RNA–Protein interactions for RNA: ENST00000549784.5

CALCOCO1-216, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-216ENST00000549784 TMOD3Q9NYL9 352 aa13.36□□□□□ -0.27
CALCOCO1-216ENST00000549784 EIF4A2Q14240 407 aaKnown RBP13.35□□□□□ -0.27
CALCOCO1-216ENST00000549784 MMP10P09238 476 aa13.34□□□□□ -0.27
CALCOCO1-216ENST00000549784 ZEB1P37275 1124 aaPredicted RBP13.34□□□□□ -0.27
CALCOCO1-216ENST00000549784 TNNT2P45379 298 aaPredicted RBP13.34□□□□□ -0.27
CALCOCO1-216ENST00000549784 IFFO2Q5TF58 517 aa13.34□□□□□ -0.27
CALCOCO1-216ENST00000549784 IFNL2Q8IZJ0 200 aa13.34□□□□□ -0.27
CALCOCO1-216ENST00000549784 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.34□□□□□ -0.27
CALCOCO1-216ENST00000549784 KIF3CO14782 793 aa13.33□□□□□ -0.28
CALCOCO1-216ENST00000549784 ANKRD26Q9UPS8 1709 aa13.33□□□□□ -0.28
CALCOCO1-216ENST00000549784 KDRP35968 1356 aa13.32□□□□□ -0.28
CALCOCO1-216ENST00000549784 HSPA6P17066 643 aa13.32□□□□□ -0.28
CALCOCO1-216ENST00000549784 HMGB2P26583 209 aaKnown RBP13.32□□□□□ -0.28
CALCOCO1-216ENST00000549784 PXDNLA1KZ92 1463 aa13.31□□□□□ -0.28
CALCOCO1-216ENST00000549784 A0A0G2JLW4 131 aa13.31□□□□□ -0.28
CALCOCO1-216ENST00000549784 ARHGEF1Q92888 912 aaKnown RBP13.31□□□□□ -0.28
CALCOCO1-216ENST00000549784 POLR3GLQ9BT43 218 aa13.3□□□□□ -0.28
CALCOCO1-216ENST00000549784 RBM42Q9BTD8 480 aaKnown RBP13.3□□□□□ -0.28
CALCOCO1-216ENST00000549784 TRAPPC3LQ5T215 181 aa13.29□□□□□ -0.28
CALCOCO1-216ENST00000549784 KIAA1551Q9HCM1 1747 aa13.29□□□□□ -0.28
CALCOCO1-216ENST00000549784 KDM6AO15550 1401 aaPredicted RBP13.29□□□□□ -0.28
CALCOCO1-216ENST00000549784 CICQ96RK0 1608 aaPredicted RBP13.28□□□□□ -0.28
CALCOCO1-216ENST00000549784 CEP350Q5VT06 3117 aa13.28□□□□□ -0.28
CALCOCO1-216ENST00000549784 GYS1P13807 737 aa13.28□□□□□ -0.28
CALCOCO1-216ENST00000549784 DPEP1P16444 411 aa13.28□□□□□ -0.28
CALCOCO1-216ENST00000549784 BCS1LQ9Y276 419 aa13.28□□□□□ -0.28
CALCOCO1-216ENST00000549784 RTCBQ9Y3I0 505 aaKnown RBP13.28□□□□□ -0.28
CALCOCO1-216ENST00000549784 ERVV-2B6SEH9 535 aa13.27□□□□□ -0.29
CALCOCO1-216ENST00000549784 KCNA3P22001 575 aa13.27□□□□□ -0.29
CALCOCO1-216ENST00000549784 TGFB2P61812 414 aa13.27□□□□□ -0.29
CALCOCO1-216ENST00000549784 AEBP1Q8IUX7 1158 aa13.27□□□□□ -0.29
CALCOCO1-216ENST00000549784 NLGN1Q8N2Q7 840 aa13.27□□□□□ -0.29
CALCOCO1-216ENST00000549784 C10orf71Q711Q0 1435 aa13.27□□□□□ -0.29
CALCOCO1-216ENST00000549784 RPS6KA4O75676 772 aa13.26□□□□□ -0.29
CALCOCO1-216ENST00000549784 RC3H1Q5TC82 1133 aaKnown RBP13.26□□□□□ -0.29
CALCOCO1-216ENST00000549784 DCAF5Q96JK2 942 aa13.26□□□□□ -0.29
CALCOCO1-216ENST00000549784 SRP68Q9UHB9 627 aaKnown RBP13.26□□□□□ -0.29
CALCOCO1-216ENST00000549784 CNTNAP4Q9C0A0 1308 aa13.25□□□□□ -0.29
CALCOCO1-216ENST00000549784 PTCD1O75127 700 aaKnown RBP13.25□□□□□ -0.29
CALCOCO1-216ENST00000549784 ZNF530Q6P9A1 599 aaPredicted RBP13.25□□□□□ -0.29
CALCOCO1-216ENST00000549784 ARHGAP27Q6ZUM4 889 aa13.25□□□□□ -0.29
CALCOCO1-216ENST00000549784 PANK3Q9H999 370 aa13.25□□□□□ -0.29
CALCOCO1-216ENST00000549784 NMRK2Q9NPI5 230 aa13.25□□□□□ -0.29
CALCOCO1-216ENST00000549784 N4BP2Q86UW6 1770 aaPredicted RBP13.25□□□□□ -0.29
CALCOCO1-216ENST00000549784 RFC4P35249 363 aa13.24□□□□□ -0.29
CALCOCO1-216ENST00000549784 CABP4P57796 275 aa13.24□□□□□ -0.29
CALCOCO1-216ENST00000549784 PLEKHO1Q53GL0 409 aaPredicted RBP13.24□□□□□ -0.29
CALCOCO1-216ENST00000549784 KIF13BQ9NQT8 1826 aa13.23□□□□□ -0.29
CALCOCO1-216ENST00000549784 FCHSD2O94868 740 aa13.23□□□□□ -0.29
CALCOCO1-216ENST00000549784 ADRA2BP18089 450 aa13.23□□□□□ -0.29
CALCOCO1-216ENST00000549784 DDR1Q08345 913 aa13.23□□□□□ -0.29
CALCOCO1-216ENST00000549784 FKBP8Q14318 412 aa13.23□□□□□ -0.29
CALCOCO1-216ENST00000549784 NFATC2IPQ8NCF5 419 aa13.23□□□□□ -0.29
CALCOCO1-216ENST00000549784 C4AP0C0L4 1744 aa13.22□□□□□ -0.29
CALCOCO1-216ENST00000549784 HSP90AB1P08238 724 aaKnown RBP13.22□□□□□ -0.29
CALCOCO1-216ENST00000549784 CRKLP46109 303 aaKnown RBP13.22□□□□□ -0.29
CALCOCO1-216ENST00000549784 MTHFSP49914 203 aa13.22□□□□□ -0.29
CALCOCO1-216ENST00000549784 DNAJC5GQ8N7S2 189 aa13.22□□□□□ -0.29
CALCOCO1-216ENST00000549784 CCDC87Q9NVE4 849 aa13.22□□□□□ -0.29
CALCOCO1-216ENST00000549784 PARP3Q9Y6F1 533 aa13.22□□□□□ -0.29
CALCOCO1-216ENST00000549784 COL5A3P25940 1745 aaPredicted RBP13.22□□□□□ -0.29
CALCOCO1-216ENST00000549784 PLEKHG2Q9H7P9 1386 aa13.21□□□□□ -0.29
CALCOCO1-216ENST00000549784 KIF7Q2M1P5 1343 aa13.21□□□□□ -0.29
CALCOCO1-216ENST00000549784 AMOTQ4VCS5 1084 aa13.21□□□□□ -0.29
CALCOCO1-216ENST00000549784 C9orf131Q5VYM1 1079 aa13.21□□□□□ -0.29
CALCOCO1-216ENST00000549784 INTS5Q6P9B9 1019 aaKnown RBP13.21□□□□□ -0.29
CALCOCO1-216ENST00000549784 ZNF831Q5JPB2 1677 aa13.21□□□□□ -0.3
CALCOCO1-216ENST00000549784 USP42Q9H9J4 1324 aaKnown RBP13.2□□□□□ -0.3
CALCOCO1-216ENST00000549784 MYH14Q7Z406 1995 aaKnown RBP13.2□□□□□ -0.3
CALCOCO1-216ENST00000549784 TOMM70O94826 608 aa13.2□□□□□ -0.3
CALCOCO1-216ENST00000549784 CHRNA5P30532 468 aa13.2□□□□□ -0.3
CALCOCO1-216ENST00000549784 HTRA3P83110 453 aa13.2□□□□□ -0.3
CALCOCO1-216ENST00000549784 SULT6B1Q6IMI4 303 aa13.2□□□□□ -0.3
CALCOCO1-216ENST00000549784 IL13P35225 146 aa13.19□□□□□ -0.3
CALCOCO1-216ENST00000549784 MORC1Q86VD1 984 aa13.19□□□□□ -0.3
CALCOCO1-216ENST00000549784 LGR6Q9HBX8 967 aa13.19□□□□□ -0.3
CALCOCO1-216ENST00000549784 POLRMTO00411 1230 aaKnown RBP13.18□□□□□ -0.3
CALCOCO1-216ENST00000549784 TM4SF1P30408 202 aa13.18□□□□□ -0.3
CALCOCO1-216ENST00000549784 APLP1P51693 650 aa13.18□□□□□ -0.3
CALCOCO1-216ENST00000549784 C1orf141Q5JVX7 400 aa13.18□□□□□ -0.3
CALCOCO1-216ENST00000549784 DNAJC10Q8IXB1 793 aa13.18□□□□□ -0.3
CALCOCO1-216ENST00000549784 PIM2Q9P1W9 311 aa13.18□□□□□ -0.3
CALCOCO1-216ENST00000549784 USPL1Q5W0Q7 1092 aa13.17□□□□□ -0.3
CALCOCO1-216ENST00000549784 ADAMTS7Q9UKP4 1686 aa13.17□□□□□ -0.3
CALCOCO1-216ENST00000549784 TJP1Q07157 1748 aa13.16□□□□□ -0.3
CALCOCO1-216ENST00000549784 PRELPP51888 382 aa13.16□□□□□ -0.3
CALCOCO1-216ENST00000549784 SLC39A6Q13433 755 aa13.16□□□□□ -0.3
CALCOCO1-216ENST00000549784 DALRD3Q5D0E6 543 aaKnown RBP13.16□□□□□ -0.3
CALCOCO1-216ENST00000549784 KNSTRNQ9Y448 316 aa13.16□□□□□ -0.3
CALCOCO1-216ENST00000549784 BRCA1P38398 1863 aaKnown RBP13.16□□□□□ -0.3
CALCOCO1-216ENST00000549784 KCPQ6ZWJ8 1503 aa13.15□□□□□ -0.3
CALCOCO1-216ENST00000549784 BCL2L12Q9HB09 334 aa13.15□□□□□ -0.3
CALCOCO1-216ENST00000549784 RRAGCQ9HB90 399 aa13.15□□□□□ -0.3
CALCOCO1-216ENST00000549784 RNF181Q9P0P0 153 aa13.15□□□□□ -0.3
CALCOCO1-216ENST00000549784 SOS1Q07889 1333 aaPredicted RBP13.14□□□□□ -0.31
CALCOCO1-216ENST00000549784 CYP19A1P11511 503 aaPredicted RBP13.14□□□□□ -0.31
CALCOCO1-216ENST00000549784 NFIXQ14938 502 aa13.14□□□□□ -0.31
CALCOCO1-216ENST00000549784 RBM46Q8TBY0 533 aaKnown RBP13.14□□□□□ -0.31
CALCOCO1-216ENST00000549784 SLC52A2Q9HAB3 445 aa13.14□□□□□ -0.31
CALCOCO1-216ENST00000549784 RNMTO43148 476 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms