RNA–Protein interactions for RNA: ENST00000549872.5

CHPT1-205, Transcript of choline phosphotransferase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHPT1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-205ENST00000549872 AAMPQ13685 434 aa33.92■■■■□ 3.02
CHPT1-205ENST00000549872 DDX19BQ9UMR2 479 aa33.91■■■■□ 3.02
CHPT1-205ENST00000549872 SLC4A2P04920 1241 aa33.91■■■■□ 3.02
CHPT1-205ENST00000549872 EIF4A1P60842 406 aaKnown RBP33.91■■■■□ 3.02
CHPT1-205ENST00000549872 CENPQQ7L2Z9 268 aaPredicted RBP33.89■■■■□ 3.02
CHPT1-205ENST00000549872 API5Q9BZZ5 524 aaKnown RBP33.89■■■■□ 3.02
CHPT1-205ENST00000549872 IL2RBP14784 551 aa33.88■■■■□ 3.01
CHPT1-205ENST00000549872 NECTIN2Q92692 538 aa33.88■■■■□ 3.01
CHPT1-205ENST00000549872 USP35Q9P2H5 1018 aa33.88■■■■□ 3.01
CHPT1-205ENST00000549872 ABCC4O15439 1325 aa33.88■■■■□ 3.01
CHPT1-205ENST00000549872 SOS1Q07889 1333 aaPredicted RBP33.88■■■■□ 3.01
CHPT1-205ENST00000549872 PCDHB15Q9Y5E8 787 aa33.87■■■■□ 3.01
CHPT1-205ENST00000549872 ZCRB1Q8TBF4 217 aaKnown RBP33.87■■■■□ 3.01
CHPT1-205ENST00000549872 IGHDP01880 384 aa33.86■■■■□ 3.01
CHPT1-205ENST00000549872 ADAMTS2O95450 1211 aa33.86■■■■□ 3.01
CHPT1-205ENST00000549872 CCDC30Q5VVM6 783 aa33.86■■■■□ 3.01
CHPT1-205ENST00000549872 TSHZ2Q9NRE2 1034 aa33.86■■■■□ 3.01
CHPT1-205ENST00000549872 DCAF5Q96JK2 942 aa33.85■■■■□ 3.01
CHPT1-205ENST00000549872 STK31Q9BXU1 1019 aa33.84■■■■□ 3.01
CHPT1-205ENST00000549872 SLC52A2Q9HAB3 445 aa33.84■■■■□ 3.01
CHPT1-205ENST00000549872 G2E3Q7L622 706 aa33.84■■■■□ 3.01
CHPT1-205ENST00000549872 RGS12O14924 1447 aa33.84■■■■□ 3.01
CHPT1-205ENST00000549872 NFATC2IPQ8NCF5 419 aa33.82■■■■□ 3.01
CHPT1-205ENST00000549872 PTPRCP08575 1304 aa33.82■■■■□ 3
CHPT1-205ENST00000549872 PCDH11XQ9BZA7 1347 aa33.82■■■■□ 3
CHPT1-205ENST00000549872 PCDH11YQ9BZA8 1340 aa33.82■■■■□ 3
CHPT1-205ENST00000549872 NUTM2BA6NNL0 878 aaPredicted RBP33.82■■■■□ 3
CHPT1-205ENST00000549872 NUTM2EB1AL46 878 aaPredicted RBP33.82■■■■□ 3
CHPT1-205ENST00000549872 HSP90AB1P08238 724 aaKnown RBP33.82■■■■□ 3
CHPT1-205ENST00000549872 NUTM2AQ8IVF1 878 aaPredicted RBP33.82■■■■□ 3
CHPT1-205ENST00000549872 PLCH1Q4KWH8 1693 aa33.81■■■■□ 3
CHPT1-205ENST00000549872 SHANK3Q9BYB0 1731 aa33.81■■■■□ 3
CHPT1-205ENST00000549872 HDGFL1Q5TGJ6 251 aa33.8■■■■□ 3
CHPT1-205ENST00000549872 ZBTB40Q9NUA8 1239 aa33.8■■■■□ 3
CHPT1-205ENST00000549872 SKAP1Q86WV1 359 aa33.79■■■■□ 3
CHPT1-205ENST00000549872 MRC1P22897 1456 aa33.78■■■■□ 3
CHPT1-205ENST00000549872 CACNA1FO60840 1977 aa33.77■■■■□ 3
CHPT1-205ENST00000549872 HOXB7P09629 217 aa33.77■■■■□ 3
CHPT1-205ENST00000549872 EIF2S2P20042 333 aaKnown RBP33.77■■■■□ 3
CHPT1-205ENST00000549872 SLC39A6Q13433 755 aa33.77■■■■□ 3
CHPT1-205ENST00000549872 ZBTB7BO15156 539 aaPredicted RBP33.76■■■■□ 3
CHPT1-205ENST00000549872 DDX54Q8TDD1 881 aaKnown RBP33.76■■■■□ 3
CHPT1-205ENST00000549872 HEG1Q9ULI3 1381 aa33.75■■■□□ 2.99
CHPT1-205ENST00000549872 ZNF790Q6PG37 636 aa33.74■■■□□ 2.99
CHPT1-205ENST00000549872 CERKQ8TCT0 537 aa33.74■■■□□ 2.99
CHPT1-205ENST00000549872 GIGYF1O75420 1035 aaPredicted RBP33.73■■■□□ 2.99
CHPT1-205ENST00000549872 CABP4P57796 275 aa33.73■■■□□ 2.99
CHPT1-205ENST00000549872 FLIIQ13045 1269 aa33.73■■■□□ 2.99
CHPT1-205ENST00000549872 INTS3Q68E01 1043 aaKnown RBP33.73■■■□□ 2.99
CHPT1-205ENST00000549872 NRAPQ86VF7 1730 aa33.71■■■□□ 2.99
CHPT1-205ENST00000549872 PRAMEF22A3QJZ6 481 aa33.7■■■□□ 2.99
CHPT1-205ENST00000549872 F6X3S4 739 aa33.7■■■□□ 2.99
CHPT1-205ENST00000549872 RWDD1Q9H446 243 aaPredicted RBP33.7■■■□□ 2.99
CHPT1-205ENST00000549872 NKX1-1Q15270 411 aaPredicted RBP33.7■■■□□ 2.99
CHPT1-205ENST00000549872 CHMP4BQ9H444 224 aaKnown RBP33.69■■■□□ 2.98
CHPT1-205ENST00000549872 CHPF2Q9P2E5 772 aa33.69■■■□□ 2.98
CHPT1-205ENST00000549872 DISP2A7MBM2 1401 aa33.69■■■□□ 2.98
CHPT1-205ENST00000549872 FKBP5Q13451 457 aaPredicted RBP33.69■■■□□ 2.98
CHPT1-205ENST00000549872 CHMP4AQ9BY43 222 aa33.67■■■□□ 2.98
CHPT1-205ENST00000549872 PHAXQ9H814 394 aaKnown RBP33.67■■■□□ 2.98
CHPT1-205ENST00000549872 SLC4A10Q6U841 1118 aa33.66■■■□□ 2.98
CHPT1-205ENST00000549872 C1orf115Q9H7X2 142 aa33.66■■■□□ 2.98
CHPT1-205ENST00000549872 C5P01031 1676 aa33.64■■■□□ 2.98
CHPT1-205ENST00000549872 WNK3Q9BYP7 1800 aa33.64■■■□□ 2.98
CHPT1-205ENST00000549872 ERVV-2B6SEH9 535 aa33.64■■■□□ 2.98
CHPT1-205ENST00000549872 TTC5Q8N0Z6 440 aa33.64■■■□□ 2.98
CHPT1-205ENST00000549872 ZNF496Q96IT1 587 aaPredicted RBP33.64■■■□□ 2.98
CHPT1-205ENST00000549872 JCADQ9P266 1359 aa33.64■■■□□ 2.98
CHPT1-205ENST00000549872 ANXA1P04083 346 aa33.63■■■□□ 2.97
CHPT1-205ENST00000549872 HDAC1Q13547 482 aaPredicted RBP33.63■■■□□ 2.97
CHPT1-205ENST00000549872 NWD2Q9ULI1 1742 aa33.62■■■□□ 2.97
CHPT1-205ENST00000549872 DBF4Q9UBU7 674 aaPredicted RBP33.61■■■□□ 2.97
CHPT1-205ENST00000549872 TOGARAM1Q9Y4F4 1720 aa33.61■■■□□ 2.97
CHPT1-205ENST00000549872 SPATA31A1Q5TZJ5 1347 aa33.6■■■□□ 2.97
CHPT1-205ENST00000549872 SLIT2O94813 1529 aa33.6■■■□□ 2.97
CHPT1-205ENST00000549872 CCT4P50991 539 aaKnown RBP33.6■■■□□ 2.97
CHPT1-205ENST00000549872 PROSER3Q2NL68 480 aa33.58■■■□□ 2.97
CHPT1-205ENST00000549872 FMNL2Q96PY5 1086 aa33.57■■■□□ 2.96
CHPT1-205ENST00000549872 EXOC5O00471 708 aa33.55■■■□□ 2.96
CHPT1-205ENST00000549872 RGS3P49796 1198 aa33.55■■■□□ 2.96
CHPT1-205ENST00000549872 MEIS3Q99687 375 aa33.55■■■□□ 2.96
CHPT1-205ENST00000549872 SNRPA1P09661 255 aaKnown RBP33.55■■■□□ 2.96
CHPT1-205ENST00000549872 N4BP2Q86UW6 1770 aaPredicted RBP33.54■■■□□ 2.96
CHPT1-205ENST00000549872 SPATA31A5Q5VU36 1347 aa33.53■■■□□ 2.96
CHPT1-205ENST00000549872 SPATA31A7Q8IWB4 1347 aa33.53■■■□□ 2.96
CHPT1-205ENST00000549872 C8orf37Q96NL8 207 aa33.53■■■□□ 2.96
CHPT1-205ENST00000549872 PAPPAQ13219 1627 aa33.53■■■□□ 2.96
CHPT1-205ENST00000549872 GLI3P10071 1580 aa33.53■■■□□ 2.96
CHPT1-205ENST00000549872 THRAP3Q9Y2W1 955 aaKnown RBP33.53■■■□□ 2.96
CHPT1-205ENST00000549872 CCDC9Q9Y3X0 531 aaKnown RBP33.53■■■□□ 2.96
CHPT1-205ENST00000549872 UBR2Q8IWV8 1755 aa33.52■■■□□ 2.96
CHPT1-205ENST00000549872 PDZRN3Q9UPQ7 1066 aa33.52■■■□□ 2.96
CHPT1-205ENST00000549872 PXDNLA1KZ92 1463 aa33.52■■■□□ 2.96
CHPT1-205ENST00000549872 SIRT2Q8IXJ6 389 aa33.52■■■□□ 2.96
CHPT1-205ENST00000549872 USP16Q9Y5T5 823 aa33.52■■■□□ 2.96
CHPT1-205ENST00000549872 PDIA6Q15084 440 aa33.51■■■□□ 2.95
CHPT1-205ENST00000549872 NGLY1Q96IV0 654 aa33.51■■■□□ 2.95
CHPT1-205ENST00000549872 DDX21Q9NR30 783 aaKnown RBP eCLIP33.51■■■□□ 2.95
CHPT1-205ENST00000549872 TNS2Q63HR2 1409 aa33.5■■■□□ 2.95
CHPT1-205ENST00000549872 TMOD3Q9NYL9 352 aa33.5■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms