RNA–Protein interactions for RNA: ENST00000549107.5

PTPRR-208, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-208ENST00000549107 STRN4Q9NRL3 753 aa14.36□□□□□ -0.11
PTPRR-208ENST00000549107 KDM6AO15550 1401 aaPredicted RBP14.35□□□□□ -0.11
PTPRR-208ENST00000549107 PHKG2P15735 406 aa14.35□□□□□ -0.11
PTPRR-208ENST00000549107 AAMPQ13685 434 aa14.35□□□□□ -0.11
PTPRR-208ENST00000549107 LARP1Q6PKG0 1096 aaKnown RBP14.35□□□□□ -0.11
PTPRR-208ENST00000549107 ARHGAP45Q92619 1136 aa14.35□□□□□ -0.11
PTPRR-208ENST00000549107 SOS1Q07889 1333 aaPredicted RBP14.35□□□□□ -0.11
PTPRR-208ENST00000549107 PLCH1Q4KWH8 1693 aa14.34□□□□□ -0.11
PTPRR-208ENST00000549107 IFNL2Q8IZJ0 200 aa14.34□□□□□ -0.11
PTPRR-208ENST00000549107 BTG4Q9NY30 223 aa14.34□□□□□ -0.11
PTPRR-208ENST00000549107 MRC1P22897 1456 aa14.33□□□□□ -0.12
PTPRR-208ENST00000549107 BTBD11A6QL63 1104 aa14.33□□□□□ -0.12
PTPRR-208ENST00000549107 HSPA1LP34931 641 aa14.33□□□□□ -0.12
PTPRR-208ENST00000549107 TMEM57Q8N5G2 664 aa14.33□□□□□ -0.12
PTPRR-208ENST00000549107 SHANK3Q9BYB0 1731 aa14.32□□□□□ -0.12
PTPRR-208ENST00000549107 CYP27B1O15528 508 aa14.32□□□□□ -0.12
PTPRR-208ENST00000549107 IL2RBP14784 551 aa14.32□□□□□ -0.12
PTPRR-208ENST00000549107 ITPRIPQ8IWB1 547 aa14.32□□□□□ -0.12
PTPRR-208ENST00000549107 API5Q9BZZ5 524 aaKnown RBP14.32□□□□□ -0.12
PTPRR-208ENST00000549107 ABCC4O15439 1325 aa14.32□□□□□ -0.12
PTPRR-208ENST00000549107 KDM2BQ8NHM5 1336 aa14.32□□□□□ -0.12
PTPRR-208ENST00000549107 HSP90AB1P08238 724 aaKnown RBP14.31□□□□□ -0.12
PTPRR-208ENST00000549107 EIF4A1P60842 406 aaKnown RBP14.31□□□□□ -0.12
PTPRR-208ENST00000549107 DDX19BQ9UMR2 479 aa14.31□□□□□ -0.12
PTPRR-208ENST00000549107 NRAPQ86VF7 1730 aa14.31□□□□□ -0.12
PTPRR-208ENST00000549107 PCDH11XQ9BZA7 1347 aa14.31□□□□□ -0.12
PTPRR-208ENST00000549107 PCDH11YQ9BZA8 1340 aa14.31□□□□□ -0.12
PTPRR-208ENST00000549107 KCNQ3O43525 872 aa14.3□□□□□ -0.12
PTPRR-208ENST00000549107 CENPQQ7L2Z9 268 aaPredicted RBP14.3□□□□□ -0.12
PTPRR-208ENST00000549107 ZCRB1Q8TBF4 217 aaKnown RBP14.3□□□□□ -0.12
PTPRR-208ENST00000549107 DCAF5Q96JK2 942 aa14.3□□□□□ -0.12
PTPRR-208ENST00000549107 RGS12O14924 1447 aa14.3□□□□□ -0.12
PTPRR-208ENST00000549107 WNK3Q9BYP7 1800 aa14.29□□□□□ -0.12
PTPRR-208ENST00000549107 SLC4A2P04920 1241 aa14.29□□□□□ -0.12
PTPRR-208ENST00000549107 HOXB7P09629 217 aa14.29□□□□□ -0.12
PTPRR-208ENST00000549107 CCDC30Q5VVM6 783 aa14.29□□□□□ -0.12
PTPRR-208ENST00000549107 STK31Q9BXU1 1019 aa14.29□□□□□ -0.12
PTPRR-208ENST00000549107 SLC52A2Q9HAB3 445 aa14.29□□□□□ -0.12
PTPRR-208ENST00000549107 PTPRCP08575 1304 aa14.29□□□□□ -0.12
PTPRR-208ENST00000549107 DISP2A7MBM2 1401 aa14.28□□□□□ -0.12
PTPRR-208ENST00000549107 ADAMTS2O95450 1211 aa14.28□□□□□ -0.12
PTPRR-208ENST00000549107 CACNA1FO60840 1977 aa14.27□□□□□ -0.12
PTPRR-208ENST00000549107 NWD2Q9ULI1 1742 aa14.27□□□□□ -0.12
PTPRR-208ENST00000549107 HEG1Q9ULI3 1381 aa14.27□□□□□ -0.12
PTPRR-208ENST00000549107 HDGFL1Q5TGJ6 251 aa14.27□□□□□ -0.13
PTPRR-208ENST00000549107 USP35Q9P2H5 1018 aa14.27□□□□□ -0.13
PTPRR-208ENST00000549107 PCDHB15Q9Y5E8 787 aa14.27□□□□□ -0.13
PTPRR-208ENST00000549107 NUTM2BA6NNL0 878 aaPredicted RBP14.26□□□□□ -0.13
PTPRR-208ENST00000549107 NUTM2EB1AL46 878 aaPredicted RBP14.26□□□□□ -0.13
PTPRR-208ENST00000549107 G2E3Q7L622 706 aa14.26□□□□□ -0.13
PTPRR-208ENST00000549107 NUTM2AQ8IVF1 878 aaPredicted RBP14.26□□□□□ -0.13
PTPRR-208ENST00000549107 NECTIN2Q92692 538 aa14.26□□□□□ -0.13
PTPRR-208ENST00000549107 JCADQ9P266 1359 aa14.25□□□□□ -0.13
PTPRR-208ENST00000549107 IGHDP01880 384 aa14.25□□□□□ -0.13
PTPRR-208ENST00000549107 NKX1-1Q15270 411 aaPredicted RBP14.25□□□□□ -0.13
PTPRR-208ENST00000549107 NFATC2IPQ8NCF5 419 aa14.25□□□□□ -0.13
PTPRR-208ENST00000549107 CHMP4AQ9BY43 222 aa14.25□□□□□ -0.13
PTPRR-208ENST00000549107 CHMP4BQ9H444 224 aaKnown RBP14.25□□□□□ -0.13
PTPRR-208ENST00000549107 ZBTB40Q9NUA8 1239 aa14.25□□□□□ -0.13
PTPRR-208ENST00000549107 C5P01031 1676 aa14.24□□□□□ -0.13
PTPRR-208ENST00000549107 CABP4P57796 275 aa14.24□□□□□ -0.13
PTPRR-208ENST00000549107 INTS3Q68E01 1043 aaKnown RBP14.24□□□□□ -0.13
PTPRR-208ENST00000549107 ZNF790Q6PG37 636 aa14.24□□□□□ -0.13
PTPRR-208ENST00000549107 SLIT2O94813 1529 aa14.24□□□□□ -0.13
PTPRR-208ENST00000549107 TOGARAM1Q9Y4F4 1720 aa14.24□□□□□ -0.13
PTPRR-208ENST00000549107 PAPPAQ13219 1627 aa14.23□□□□□ -0.13
PTPRR-208ENST00000549107 ZBTB7BO15156 539 aaPredicted RBP14.23□□□□□ -0.13
PTPRR-208ENST00000549107 GIGYF1O75420 1035 aaPredicted RBP14.23□□□□□ -0.13
PTPRR-208ENST00000549107 EIF2S2P20042 333 aaKnown RBP14.23□□□□□ -0.13
PTPRR-208ENST00000549107 HOXD11P31277 338 aaPredicted RBP14.23□□□□□ -0.13
PTPRR-208ENST00000549107 FLIIQ13045 1269 aa14.23□□□□□ -0.13
PTPRR-208ENST00000549107 SLC39A6Q13433 755 aa14.23□□□□□ -0.13
PTPRR-208ENST00000549107 DDX54Q8TDD1 881 aaKnown RBP14.23□□□□□ -0.13
PTPRR-208ENST00000549107 TSHZ2Q9NRE2 1034 aa14.23□□□□□ -0.13
PTPRR-208ENST00000549107 N4BP2Q86UW6 1770 aaPredicted RBP14.23□□□□□ -0.13
PTPRR-208ENST00000549107 ERVV-2B6SEH9 535 aa14.22□□□□□ -0.13
PTPRR-208ENST00000549107 RNF39Q9H2S5 420 aa14.22□□□□□ -0.13
PTPRR-208ENST00000549107 GLI3P10071 1580 aa14.22□□□□□ -0.13
PTPRR-208ENST00000549107 SPATA31A1Q5TZJ5 1347 aa14.21□□□□□ -0.13
PTPRR-208ENST00000549107 PXDNLA1KZ92 1463 aa14.21□□□□□ -0.13
PTPRR-208ENST00000549107 TTC5Q8N0Z6 440 aa14.21□□□□□ -0.13
PTPRR-208ENST00000549107 RWDD1Q9H446 243 aaPredicted RBP14.21□□□□□ -0.13
PTPRR-208ENST00000549107 CHPF2Q9P2E5 772 aa14.21□□□□□ -0.13
PTPRR-208ENST00000549107 TNS2Q63HR2 1409 aa14.21□□□□□ -0.13
PTPRR-208ENST00000549107 UBR2Q8IWV8 1755 aa14.2□□□□□ -0.14
PTPRR-208ENST00000549107 PRAMEF22A3QJZ6 481 aa14.2□□□□□ -0.14
PTPRR-208ENST00000549107 FKBP5Q13451 457 aaPredicted RBP14.2□□□□□ -0.14
PTPRR-208ENST00000549107 HDAC1Q13547 482 aaPredicted RBP14.2□□□□□ -0.14
PTPRR-208ENST00000549107 LAMB4A4D0S4 1761 aa14.19□□□□□ -0.14
PTPRR-208ENST00000549107 LRP6O75581 1613 aa14.19□□□□□ -0.14
PTPRR-208ENST00000549107 SPATA31A5Q5VU36 1347 aa14.19□□□□□ -0.14
PTPRR-208ENST00000549107 SPATA31A7Q8IWB4 1347 aa14.19□□□□□ -0.14
PTPRR-208ENST00000549107 F6X3S4 739 aa14.19□□□□□ -0.14
PTPRR-208ENST00000549107 CCT4P50991 539 aaKnown RBP14.19□□□□□ -0.14
PTPRR-208ENST00000549107 ZNF496Q96IT1 587 aaPredicted RBP14.19□□□□□ -0.14
PTPRR-208ENST00000549107 CDCA7Q9BWT1 371 aaPredicted RBP14.19□□□□□ -0.14
PTPRR-208ENST00000549107 DBF4Q9UBU7 674 aaPredicted RBP14.19□□□□□ -0.14
PTPRR-208ENST00000549107 THRAP3Q9Y2W1 955 aaKnown RBP14.19□□□□□ -0.14
PTPRR-208ENST00000549107 SPATA31A6Q5VVP1 1343 aa14.18□□□□□ -0.14
PTPRR-208ENST00000549107 SKAP1Q86WV1 359 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms