RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 CPDO75976 1380 aa9.47□□□□□ -0.89
TMEM116-208ENST00000549537 CPSF1Q10570 1443 aaKnown RBP9.47□□□□□ -0.89
TMEM116-208ENST00000549537 MON2Q7Z3U7 1717 aa9.46□□□□□ -0.89
TMEM116-208ENST00000549537 SEPT12Q8IYM1 358 aa9.46□□□□□ -0.9
TMEM116-208ENST00000549537 ABTB2Q8N961 1025 aa9.46□□□□□ -0.9
TMEM116-208ENST00000549537 ZBED2Q9BTP6 218 aa9.46□□□□□ -0.9
TMEM116-208ENST00000549537 CARD11Q9BXL7 1154 aa9.46□□□□□ -0.9
TMEM116-208ENST00000549537 PRDM11Q9NQV5 511 aa9.46□□□□□ -0.9
TMEM116-208ENST00000549537 SPATA31A5Q5VU36 1347 aa9.46□□□□□ -0.9
TMEM116-208ENST00000549537 SPATA31A7Q8IWB4 1347 aa9.46□□□□□ -0.9
TMEM116-208ENST00000549537 CD163L1Q9NR16 1453 aa9.46□□□□□ -0.9
TMEM116-208ENST00000549537 CAMTA1Q9Y6Y1 1673 aa9.45□□□□□ -0.9
TMEM116-208ENST00000549537 CHRNA2Q15822 529 aa9.45□□□□□ -0.9
TMEM116-208ENST00000549537 EVI5O60447 810 aa9.44□□□□□ -0.9
TMEM116-208ENST00000549537 GCP02774 474 aa9.44□□□□□ -0.9
TMEM116-208ENST00000549537 ZC3H6P61129 1189 aaKnown RBP9.44□□□□□ -0.9
TMEM116-208ENST00000549537 NLRP13Q86W25 1043 aa9.44□□□□□ -0.9
TMEM116-208ENST00000549537 CCDC9Q9Y3X0 531 aaKnown RBP9.44□□□□□ -0.9
TMEM116-208ENST00000549537 USP54Q70EL1 1684 aa9.44□□□□□ -0.9
TMEM116-208ENST00000549537 COL18A1P39060 1754 aa9.44□□□□□ -0.9
TMEM116-208ENST00000549537 SPATA31A1Q5TZJ5 1347 aa9.43□□□□□ -0.9
TMEM116-208ENST00000549537 TTC21BQ7Z4L5 1316 aa9.43□□□□□ -0.9
TMEM116-208ENST00000549537 FAM98CQ17RN3 349 aaKnown RBP9.43□□□□□ -0.9
TMEM116-208ENST00000549537 TMEM132AQ24JP5 1023 aa9.43□□□□□ -0.9
TMEM116-208ENST00000549537 CCDC125Q86Z20 511 aa9.43□□□□□ -0.9
TMEM116-208ENST00000549537 TESK2Q96S53 571 aa9.43□□□□□ -0.9
TMEM116-208ENST00000549537 NFAT5O94916 1531 aa9.42□□□□□ -0.9
TMEM116-208ENST00000549537 COL5A2P05997 1499 aaPredicted RBP9.42□□□□□ -0.9
TMEM116-208ENST00000549537 BLMP54132 1417 aaPredicted RBP9.42□□□□□ -0.9
TMEM116-208ENST00000549537 MAP3K9P80192 1104 aa9.42□□□□□ -0.9
TMEM116-208ENST00000549537 KRT27Q7Z3Y8 459 aa9.42□□□□□ -0.9
TMEM116-208ENST00000549537 DDX27Q96GQ7 796 aaKnown RBP9.42□□□□□ -0.9
TMEM116-208ENST00000549537 AATKQ6ZMQ8 1374 aa9.41□□□□□ -0.9
TMEM116-208ENST00000549537 TTC21AQ8NDW8 1320 aa9.41□□□□□ -0.9
TMEM116-208ENST00000549537 PUS7Q96PZ0 661 aaKnown RBP9.41□□□□□ -0.9
TMEM116-208ENST00000549537 IRX2Q9BZI1 471 aaPredicted RBP9.41□□□□□ -0.9
TMEM116-208ENST00000549537 USP31Q70CQ4 1352 aa9.4□□□□□ -0.9
TMEM116-208ENST00000549537 KTN1Q86UP2 1357 aaKnown RBP9.4□□□□□ -0.9
TMEM116-208ENST00000549537 ST20-MTHFSA0A0A6YYL1 179 aa9.4□□□□□ -0.9
TMEM116-208ENST00000549537 A0A0G2JS52 829 aa9.4□□□□□ -0.9
TMEM116-208ENST00000549537 LARP1Q6PKG0 1096 aaKnown RBP9.4□□□□□ -0.9
TMEM116-208ENST00000549537 STRN4Q9NRL3 753 aa9.4□□□□□ -0.9
TMEM116-208ENST00000549537 CLSPNQ9HAW4 1339 aa9.39□□□□□ -0.91
TMEM116-208ENST00000549537 BARGINQ6ZT62 677 aa9.39□□□□□ -0.91
TMEM116-208ENST00000549537 LARP6Q9BRS8 491 aaKnown RBP9.39□□□□□ -0.91
TMEM116-208ENST00000549537 ADAM33Q9BZ11 813 aa9.39□□□□□ -0.91
TMEM116-208ENST00000549537 SLC12A5Q9H2X9 1139 aa9.39□□□□□ -0.91
TMEM116-208ENST00000549537 ABCC6O95255 1503 aa9.39□□□□□ -0.91
TMEM116-208ENST00000549537 TNS1Q9HBL0 1735 aaKnown RBP9.39□□□□□ -0.91
TMEM116-208ENST00000549537 PARP4Q9UKK3 1724 aaKnown RBP9.39□□□□□ -0.91
TMEM116-208ENST00000549537 A0A1W2PP64 1363 aa9.38□□□□□ -0.91
TMEM116-208ENST00000549537 RGPD5Q99666 1765 aa9.38□□□□□ -0.91
TMEM116-208ENST00000549537 UTRNP46939 3433 aa9.38□□□□□ -0.91
TMEM116-208ENST00000549537 PPP1R3GB7ZBB8 358 aa9.38□□□□□ -0.91
TMEM116-208ENST00000549537 ARHGEF25Q86VW2 580 aa9.38□□□□□ -0.91
TMEM116-208ENST00000549537 RABGEF1Q9UJ41 708 aa9.38□□□□□ -0.91
TMEM116-208ENST00000549537 RGPD1P0DJD0 1748 aa9.38□□□□□ -0.91
TMEM116-208ENST00000549537 CRB1P82279 1406 aa9.38□□□□□ -0.91
TMEM116-208ENST00000549537 EDC4Q6P2E9 1401 aaKnown RBP9.38□□□□□ -0.91
TMEM116-208ENST00000549537 WNK3Q9BYP7 1800 aa9.38□□□□□ -0.91
TMEM116-208ENST00000549537 USP47Q96K76 1375 aa9.37□□□□□ -0.91
TMEM116-208ENST00000549537 EVA1CP58658 441 aa9.37□□□□□ -0.91
TMEM116-208ENST00000549537 MYT1Q01538 1121 aa9.37□□□□□ -0.91
TMEM116-208ENST00000549537 FAM182BQ5T319 152 aa9.37□□□□□ -0.91
TMEM116-208ENST00000549537 DEFB132Q7Z7B7 95 aa9.37□□□□□ -0.91
TMEM116-208ENST00000549537 TCP11L2Q8N4U5 519 aa9.37□□□□□ -0.91
TMEM116-208ENST00000549537 KCNH5Q8NCM2 988 aa9.37□□□□□ -0.91
TMEM116-208ENST00000549537 ANKK1Q8NFD2 765 aa9.37□□□□□ -0.91
TMEM116-208ENST00000549537 FBXW7Q969H0 707 aa9.37□□□□□ -0.91
TMEM116-208ENST00000549537 OVOS2A0A0J9YW53 1432 aa9.37□□□□□ -0.91
TMEM116-208ENST00000549537 DISP2A7MBM2 1401 aa9.37□□□□□ -0.91
TMEM116-208ENST00000549537 OVOS2Q6IE36 1432 aa9.37□□□□□ -0.91
TMEM116-208ENST00000549537 NINLQ9Y2I6 1382 aa9.37□□□□□ -0.91
TMEM116-208ENST00000549537 LRRC37A3O60309 1634 aa9.36□□□□□ -0.91
TMEM116-208ENST00000549537 NYAP1Q6ZVC0 841 aa9.36□□□□□ -0.91
TMEM116-208ENST00000549537 NME9Q86XW9 330 aa9.36□□□□□ -0.91
TMEM116-208ENST00000549537 TMC1Q8TDI8 760 aa9.36□□□□□ -0.91
TMEM116-208ENST00000549537 PODXL2Q9NZ53 605 aa9.36□□□□□ -0.91
TMEM116-208ENST00000549537 USP35Q9P2H5 1018 aa9.36□□□□□ -0.91
TMEM116-208ENST00000549537 THRAP3Q9Y2W1 955 aaKnown RBP9.36□□□□□ -0.91
TMEM116-208ENST00000549537 PEAK1Q9H792 1746 aa9.36□□□□□ -0.91
TMEM116-208ENST00000549537 WDR17Q8IZU2 1322 aa9.35□□□□□ -0.91
TMEM116-208ENST00000549537 LTN1O94822 1766 aa9.35□□□□□ -0.91
TMEM116-208ENST00000549537 MFSD10Q14728 455 aa9.35□□□□□ -0.91
TMEM116-208ENST00000549537 HDGFL2Q7Z4V5 671 aaPredicted RBP9.35□□□□□ -0.91
TMEM116-208ENST00000549537 LAPTM4BQ86VI4 370 aa9.35□□□□□ -0.91
TMEM116-208ENST00000549537 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.35□□□□□ -0.91
TMEM116-208ENST00000549537 PCGF6Q9BYE7 350 aa9.35□□□□□ -0.91
TMEM116-208ENST00000549537 TERF2IPQ9NYB0 399 aa9.35□□□□□ -0.91
TMEM116-208ENST00000549537 MYOM1P52179 1685 aa9.34□□□□□ -0.91
TMEM116-208ENST00000549537 ZBTB7CA1YPR0 619 aa9.33□□□□□ -0.92
TMEM116-208ENST00000549537 FAM196AQ6ZSG2 479 aa9.33□□□□□ -0.92
TMEM116-208ENST00000549537 ANKRD36BQ8N2N9 1353 aa9.33□□□□□ -0.92
TMEM116-208ENST00000549537 PHF14O94880 888 aa9.32□□□□□ -0.92
TMEM116-208ENST00000549537 TMF1P82094 1093 aa9.32□□□□□ -0.92
TMEM116-208ENST00000549537 SF3B2Q13435 895 aaKnown RBP9.32□□□□□ -0.92
TMEM116-208ENST00000549537 TYW1BQ6NUM6 668 aa9.32□□□□□ -0.92
TMEM116-208ENST00000549537 TOM1L2Q6ZVM7 507 aa9.32□□□□□ -0.92
TMEM116-208ENST00000549537 PCDHGA10Q9Y5H3 936 aa9.32□□□□□ -0.92
TMEM116-208ENST00000549537 SBF2Q86WG5 1849 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms