RNA–Protein interactions for RNA: ENST00000550636.1

LINC02396-202, Transcript of long intergenic non-protein coding RNA 2396, humanhuman

TSL 2 BASIC

Gene LINC02396, Length 2,324 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02396-202ENST00000550636 SPG7Q9UQ90 795 aa18.34■□□□□ 0.53
LINC02396-202ENST00000550636 HDGFL1Q5TGJ6 251 aa18.34■□□□□ 0.53
LINC02396-202ENST00000550636 CAMTA1Q9Y6Y1 1673 aa18.33■□□□□ 0.53
LINC02396-202ENST00000550636 COL18A1P39060 1754 aa18.33■□□□□ 0.53
LINC02396-202ENST00000550636 F6X3S4 739 aa18.33■□□□□ 0.52
LINC02396-202ENST00000550636 FLIIQ13045 1269 aa18.33■□□□□ 0.52
LINC02396-202ENST00000550636 C8orf34Q49A92 452 aa18.33■□□□□ 0.52
LINC02396-202ENST00000550636 SLC4A10Q6U841 1118 aa18.33■□□□□ 0.52
LINC02396-202ENST00000550636 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.33■□□□□ 0.52
LINC02396-202ENST00000550636 ZBTB47Q9UFB7 747 aaPredicted RBP18.33■□□□□ 0.52
LINC02396-202ENST00000550636 EIF2S2P20042 333 aaKnown RBP18.32■□□□□ 0.52
LINC02396-202ENST00000550636 NPM2Q86SE8 214 aaKnown RBP18.32■□□□□ 0.52
LINC02396-202ENST00000550636 USP35Q9P2H5 1018 aa18.32■□□□□ 0.52
LINC02396-202ENST00000550636 LMO7Q8WWI1 1683 aa18.31■□□□□ 0.52
LINC02396-202ENST00000550636 FKBP5Q13451 457 aaPredicted RBP18.31■□□□□ 0.52
LINC02396-202ENST00000550636 NBR1Q14596 966 aa18.31■□□□□ 0.52
LINC02396-202ENST00000550636 CHMP4AQ9BY43 222 aa18.31■□□□□ 0.52
LINC02396-202ENST00000550636 HOXB7P09629 217 aa18.3■□□□□ 0.52
LINC02396-202ENST00000550636 PHKG2P15735 406 aa18.3■□□□□ 0.52
LINC02396-202ENST00000550636 CCT4P50991 539 aaKnown RBP18.3■□□□□ 0.52
LINC02396-202ENST00000550636 SIRT2Q8IXJ6 389 aa18.3■□□□□ 0.52
LINC02396-202ENST00000550636 IFNL2Q8IZJ0 200 aa18.3■□□□□ 0.52
LINC02396-202ENST00000550636 ABCC6O95255 1503 aa18.3■□□□□ 0.52
LINC02396-202ENST00000550636 TOM1L2Q6ZVM7 507 aa18.29■□□□□ 0.52
LINC02396-202ENST00000550636 CRYBG1Q9Y4K1 1723 aa18.29■□□□□ 0.52
LINC02396-202ENST00000550636 OVOS2A0A0G2JMS6 1433 aa18.29■□□□□ 0.52
LINC02396-202ENST00000550636 MEGF6O75095 1541 aa18.28■□□□□ 0.52
LINC02396-202ENST00000550636 GCC1Q96CN9 775 aa18.28■□□□□ 0.52
LINC02396-202ENST00000550636 WDR17Q8IZU2 1322 aa18.28■□□□□ 0.52
LINC02396-202ENST00000550636 MEIS3Q99687 375 aa18.28■□□□□ 0.52
LINC02396-202ENST00000550636 NUCB1Q02818 461 aa18.27■□□□□ 0.52
LINC02396-202ENST00000550636 PHAXQ9H814 394 aaKnown RBP18.27■□□□□ 0.51
LINC02396-202ENST00000550636 CYP27B1O15528 508 aa18.26■□□□□ 0.51
LINC02396-202ENST00000550636 EVA1CP58658 441 aa18.26■□□□□ 0.51
LINC02396-202ENST00000550636 ANKRD45Q5TZF3 282 aa18.26■□□□□ 0.51
LINC02396-202ENST00000550636 NFATC2IPQ8NCF5 419 aa18.26■□□□□ 0.51
LINC02396-202ENST00000550636 SLC52A2Q9HAB3 445 aa18.26■□□□□ 0.51
LINC02396-202ENST00000550636 FAM208AQ9UK61 1670 aaKnown RBP18.25■□□□□ 0.51
LINC02396-202ENST00000550636 GIGYF1O75420 1035 aaPredicted RBP18.25■□□□□ 0.51
LINC02396-202ENST00000550636 CHD1LQ86WJ1 897 aa18.25■□□□□ 0.51
LINC02396-202ENST00000550636 RPAP2Q8IXW5 612 aaPredicted RBP18.25■□□□□ 0.51
LINC02396-202ENST00000550636 LNPKQ9C0E8 428 aa18.25■□□□□ 0.51
LINC02396-202ENST00000550636 STRN4Q9NRL3 753 aa18.25■□□□□ 0.51
LINC02396-202ENST00000550636 CHPF2Q9P2E5 772 aa18.25■□□□□ 0.51
LINC02396-202ENST00000550636 DCAF5Q96JK2 942 aa18.24■□□□□ 0.51
LINC02396-202ENST00000550636 ANKRD44Q8N8A2 993 aa18.24■□□□□ 0.51
LINC02396-202ENST00000550636 PLEKHG2Q9H7P9 1386 aa18.24■□□□□ 0.51
LINC02396-202ENST00000550636 HSP90AB1P08238 724 aaKnown RBP18.23■□□□□ 0.51
LINC02396-202ENST00000550636 SLC39A6Q13433 755 aa18.23■□□□□ 0.51
LINC02396-202ENST00000550636 CEP85Q6P2H3 762 aa18.23■□□□□ 0.51
LINC02396-202ENST00000550636 ZNF790Q6PG37 636 aa18.23■□□□□ 0.51
LINC02396-202ENST00000550636 KDM6AO15550 1401 aaPredicted RBP18.23■□□□□ 0.51
LINC02396-202ENST00000550636 KDM3BQ7LBC6 1761 aa18.23■□□□□ 0.51
LINC02396-202ENST00000550636 CARD10Q9BWT7 1032 aa18.22■□□□□ 0.51
LINC02396-202ENST00000550636 ZCRB1Q8TBF4 217 aaKnown RBP18.22■□□□□ 0.51
LINC02396-202ENST00000550636 DBF4Q9UBU7 674 aaPredicted RBP18.22■□□□□ 0.51
LINC02396-202ENST00000550636 COL5A2P05997 1499 aaPredicted RBP18.22■□□□□ 0.51
LINC02396-202ENST00000550636 HEG1Q9ULI3 1381 aa18.21■□□□□ 0.51
LINC02396-202ENST00000550636 NHSL1Q5SYE7 1610 aa18.21■□□□□ 0.51
LINC02396-202ENST00000550636 PRAMEF22A3QJZ6 481 aa18.21■□□□□ 0.51
LINC02396-202ENST00000550636 ANXA1P04083 346 aa18.21■□□□□ 0.51
LINC02396-202ENST00000550636 LARP1Q6PKG0 1096 aaKnown RBP18.21■□□□□ 0.51
LINC02396-202ENST00000550636 DCTPP1Q9H773 170 aa18.21■□□□□ 0.51
LINC02396-202ENST00000550636 GNAI2P04899 355 aa18.2■□□□□ 0.5
LINC02396-202ENST00000550636 GNAI3P08754 354 aa18.2■□□□□ 0.5
LINC02396-202ENST00000550636 IL2RBP14784 551 aa18.2■□□□□ 0.5
LINC02396-202ENST00000550636 CABP4P57796 275 aa18.2■□□□□ 0.5
LINC02396-202ENST00000550636 CACNA1FO60840 1977 aa18.19■□□□□ 0.5
LINC02396-202ENST00000550636 ATP10DQ9P241 1426 aa18.19■□□□□ 0.5
LINC02396-202ENST00000550636 PI4KAP2A4QPH2 592 aa18.18■□□□□ 0.5
LINC02396-202ENST00000550636 PI4KAP1Q8N8J0 262 aa18.18■□□□□ 0.5
LINC02396-202ENST00000550636 ADAMTS7Q9UKP4 1686 aa18.18■□□□□ 0.5
LINC02396-202ENST00000550636 PCDH11XQ9BZA7 1347 aa18.17■□□□□ 0.5
LINC02396-202ENST00000550636 PCDH11YQ9BZA8 1340 aa18.17■□□□□ 0.5
LINC02396-202ENST00000550636 TTC5Q8N0Z6 440 aa18.17■□□□□ 0.5
LINC02396-202ENST00000550636 BTG4Q9NY30 223 aa18.17■□□□□ 0.5
LINC02396-202ENST00000550636 HMMRO75330 724 aa18.17■□□□□ 0.5
LINC02396-202ENST00000550636 SEC24BO95487 1268 aa18.17■□□□□ 0.5
LINC02396-202ENST00000550636 DNAAF4Q8WXU2 420 aa18.17■□□□□ 0.5
LINC02396-202ENST00000550636 SRCIN1Q9C0H9 1055 aa18.17■□□□□ 0.5
LINC02396-202ENST00000550636 VIRMAQ69YN4 1812 aaKnown RBP18.17■□□□□ 0.5
LINC02396-202ENST00000550636 PROSER3Q2NL68 480 aa18.16■□□□□ 0.5
LINC02396-202ENST00000550636 USP44Q9H0E7 712 aa18.16■□□□□ 0.5
LINC02396-202ENST00000550636 DDX54Q8TDD1 881 aaKnown RBP18.16■□□□□ 0.5
LINC02396-202ENST00000550636 ZNF496Q96IT1 587 aaPredicted RBP18.16■□□□□ 0.5
LINC02396-202ENST00000550636 ANO8Q9HCE9 1232 aaPredicted RBP18.16■□□□□ 0.5
LINC02396-202ENST00000550636 HYPKQ9NX55 129 aa18.16■□□□□ 0.5
LINC02396-202ENST00000550636 SIPA1L3O60292 1781 aaPredicted RBP18.14■□□□□ 0.5
LINC02396-202ENST00000550636 SCN11AQ9UI33 1791 aa18.14■□□□□ 0.5
LINC02396-202ENST00000550636 ABCA3Q99758 1704 aa18.14■□□□□ 0.49
LINC02396-202ENST00000550636 DDX21Q9NR30 783 aaKnown RBP eCLIP18.14■□□□□ 0.49
LINC02396-202ENST00000550636 PXDNLA1KZ92 1463 aa18.14■□□□□ 0.49
LINC02396-202ENST00000550636 LTBP4Q8N2S1 1624 aa18.14■□□□□ 0.49
LINC02396-202ENST00000550636 UBTFL1P0CB47 393 aaPredicted RBP18.14■□□□□ 0.49
LINC02396-202ENST00000550636 BEND3Q5T5X7 828 aa18.14■□□□□ 0.49
LINC02396-202ENST00000550636 PKD1L3Q7Z443 1732 aa18.13■□□□□ 0.49
LINC02396-202ENST00000550636 SNRPA1P09661 255 aaKnown RBP18.13■□□□□ 0.49
LINC02396-202ENST00000550636 FMNL2Q96PY5 1086 aa18.13■□□□□ 0.49
LINC02396-202ENST00000550636 LRRFIP2Q9Y608 721 aaKnown RBP18.13■□□□□ 0.49
LINC02396-202ENST00000550636 ROBO1Q9Y6N7 1651 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms