RNA–Protein interactions for RNA: ENST00000549971.5

CACNB3-212, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 549 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-212ENST00000549971 BTBD11A6QL63 1104 aa15.99■□□□□ 0.15
CACNB3-212ENST00000549971 PIP4K2BP78356 416 aa15.99■□□□□ 0.15
CACNB3-212ENST00000549971 MPRIPQ6WCQ1 1025 aa15.99■□□□□ 0.15
CACNB3-212ENST00000549971 CENPQQ7L2Z9 268 aaPredicted RBP15.99■□□□□ 0.15
CACNB3-212ENST00000549971 ZCRB1Q8TBF4 217 aaKnown RBP15.99■□□□□ 0.15
CACNB3-212ENST00000549971 BTG4Q9NY30 223 aa15.99■□□□□ 0.15
CACNB3-212ENST00000549971 ELL2O00472 640 aaPredicted RBP15.98■□□□□ 0.15
CACNB3-212ENST00000549971 PANK1Q8TE04 598 aa15.98■□□□□ 0.15
CACNB3-212ENST00000549971 LGR6Q9HBX8 967 aa15.98■□□□□ 0.15
CACNB3-212ENST00000549971 STRN4Q9NRL3 753 aa15.98■□□□□ 0.15
CACNB3-212ENST00000549971 COG6Q9Y2V7 657 aa15.98■□□□□ 0.15
CACNB3-212ENST00000549971 THRAP3Q9Y2W1 955 aaKnown RBP15.98■□□□□ 0.15
CACNB3-212ENST00000549971 ABCC4O15439 1325 aa15.97■□□□□ 0.15
CACNB3-212ENST00000549971 EIF4A1P60842 406 aaKnown RBP15.97■□□□□ 0.15
CACNB3-212ENST00000549971 NKX1-1Q15270 411 aaPredicted RBP15.97■□□□□ 0.15
CACNB3-212ENST00000549971 LARP1Q6PKG0 1096 aaKnown RBP15.97■□□□□ 0.15
CACNB3-212ENST00000549971 SLC52A2Q9HAB3 445 aa15.97■□□□□ 0.15
CACNB3-212ENST00000549971 SCN11AQ9UI33 1791 aa15.97■□□□□ 0.15
CACNB3-212ENST00000549971 NWD2Q9ULI1 1742 aa15.97■□□□□ 0.15
CACNB3-212ENST00000549971 SPATA31A6Q5VVP1 1343 aa15.96■□□□□ 0.15
CACNB3-212ENST00000549971 KDM6AO15550 1401 aaPredicted RBP15.96■□□□□ 0.15
CACNB3-212ENST00000549971 SIPA1L3O60292 1781 aaPredicted RBP15.96■□□□□ 0.15
CACNB3-212ENST00000549971 DISP2A7MBM2 1401 aa15.95■□□□□ 0.14
CACNB3-212ENST00000549971 ERVV-2B6SEH9 535 aa15.95■□□□□ 0.14
CACNB3-212ENST00000549971 CYP27B1O15528 508 aa15.95■□□□□ 0.14
CACNB3-212ENST00000549971 MIS18AQ9NYP9 233 aa15.95■□□□□ 0.14
CACNB3-212ENST00000549971 RLBP1P12271 317 aa15.94■□□□□ 0.14
CACNB3-212ENST00000549971 ITPRIPQ8IWB1 547 aa15.94■□□□□ 0.14
CACNB3-212ENST00000549971 HEG1Q9ULI3 1381 aa15.94■□□□□ 0.14
CACNB3-212ENST00000549971 SLIT2O94813 1529 aa15.94■□□□□ 0.14
CACNB3-212ENST00000549971 SLC4A2P04920 1241 aa15.93■□□□□ 0.14
CACNB3-212ENST00000549971 NRAPQ86VF7 1730 aa15.93■□□□□ 0.14
CACNB3-212ENST00000549971 CABP4P57796 275 aa15.92■□□□□ 0.14
CACNB3-212ENST00000549971 KRT24Q2M2I5 525 aa15.92■□□□□ 0.14
CACNB3-212ENST00000549971 HDGFL1Q5TGJ6 251 aa15.92■□□□□ 0.14
CACNB3-212ENST00000549971 TTC5Q8N0Z6 440 aa15.92■□□□□ 0.14
CACNB3-212ENST00000549971 TMEM57Q8N5G2 664 aa15.92■□□□□ 0.14
CACNB3-212ENST00000549971 KDM2BQ8NHM5 1336 aa15.92■□□□□ 0.14
CACNB3-212ENST00000549971 PXDNLA1KZ92 1463 aa15.91■□□□□ 0.14
CACNB3-212ENST00000549971 CACNA1FO60840 1977 aa15.91■□□□□ 0.14
CACNB3-212ENST00000549971 LRP6O75581 1613 aa15.91■□□□□ 0.14
CACNB3-212ENST00000549971 INTS3Q68E01 1043 aaKnown RBP15.91■□□□□ 0.14
CACNB3-212ENST00000549971 ZNF790Q6PG37 636 aa15.91■□□□□ 0.14
CACNB3-212ENST00000549971 RWDD1Q9H446 243 aaPredicted RBP15.91■□□□□ 0.14
CACNB3-212ENST00000549971 VIRMAQ69YN4 1812 aaKnown RBP15.91■□□□□ 0.14
CACNB3-212ENST00000549971 CCT4P50991 539 aaKnown RBP15.9■□□□□ 0.14
CACNB3-212ENST00000549971 TNS2Q63HR2 1409 aa15.89■□□□□ 0.13
CACNB3-212ENST00000549971 GIGYF1O75420 1035 aaPredicted RBP15.89■□□□□ 0.13
CACNB3-212ENST00000549971 BARGINQ6ZT62 677 aa15.89■□□□□ 0.13
CACNB3-212ENST00000549971 FMNL2Q96PY5 1086 aa15.89■□□□□ 0.13
CACNB3-212ENST00000549971 ZBTB40Q9NUA8 1239 aa15.89■□□□□ 0.13
CACNB3-212ENST00000549971 DBF4Q9UBU7 674 aaPredicted RBP15.89■□□□□ 0.13
CACNB3-212ENST00000549971 SPATA31A1Q5TZJ5 1347 aa15.89■□□□□ 0.13
CACNB3-212ENST00000549971 WNK3Q9BYP7 1800 aa15.89■□□□□ 0.13
CACNB3-212ENST00000549971 RGS12O14924 1447 aa15.88■□□□□ 0.13
CACNB3-212ENST00000549971 ADAMTS2O95450 1211 aa15.88■□□□□ 0.13
CACNB3-212ENST00000549971 FLIIQ13045 1269 aa15.88■□□□□ 0.13
CACNB3-212ENST00000549971 ERBB4Q15303 1308 aa15.88■□□□□ 0.13
CACNB3-212ENST00000549971 EXOC5O00471 708 aa15.87■□□□□ 0.13
CACNB3-212ENST00000549971 HDAC1Q13547 482 aaPredicted RBP15.87■□□□□ 0.13
CACNB3-212ENST00000549971 NFATC2IPQ8NCF5 419 aa15.87■□□□□ 0.13
CACNB3-212ENST00000549971 TNNQ9UQP3 1299 aa15.87■□□□□ 0.13
CACNB3-212ENST00000549971 SHANK3Q9BYB0 1731 aa15.87■□□□□ 0.13
CACNB3-212ENST00000549971 SPATA31A5Q5VU36 1347 aa15.87■□□□□ 0.13
CACNB3-212ENST00000549971 SPATA31A7Q8IWB4 1347 aa15.87■□□□□ 0.13
CACNB3-212ENST00000549971 NUTM2BA6NNL0 878 aaPredicted RBP15.86■□□□□ 0.13
CACNB3-212ENST00000549971 NUTM2EB1AL46 878 aaPredicted RBP15.86■□□□□ 0.13
CACNB3-212ENST00000549971 ZBTB7BO15156 539 aaPredicted RBP15.86■□□□□ 0.13
CACNB3-212ENST00000549971 SNRPA1P09661 255 aaKnown RBP15.86■□□□□ 0.13
CACNB3-212ENST00000549971 UNC5CLQ8IV45 518 aa15.86■□□□□ 0.13
CACNB3-212ENST00000549971 NUTM2AQ8IVF1 878 aaPredicted RBP15.86■□□□□ 0.13
CACNB3-212ENST00000549971 HYPKQ9NX55 129 aa15.86■□□□□ 0.13
CACNB3-212ENST00000549971 TCERG1O14776 1098 aaKnown RBP15.85■□□□□ 0.13
CACNB3-212ENST00000549971 FKBP5Q13451 457 aaPredicted RBP15.85■□□□□ 0.13
CACNB3-212ENST00000549971 PAPPAQ13219 1627 aa15.84■□□□□ 0.13
CACNB3-212ENST00000549971 VPS72Q15906 364 aa15.84■□□□□ 0.13
CACNB3-212ENST00000549971 FNBP4Q8N3X1 1017 aaPredicted RBP15.84■□□□□ 0.13
CACNB3-212ENST00000549971 DDX54Q8TDD1 881 aaKnown RBP15.84■□□□□ 0.13
CACNB3-212ENST00000549971 USP35Q9P2H5 1018 aa15.84■□□□□ 0.13
CACNB3-212ENST00000549971 IBTKQ9P2D0 1353 aaPredicted RBP15.84■□□□□ 0.13
CACNB3-212ENST00000549971 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.83■□□□□ 0.13
CACNB3-212ENST00000549971 KCNQ3O43525 872 aa15.83■□□□□ 0.12
CACNB3-212ENST00000549971 DDX58O95786 925 aaKnown RBP15.83■□□□□ 0.12
CACNB3-212ENST00000549971 DDX21Q9NR30 783 aaKnown RBP eCLIP15.83■□□□□ 0.12
CACNB3-212ENST00000549971 TMOD3Q9NYL9 352 aa15.83■□□□□ 0.12
CACNB3-212ENST00000549971 N4BP2Q86UW6 1770 aaPredicted RBP15.82■□□□□ 0.12
CACNB3-212ENST00000549971 EIF2S2P20042 333 aaKnown RBP15.82■□□□□ 0.12
CACNB3-212ENST00000549971 HSPA1LP34931 641 aa15.82■□□□□ 0.12
CACNB3-212ENST00000549971 VSIG10Q8N0Z9 540 aa15.82■□□□□ 0.12
CACNB3-212ENST00000549971 NGLY1Q96IV0 654 aa15.82■□□□□ 0.12
CACNB3-212ENST00000549971 TEX13AQ9BXU3 409 aaPredicted RBP15.82■□□□□ 0.12
CACNB3-212ENST00000549971 HDAC5Q9UQL6 1122 aa15.82■□□□□ 0.12
CACNB3-212ENST00000549971 PCDHB15Q9Y5E8 787 aa15.82■□□□□ 0.12
CACNB3-212ENST00000549971 ATP10DQ9P241 1426 aa15.82■□□□□ 0.12
CACNB3-212ENST00000549971 GNAI3P08754 354 aa15.81■□□□□ 0.12
CACNB3-212ENST00000549971 DDB1Q16531 1140 aa15.81■□□□□ 0.12
CACNB3-212ENST00000549971 ZNF496Q96IT1 587 aaPredicted RBP15.81■□□□□ 0.12
CACNB3-212ENST00000549971 CHPF2Q9P2E5 772 aa15.81■□□□□ 0.12
CACNB3-212ENST00000549971 LAMB4A4D0S4 1761 aa15.8■□□□□ 0.12
CACNB3-212ENST00000549971 UBR2Q8IWV8 1755 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms