENST00000550790 HSP90AB1P08238 724 aaKnown RBP29.07■■■□□ 2.24
PACS2-210ENST00000550790 SSFA2P28290 1259 aa29.07■■■□□ 2.24
PACS2-210ENST00000550790 IL13P35225 146 aa29.07■■■□□ 2.24
PACS2-210ENST00000550790 ATP6V1AP38606 617 aa29.07■■■□□ 2.24
PACS2-210ENST00000550790 PER1O15534 1290 aaPredicted RBP29.06■■■□□ 2.24
PACS2-210ENST00000550790 SLC4A9Q96Q91 983 aa29.06■■■□□ 2.24
PACS2-210ENST00000550790 CD2APQ9Y5K6 639 aa29.06■■■□□ 2.24
PACS2-210ENST00000550790 CHD4Q14839 1912 aa29.04■■■□□ 2.24
PACS2-210ENST00000550790 PHF14O94880 888 aa29.04■■■□□ 2.24
PACS2-210ENST00000550790 ZNF530Q6P9A1 599 aaPredicted RBP29.04■■■□□ 2.24
PACS2-210ENST00000550790 UBR3Q6ZT12 1888 aa29.04■■■□□ 2.24
PACS2-210ENST00000550790 SULT6B1Q6IMI4 303 aa29.03■■■□□ 2.24
PACS2-210ENST00000550790 KDM6AO15550 1401 aaPredicted RBP29.03■■■□□ 2.24
PACS2-210ENST00000550790 KDRP35968 1356 aa29.02■■■□□ 2.24
PACS2-210ENST00000550790 YBX3P16989 372 aaKnown RBP eCLIP29.02■■■□□ 2.24
PACS2-210ENST00000550790 PELP1Q8IZL8 1130 aaKnown RBP29■■■□□ 2.23
PACS2-210ENST00000550790 GNPATO15228 680 aa28.99■■■□□ 2.23
PACS2-210ENST00000550790 MTHFSP49914 203 aa28.99■■■□□ 2.23
PACS2-210ENST00000550790 GRIN3BO60391 1043 aa28.98■■■□□ 2.23
PACS2-210ENST00000550790 CABP4P57796 275 aa28.97■■■□□ 2.23
PACS2-210ENST00000550790 RC3H1Q5TC82 1133 aaKnown RBP28.97■■■□□ 2.23
PACS2-210ENST00000550790 RBM42Q9BTD8 480 aaKnown RBP28.96■■■□□ 2.23
PACS2-210ENST00000550790 C1orf141Q5JVX7 400 aa28.95■■■□□ 2.22
PACS2-210ENST00000550790 ZNF831Q5JPB2 1677 aa28.94■■■□□ 2.22
PACS2-210ENST00000550790 NFATC2IPQ8NCF5 419 aa28.94■■■□□ 2.22
PACS2-210ENST00000550790 TRAPPC3LQ5T215 181 aa28.92■■■□□ 2.22
PACS2-210ENST00000550790 RTCBQ9Y3I0 505 aaKnown RBP28.92■■■□□ 2.22
PACS2-210ENST00000550790 CNTNAP4Q9C0A0 1308 aa28.91■■■□□ 2.22
PACS2-210ENST00000550790 RPS6KA4O75676 772 aa28.9■■■□□ 2.22
PACS2-210ENST00000550790 ARHGEF1Q92888 912 aaKnown RBP28.9■■■□□ 2.22
PACS2-210ENST00000550790 AKAP4Q5JQC9 854 aa28.89■■■□□ 2.22
PACS2-210ENST00000550790 ADRA2BP18089 450 aa28.88■■■□□ 2.21
PACS2-210ENST00000550790 CC2D1BQ5T0F9 858 aaKnown RBP28.88■■■□□ 2.21
PACS2-210ENST00000550790 PTCD1O75127 700 aaKnown RBP28.87■■■□□ 2.21
PACS2-210ENST00000550790 NPC1L1Q9UHC9 1359 aa28.87■■■□□ 2.21
PACS2-210ENST00000550790 MMP10P09238 476 aa28.86■■■□□ 2.21
PACS2-210ENST00000550790 NLGN1Q8N2Q7 840 aa28.86■■■□□ 2.21
PACS2-210ENST00000550790 LGR6Q9HBX8 967 aa28.86■■■□□ 2.21
PACS2-210ENST00000550790 HMOX1P09601 288 aa28.85■■■□□ 2.21
PACS2-210ENST00000550790 DIAPH1O60610 1272 aaKnown RBP28.84■■■□□ 2.21
PACS2-210ENST00000550790 GYS1P13807 737 aa28.84■■■□□ 2.21
PACS2-210ENST00000550790 COL5A3P25940 1745 aaPredicted RBP28.83■■■□□ 2.21
PACS2-210ENST00000550790 SLC52A2Q9HAB3 445 aa28.83■■■□□ 2.21
PACS2-210ENST00000550790 MYH14Q7Z406 1995 aaKnown RBP28.82■■■□□ 2.2
PACS2-210ENST00000550790 RNMTO43148 476 aaKnown RBP28.81■■■□□ 2.2
PACS2-210ENST00000550790 CRKLP46109 303 aaKnown RBP28.81■■■□□ 2.2
PACS2-210ENST00000550790 C1QTNF8P60827 252 aa28.81■■■□□ 2.2
PACS2-210ENST00000550790 MTHFSDQ2M296 383 aaKnown RBP28.81■■■□□ 2.2
PACS2-210ENST00000550790 RFC4P35249 363 aa28.8■■■□□ 2.2
PACS2-210ENST00000550790 INTS5Q6P9B9 1019 aaKnown RBP28.79■■■□□ 2.2
PACS2-210ENST00000550790 SCN11AQ9UI33 1791 aa28.79■■■□□ 2.2
PACS2-210ENST00000550790 TGFB2P61812 414 aa28.76■■■□□ 2.19
PACS2-210ENST00000550790 COL3A1P02461 1466 aaPredicted RBP28.75■■■□□ 2.19
PACS2-210ENST00000550790 WWC3Q9ULE0 1092 aa28.75■■■□□ 2.19
PACS2-210ENST00000550790 MRC1P22897 1456 aa28.74■■■□□ 2.19
PACS2-210ENST00000550790 CICQ96RK0 1608 aaPredicted RBP28.74■■■□□ 2.19
PACS2-210ENST00000550790 SLC39A6Q13433 755 aa28.74■■■□□ 2.19
PACS2-210ENST00000550790 DNAJC10Q8IXB1 793 aa28.73■■■□□ 2.19
PACS2-210ENST00000550790 PXDNLA1KZ92 1463 aa28.72■■■□□ 2.19
PACS2-210ENST00000550790 TJP1Q07157 1748 aa28.72■■■□□ 2.19
PACS2-210ENST00000550790 C10orf71Q711Q0 1435 aa28.72■■■□□ 2.19
PACS2-210ENST00000550790 SRP68Q9UHB9 627 aaKnown RBP28.72■■■□□ 2.19
PACS2-210ENST00000550790 USP42Q9H9J4 1324 aaKnown RBP28.71■■■□□ 2.19
PACS2-210ENST00000550790 KIF13BQ9NQT8 1826 aa28.71■■■□□ 2.19
PACS2-210ENST00000550790 ADAMTS7Q9UKP4 1686 aa28.71■■■□□ 2.19
PACS2-210ENST00000550790 A0A0G2JLW4 131 aa28.71■■■□□ 2.19
PACS2-210ENST00000550790 GIGYF1O75420 1035 aaPredicted RBP28.71■■■□□ 2.19
PACS2-210ENST00000550790 CYP19A1P11511 503 aaPredicted RBP28.71■■■□□ 2.19
PACS2-210ENST00000550790 FKBP8Q14318 412 aa28.71■■■□□ 2.19
PACS2-210ENST00000550790 PARP3Q9Y6F1 533 aa28.71■■■□□ 2.19
PACS2-210ENST00000550790 ADCY9O60503 1353 aa28.71■■■□□ 2.19
PACS2-210ENST00000550790 CCDC87Q9NVE4 849 aa28.7■■■□□ 2.18
PACS2-210ENST00000550790 ATP10DQ9P241 1426 aa28.69■■■□□ 2.18
PACS2-210ENST00000550790 CNGB1Q14028 1251 aaPredicted RBP28.69■■■□□ 2.18
PACS2-210ENST00000550790 VSIG10Q8N0Z9 540 aa28.68■■■□□ 2.18
PACS2-210ENST00000550790 C4AP0C0L4 1744 aa28.68■■■□□ 2.18
PACS2-210ENST00000550790 KIAA1551Q9HCM1 1747 aa28.68■■■□□ 2.18
PACS2-210ENST00000550790 DPEP1P16444 411 aa28.67■■■□□ 2.18
PACS2-210ENST00000550790 KCNA3P22001 575 aa28.67■■■□□ 2.18
PACS2-210ENST00000550790 TM4SF1P30408 202 aa28.67■■■□□ 2.18
PACS2-210ENST00000550790 IL17REQ8NFR9 667 aa28.67■■■□□ 2.18
PACS2-210ENST00000550790 KCPQ6ZWJ8 1503 aa28.67■■■□□ 2.18
PACS2-210ENST00000550790 SOS1Q07889 1333 aaPredicted RBP28.67■■■□□ 2.18
PACS2-210ENST00000550790 U2SURPO15042 1029 aaKnown RBP28.66■■■□□ 2.18
PACS2-210ENST00000550790 DDR1Q08345 913 aa28.66■■■□□ 2.18
PACS2-210ENST00000550790 GNAT3A8MTJ3 354 aa28.62■■■□□ 2.17
PACS2-210ENST00000550790 GAS2L2Q8NHY3 880 aa28.62■■■□□ 2.17
PACS2-210ENST00000550790 BCS1LQ9Y276 419 aa28.62■■■□□ 2.17
PACS2-210ENST00000550790 N4BP2Q86UW6 1770 aaPredicted RBP28.61■■■□□ 2.17
PACS2-210ENST00000550790 SENP3-EIF4A1A0A087X0R7 540 aa28.61■■■□□ 2.17
PACS2-210ENST00000550790 POLRMTO00411 1230 aaKnown RBP28.61■■■□□ 2.17
PACS2-210ENST00000550790 USPL1Q5W0Q7 1092 aa28.61■■■□□ 2.17
PACS2-210ENST00000550790 PHACTR3Q96KR7 559 aa28.61■■■□□ 2.17
PACS2-210ENST00000550790 ZBTB1Q9Y2K1 713 aa28.61■■■□□ 2.17
PACS2-210ENST00000550790 CEP350Q5VT06 3117 aa28.61■■■□□ 2.17
PACS2-210ENST00000550790 ZPR1O75312 459 aa28.6■■■□□ 2.17
PACS2-210ENST00000550790 GPBP1L1Q9HC44 474 aaPredicted RBP28.6■■■□□ 2.17
PACS2-210ENST00000550790 NARFQ9UHQ1 456 aa28.6■■■□□ 2.17
PACS2-210ENST00000550790 VIRMAQ69YN4 1812 aaKnown RBP28.58■■■□□ 2.17
PACS2-210ENST00000550790 RSPH6AQ9H0K4 717 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms