RNA–Protein interactions for RNA: ENST00000550716.1

ATP2B1-207, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2B1, Length 486 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-207ENST00000550716 THRAP3Q9Y2W1 955 aaKnown RBP12.53□□□□□ -0.4
ATP2B1-207ENST00000550716 BRD4O60885 1362 aaPredicted RBP12.53□□□□□ -0.4
ATP2B1-207ENST00000550716 COL18A1P39060 1754 aa12.53□□□□□ -0.4
ATP2B1-207ENST00000550716 CPSF1Q10570 1443 aaKnown RBP12.53□□□□□ -0.4
ATP2B1-207ENST00000550716 TTC21BQ7Z4L5 1316 aa12.52□□□□□ -0.41
ATP2B1-207ENST00000550716 EVI5O60447 810 aa12.51□□□□□ -0.41
ATP2B1-207ENST00000550716 PCGF6Q9BYE7 350 aa12.51□□□□□ -0.41
ATP2B1-207ENST00000550716 EVC2Q86UK5 1308 aa12.51□□□□□ -0.41
ATP2B1-207ENST00000550716 ROCK2O75116 1388 aaKnown RBP12.51□□□□□ -0.41
ATP2B1-207ENST00000550716 OVOS2A0A0G2JMS6 1433 aa12.51□□□□□ -0.41
ATP2B1-207ENST00000550716 OVOS2A0A0J9YW53 1432 aa12.51□□□□□ -0.41
ATP2B1-207ENST00000550716 OVOS2Q6IE36 1432 aa12.51□□□□□ -0.41
ATP2B1-207ENST00000550716 DPYSL4O14531 572 aa12.5□□□□□ -0.41
ATP2B1-207ENST00000550716 NEUROD1Q13562 356 aa12.5□□□□□ -0.41
ATP2B1-207ENST00000550716 E2F4Q16254 413 aa12.5□□□□□ -0.41
ATP2B1-207ENST00000550716 TOM1L2Q6ZVM7 507 aa12.5□□□□□ -0.41
ATP2B1-207ENST00000550716 ARHGEF25Q86VW2 580 aa12.5□□□□□ -0.41
ATP2B1-207ENST00000550716 ANO8Q9HCE9 1232 aaPredicted RBP12.5□□□□□ -0.41
ATP2B1-207ENST00000550716 WDR17Q8IZU2 1322 aa12.5□□□□□ -0.41
ATP2B1-207ENST00000550716 NFAT5O94916 1531 aa12.5□□□□□ -0.41
ATP2B1-207ENST00000550716 MARCH10Q8NA82 808 aaPredicted RBP12.49□□□□□ -0.41
ATP2B1-207ENST00000550716 DDB1Q16531 1140 aa12.48□□□□□ -0.41
ATP2B1-207ENST00000550716 ZNF687Q8N1G0 1237 aa12.48□□□□□ -0.41
ATP2B1-207ENST00000550716 WNK3Q9BYP7 1800 aa12.48□□□□□ -0.41
ATP2B1-207ENST00000550716 PDGFDQ9GZP0 370 aaPredicted RBP12.47□□□□□ -0.41
ATP2B1-207ENST00000550716 AKAP12Q02952 1782 aa12.47□□□□□ -0.41
ATP2B1-207ENST00000550716 CD163L1Q9NR16 1453 aa12.46□□□□□ -0.41
ATP2B1-207ENST00000550716 NBPF14Q5TI25 921 aa12.46□□□□□ -0.41
ATP2B1-207ENST00000550716 KRTAP3-3Q9BYR6 98 aa12.46□□□□□ -0.41
ATP2B1-207ENST00000550716 KRTAP3-2Q9BYR7 98 aa12.46□□□□□ -0.41
ATP2B1-207ENST00000550716 KTN1Q86UP2 1357 aaKnown RBP12.45□□□□□ -0.42
ATP2B1-207ENST00000550716 SBNO2Q9Y2G9 1366 aa12.44□□□□□ -0.42
ATP2B1-207ENST00000550716 SBF2Q86WG5 1849 aa12.44□□□□□ -0.42
ATP2B1-207ENST00000550716 TTC21AQ8NDW8 1320 aa12.44□□□□□ -0.42
ATP2B1-207ENST00000550716 CSB-PGBD3P0DP91 1061 aa12.44□□□□□ -0.42
ATP2B1-207ENST00000550716 PPP4R3BQ5MIZ7 849 aa12.44□□□□□ -0.42
ATP2B1-207ENST00000550716 NME9Q86XW9 330 aa12.44□□□□□ -0.42
ATP2B1-207ENST00000550716 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.44□□□□□ -0.42
ATP2B1-207ENST00000550716 CARD10Q9BWT7 1032 aa12.44□□□□□ -0.42
ATP2B1-207ENST00000550716 BCL9O00512 1426 aa12.44□□□□□ -0.42
ATP2B1-207ENST00000550716 RGPD3A6NKT7 1758 aaPredicted RBP12.43□□□□□ -0.42
ATP2B1-207ENST00000550716 RGPD4Q7Z3J3 1758 aa12.43□□□□□ -0.42
ATP2B1-207ENST00000550716 RGPD5Q99666 1765 aa12.43□□□□□ -0.42
ATP2B1-207ENST00000550716 MON2Q7Z3U7 1717 aa12.43□□□□□ -0.42
ATP2B1-207ENST00000550716 PLSCR1O15162 318 aa12.43□□□□□ -0.42
ATP2B1-207ENST00000550716 ZNF454Q8N9F8 522 aa12.43□□□□□ -0.42
ATP2B1-207ENST00000550716 KCNH5Q8NCM2 988 aa12.43□□□□□ -0.42
ATP2B1-207ENST00000550716 TNS2Q63HR2 1409 aa12.43□□□□□ -0.42
ATP2B1-207ENST00000550716 KCNQ2O43526 872 aa12.42□□□□□ -0.42
ATP2B1-207ENST00000550716 SPON1Q9HCB6 807 aa12.42□□□□□ -0.42
ATP2B1-207ENST00000550716 CASZ1Q86V15 1759 aa12.42□□□□□ -0.42
ATP2B1-207ENST00000550716 USP31Q70CQ4 1352 aa12.42□□□□□ -0.42
ATP2B1-207ENST00000550716 C11orf95C9JLR9 678 aaPredicted RBP12.41□□□□□ -0.42
ATP2B1-207ENST00000550716 CDCA7Q9BWT1 371 aaPredicted RBP12.41□□□□□ -0.42
ATP2B1-207ENST00000550716 ABCC6O95255 1503 aa12.41□□□□□ -0.42
ATP2B1-207ENST00000550716 UTRNP46939 3433 aa12.4□□□□□ -0.42
ATP2B1-207ENST00000550716 ZBTB7AO95365 584 aa12.4□□□□□ -0.42
ATP2B1-207ENST00000550716 TXNRD1Q16881 649 aa12.4□□□□□ -0.42
ATP2B1-207ENST00000550716 CARD11Q9BXL7 1154 aa12.4□□□□□ -0.42
ATP2B1-207ENST00000550716 SLC12A5Q9H2X9 1139 aa12.4□□□□□ -0.42
ATP2B1-207ENST00000550716 USP54Q70EL1 1684 aa12.4□□□□□ -0.42
ATP2B1-207ENST00000550716 CCDC7Q96M83 1385 aa12.4□□□□□ -0.42
ATP2B1-207ENST00000550716 ACSBG1Q96GR2 724 aa12.39□□□□□ -0.43
ATP2B1-207ENST00000550716 PPP1R1BQ9UD71 204 aaPredicted RBP12.39□□□□□ -0.43
ATP2B1-207ENST00000550716 A0A1W2PP64 1363 aa12.39□□□□□ -0.43
ATP2B1-207ENST00000550716 EXOC5O00471 708 aa12.38□□□□□ -0.43
ATP2B1-207ENST00000550716 FOSBP53539 338 aa12.38□□□□□ -0.43
ATP2B1-207ENST00000550716 PDIA6Q15084 440 aa12.38□□□□□ -0.43
ATP2B1-207ENST00000550716 TMC1Q8TDI8 760 aa12.38□□□□□ -0.43
ATP2B1-207ENST00000550716 KCNV2Q8TDN2 545 aa12.38□□□□□ -0.43
ATP2B1-207ENST00000550716 PLSCR2Q9NRY7 297 aa12.38□□□□□ -0.43
ATP2B1-207ENST00000550716 NLRP2Q9NX02 1062 aa12.38□□□□□ -0.43
ATP2B1-207ENST00000550716 NINLQ9Y2I6 1382 aa12.38□□□□□ -0.43
ATP2B1-207ENST00000550716 PBX2P40425 430 aa12.37□□□□□ -0.43
ATP2B1-207ENST00000550716 PTGER2P43116 358 aa12.37□□□□□ -0.43
ATP2B1-207ENST00000550716 ANKRD24Q8TF21 1146 aa12.37□□□□□ -0.43
ATP2B1-207ENST00000550716 MYOM1P52179 1685 aa12.37□□□□□ -0.43
ATP2B1-207ENST00000550716 NHSQ6T4R5 1651 aa12.37□□□□□ -0.43
ATP2B1-207ENST00000550716 EDC4Q6P2E9 1401 aaKnown RBP12.37□□□□□ -0.43
ATP2B1-207ENST00000550716 YY1P25490 414 aa12.36□□□□□ -0.43
ATP2B1-207ENST00000550716 POTEEQ6S8J3 1075 aa12.36□□□□□ -0.43
ATP2B1-207ENST00000550716 PAPPAQ13219 1627 aa12.36□□□□□ -0.43
ATP2B1-207ENST00000550716 SLC15A2Q16348 729 aa12.35□□□□□ -0.43
ATP2B1-207ENST00000550716 TESK2Q96S53 571 aa12.35□□□□□ -0.43
ATP2B1-207ENST00000550716 STK32BQ9NY57 414 aa12.35□□□□□ -0.43
ATP2B1-207ENST00000550716 ARIH1Q9Y4X5 557 aaPredicted RBP12.35□□□□□ -0.43
ATP2B1-207ENST00000550716 LTN1O94822 1766 aa12.35□□□□□ -0.43
ATP2B1-207ENST00000550716 SPDYE16A6NNV3 312 aaPredicted RBP12.34□□□□□ -0.43
ATP2B1-207ENST00000550716 IL2RBP14784 551 aa12.34□□□□□ -0.43
ATP2B1-207ENST00000550716 FBLN1P23142 703 aa12.34□□□□□ -0.43
ATP2B1-207ENST00000550716 ZNF827Q17R98 1081 aa12.34□□□□□ -0.43
ATP2B1-207ENST00000550716 HDGFL2Q7Z4V5 671 aaPredicted RBP12.34□□□□□ -0.43
ATP2B1-207ENST00000550716 TONSLQ96HA7 1378 aa12.33□□□□□ -0.44
ATP2B1-207ENST00000550716 LSM11P83369 360 aaKnown RBP eCLIP12.33□□□□□ -0.44
ATP2B1-207ENST00000550716 DDX12PQ92771 950 aa12.33□□□□□ -0.44
ATP2B1-207ENST00000550716 LTV1Q96GA3 475 aaPredicted RBP12.33□□□□□ -0.44
ATP2B1-207ENST00000550716 KCNK17Q96T54 332 aa12.33□□□□□ -0.44
ATP2B1-207ENST00000550716 LRRC4BQ9NT99 713 aa12.33□□□□□ -0.44
ATP2B1-207ENST00000550716 ARHGAP33O14559 1287 aa12.32□□□□□ -0.44
ATP2B1-207ENST00000550716 ZDHHC16Q969W1 377 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms