RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 INSRP06213 1382 aa15.18■□□□□ 0.02
TRAFD1-206ENST00000549358 UBR3Q6ZT12 1888 aa15.17■□□□□ 0.02
TRAFD1-206ENST00000549358 PXDNLA1KZ92 1463 aa15.17■□□□□ 0.02
TRAFD1-206ENST00000549358 ST20-MTHFSA0A0A6YYL1 179 aa15.17■□□□□ 0.02
TRAFD1-206ENST00000549358 ASAP1Q9ULH1 1129 aa15.17■□□□□ 0.02
TRAFD1-206ENST00000549358 CICQ96RK0 1608 aaPredicted RBP15.17■□□□□ 0.02
TRAFD1-206ENST00000549358 NKX1-1Q15270 411 aaPredicted RBP15.16■□□□□ 0.02
TRAFD1-206ENST00000549358 C16orf71Q8IYS4 520 aaPredicted RBP15.16■□□□□ 0.02
TRAFD1-206ENST00000549358 KLRG1Q96E93 195 aa15.16■□□□□ 0.02
TRAFD1-206ENST00000549358 TMOD3Q9NYL9 352 aa15.16■□□□□ 0.02
TRAFD1-206ENST00000549358 SPG7Q9UQ90 795 aa15.16■□□□□ 0.02
TRAFD1-206ENST00000549358 FCHSD2O94868 740 aa15.15■□□□□ 0.02
TRAFD1-206ENST00000549358 DPEP1P16444 411 aa15.15■□□□□ 0.02
TRAFD1-206ENST00000549358 TRAPPC3LQ5T215 181 aa15.15■□□□□ 0.02
TRAFD1-206ENST00000549358 NLGN1Q8N2Q7 840 aa15.15■□□□□ 0.02
TRAFD1-206ENST00000549358 RBM46Q8TBY0 533 aaKnown RBP15.15■□□□□ 0.02
TRAFD1-206ENST00000549358 FLT4P35916 1363 aa15.14■□□□□ 0.01
TRAFD1-206ENST00000549358 TMF1P82094 1093 aa15.14■□□□□ 0.01
TRAFD1-206ENST00000549358 C9orf131Q5VYM1 1079 aa15.14■□□□□ 0.01
TRAFD1-206ENST00000549358 ITGB4P16144 1822 aa15.13■□□□□ 0.01
TRAFD1-206ENST00000549358 JMYQ8N9B5 988 aa15.13■□□□□ 0.01
TRAFD1-206ENST00000549358 RTCBQ9Y3I0 505 aaKnown RBP15.13■□□□□ 0.01
TRAFD1-206ENST00000549358 PPM1GO15355 546 aaPredicted RBP15.12■□□□□ 0.01
TRAFD1-206ENST00000549358 SLC24A1O60721 1099 aa15.12■□□□□ 0.01
TRAFD1-206ENST00000549358 FSTL1Q12841 308 aa15.12■□□□□ 0.01
TRAFD1-206ENST00000549358 TNS4Q8IZW8 715 aa15.12■□□□□ 0.01
TRAFD1-206ENST00000549358 ATG3Q9NT62 314 aa15.12■□□□□ 0.01
TRAFD1-206ENST00000549358 CCDC87Q9NVE4 849 aa15.12■□□□□ 0.01
TRAFD1-206ENST00000549358 WDR90Q96KV7 1748 aa15.12■□□□□ 0.01
TRAFD1-206ENST00000549358 N4BP2Q86UW6 1770 aaPredicted RBP15.11■□□□□ 0.01
TRAFD1-206ENST00000549358 MAP2P11137 1827 aaKnown RBP15.11■□□□□ 0.01
TRAFD1-206ENST00000549358 ARHGEF1Q92888 912 aaKnown RBP15.11■□□□□ 0.01
TRAFD1-206ENST00000549358 EMILIN1Q9Y6C2 1016 aa15.11■□□□□ 0.01
TRAFD1-206ENST00000549358 KIF24Q5T7B8 1368 aa15.11■□□□□ 0.01
TRAFD1-206ENST00000549358 C10orf71Q711Q0 1435 aa15.1■□□□□ 0.01
TRAFD1-206ENST00000549358 KIAA1551Q9HCM1 1747 aa15.1■□□□□ 0.01
TRAFD1-206ENST00000549358 KCNA3P22001 575 aa15.1■□□□□ 0.01
TRAFD1-206ENST00000549358 RRAGCQ9HB90 399 aa15.1■□□□□ 0.01
TRAFD1-206ENST00000549358 SPINK5Q9NQ38 1064 aaPredicted RBP15.1■□□□□ 0.01
TRAFD1-206ENST00000549358 PARP3Q9Y6F1 533 aa15.1■□□□□ 0.01
TRAFD1-206ENST00000549358 KDM2BQ8NHM5 1336 aa15.1■□□□□ 0.01
TRAFD1-206ENST00000549358 GYS1P13807 737 aa15.09■□□□□ 0.01
TRAFD1-206ENST00000549358 PHKG2P15735 406 aa15.09■□□□□ 0.01
TRAFD1-206ENST00000549358 RFC4P35249 363 aa15.09■□□□□ 0.01
TRAFD1-206ENST00000549358 IFNL2Q8IZJ0 200 aa15.09■□□□□ 0.01
TRAFD1-206ENST00000549358 PIM2Q9P1W9 311 aa15.09■□□□□ 0.01
TRAFD1-206ENST00000549358 TONSLQ96HA7 1378 aa15.09■□□□□ 0.01
TRAFD1-206ENST00000549358 PKD1L3Q7Z443 1732 aa15.09■□□□□ 0.01
TRAFD1-206ENST00000549358 PRELPP51888 382 aa15.08■□□□□ 0
TRAFD1-206ENST00000549358 SLC4A9Q96Q91 983 aa15.08■□□□□ 0
TRAFD1-206ENST00000549358 EYA1Q99502 592 aa15.08■□□□□ 0
TRAFD1-206ENST00000549358 RBM42Q9BTD8 480 aaKnown RBP15.08■□□□□ 0
TRAFD1-206ENST00000549358 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.08■□□□□ 04e-6■□□□□ 11.2
TRAFD1-206ENST00000549358 KIF13BQ9NQT8 1826 aa15.08■□□□□ 0
TRAFD1-206ENST00000549358 KCPQ6ZWJ8 1503 aa15.07■□□□□ 0
TRAFD1-206ENST00000549358 RNF181Q9P0P0 153 aa15.07■□□□□ 0
TRAFD1-206ENST00000549358 PLEKHG2Q9H7P9 1386 aa15.07■□□□□ 0
TRAFD1-206ENST00000549358 RPS6KA4O75676 772 aa15.06■□□□□ 0
TRAFD1-206ENST00000549358 DALRD3Q5D0E6 543 aaKnown RBP15.06■□□□□ 0
TRAFD1-206ENST00000549358 DCAF5Q96JK2 942 aa15.06■□□□□ 0
TRAFD1-206ENST00000549358 PCNTO95613 3336 aa15.05■□□□□ -0
TRAFD1-206ENST00000549358 RC3H1Q5TC82 1133 aaKnown RBP15.05■□□□□ -0
TRAFD1-206ENST00000549358 SMC1BQ8NDV3 1235 aa15.05■□□□□ -0
TRAFD1-206ENST00000549358 CARD14Q9BXL6 1004 aa15.05■□□□□ -0
TRAFD1-206ENST00000549358 NCAPD2Q15021 1401 aa15.05■□□□□ -0
TRAFD1-206ENST00000549358 C4AP0C0L4 1744 aa15.04■□□□□ -0
TRAFD1-206ENST00000549358 KDRP35968 1356 aa15.04■□□□□ -0
TRAFD1-206ENST00000549358 WASHC2AQ641Q2 1341 aa15.04■□□□□ -0
TRAFD1-206ENST00000549358 CNTNAP4Q9C0A0 1308 aa15.03■□□□□ -0
TRAFD1-206ENST00000549358 CHRNA5P30532 468 aa15.03■□□□□ -0
TRAFD1-206ENST00000549358 DSG3P32926 999 aa15.03■□□□□ -0
TRAFD1-206ENST00000549358 ERVV-2B6SEH9 535 aa15.02■□□□□ -0
TRAFD1-206ENST00000549358 FKBP8Q14318 412 aa15.01□□□□□ -0.01
TRAFD1-206ENST00000549358 SRP68Q9UHB9 627 aaKnown RBP15.01□□□□□ -0.01
TRAFD1-206ENST00000549358 KIF20BQ96Q89 1820 aa15.01□□□□□ -0.01
TRAFD1-206ENST00000549358 PTCD1O75127 700 aaKnown RBP15□□□□□ -0.01
TRAFD1-206ENST00000549358 HSPA1AP0DMV8 641 aaKnown RBP15□□□□□ -0.01
TRAFD1-206ENST00000549358 HSPA1BP0DMV9 641 aaKnown RBP15□□□□□ -0.01
TRAFD1-206ENST00000549358 DDR1Q08345 913 aa15□□□□□ -0.01
TRAFD1-206ENST00000549358 BRCA1P38398 1863 aaKnown RBP14.99□□□□□ -0.01
TRAFD1-206ENST00000549358 CABP4P57796 275 aa14.99□□□□□ -0.01
TRAFD1-206ENST00000549358 CDCA8Q53HL2 280 aa14.99□□□□□ -0.01
TRAFD1-206ENST00000549358 POLKQ9UBT6 870 aa14.99□□□□□ -0.01
TRAFD1-206ENST00000549358 VEGFAP15692 232 aaPredicted RBP14.98□□□□□ -0.01
TRAFD1-206ENST00000549358 CRKLP46109 303 aaKnown RBP14.98□□□□□ -0.01
TRAFD1-206ENST00000549358 EIF4A2Q14240 407 aaKnown RBP14.98□□□□□ -0.01
TRAFD1-206ENST00000549358 ARFGEF1Q9Y6D6 1849 aa14.98□□□□□ -0.01
TRAFD1-206ENST00000549358 USP42Q9H9J4 1324 aaKnown RBP14.97□□□□□ -0.01
TRAFD1-206ENST00000549358 HSP90AB1P08238 724 aaKnown RBP14.97□□□□□ -0.01
TRAFD1-206ENST00000549358 RASSF7Q02833 373 aa14.97□□□□□ -0.01
TRAFD1-206ENST00000549358 ZNF831Q5JPB2 1677 aa14.97□□□□□ -0.01
TRAFD1-206ENST00000549358 GLTPD2A6NH11 291 aa14.96□□□□□ -0.01
TRAFD1-206ENST00000549358 TM4SF1P30408 202 aa14.96□□□□□ -0.01
TRAFD1-206ENST00000549358 TNNT2P45379 298 aaPredicted RBP14.96□□□□□ -0.01
TRAFD1-206ENST00000549358 TNRC6CQ9HCJ0 1690 aaKnown RBP14.96□□□□□ -0.01
TRAFD1-206ENST00000549358 COL5A3P25940 1745 aaPredicted RBP14.95□□□□□ -0.02
TRAFD1-206ENST00000549358 POLRMTO00411 1230 aaKnown RBP14.95□□□□□ -0.02
TRAFD1-206ENST00000549358 PLEKHO1Q53GL0 409 aaPredicted RBP14.95□□□□□ -0.02
TRAFD1-206ENST00000549358 NFATC2IPQ8NCF5 419 aa14.95□□□□□ -0.02
TRAFD1-206ENST00000549358 ZC3H4Q9UPT8 1303 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms