RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, human

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DEPDC4-206	ENST00000549100	SHROOM4	Q9ULL8	1493 aa		4.28	□□□□□ -1.72
DEPDC4-206	ENST00000549100	H2AFB1	P0C5Y9	115 aa		4.27	□□□□□ -1.73
DEPDC4-206	ENST00000549100	H2AFB2	P0C5Z0	115 aa		4.27	□□□□□ -1.73
DEPDC4-206	ENST00000549100	CHSY3	Q70JA7	882 aa		4.27	□□□□□ -1.73
DEPDC4-206	ENST00000549100	RNF135	Q8IUD6	432 aa		4.27	□□□□□ -1.73
DEPDC4-206	ENST00000549100	NEURL1B	A8MQ27	555 aa		4.26	□□□□□ -1.73
DEPDC4-206	ENST00000549100	FAM229A	H3BQW9	127 aa		4.26	□□□□□ -1.73
DEPDC4-206	ENST00000549100	KLF15	Q9UIH9	416 aa		4.26	□□□□□ -1.73
DEPDC4-206	ENST00000549100	SPDYE5	A6NIY4	337 aa		4.25	□□□□□ -1.73
DEPDC4-206	ENST00000549100	BMP4	P12644	408 aa		4.25	□□□□□ -1.73
DEPDC4-206	ENST00000549100	IRAK1	P51617	712 aa		4.25	□□□□□ -1.73
DEPDC4-206	ENST00000549100	DHX9	Q08211	1270 aa	Known RBP	4.25	□□□□□ -1.73
DEPDC4-206	ENST00000549100	MYSM1	Q5VVJ2	828 aa		4.25	□□□□□ -1.73
DEPDC4-206	ENST00000549100	PROCA1	Q8NCQ7	364 aa	Predicted RBP	4.25	□□□□□ -1.73
DEPDC4-206	ENST00000549100	PCMTD1	Q96MG8	357 aa	Predicted RBP	4.25	□□□□□ -1.73
DEPDC4-206	ENST00000549100	POLR3E	Q9NVU0	708 aa		4.25	□□□□□ -1.73
DEPDC4-206	ENST00000549100	PCDHB15	Q9Y5E8	787 aa		4.25	□□□□□ -1.73
DEPDC4-206	ENST00000549100	SUPT5H	O00267	1087 aa	Known RBP	4.24	□□□□□ -1.73
DEPDC4-206	ENST00000549100	F11	P03951	625 aa		4.24	□□□□□ -1.73
DEPDC4-206	ENST00000549100	SKIV2L	Q15477	1246 aa	Known RBP	4.24	□□□□□ -1.73
DEPDC4-206	ENST00000549100	NBPF14	Q5TI25	921 aa		4.24	□□□□□ -1.73
DEPDC4-206	ENST00000549100	FBXO31	Q5XUX0	539 aa	Predicted RBP	4.24	□□□□□ -1.73
DEPDC4-206	ENST00000549100	NBPF10	Q6P3W6	841 aa	Known RBP	4.24	□□□□□ -1.73
DEPDC4-206	ENST00000549100	NBPF15	Q8N660	670 aa		4.24	□□□□□ -1.73
DEPDC4-206	ENST00000549100	TBC1D2	Q9BYX2	928 aa		4.24	□□□□□ -1.73
DEPDC4-206	ENST00000549100	GRIK4	Q16099	956 aa		4.23	□□□□□ -1.73
DEPDC4-206	ENST00000549100	ABHD17A	Q96GS6	310 aa		4.23	□□□□□ -1.73
DEPDC4-206	ENST00000549100	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
DEPDC4-206	ENST00000549100	RSPH6A	Q9H0K4	717 aa		4.23	□□□□□ -1.73
DEPDC4-206	ENST00000549100	LIMD1	Q9UGP4	676 aa		4.23	□□□□□ -1.73
DEPDC4-206	ENST00000549100	RNF112	Q9ULX5	631 aa		4.23	□□□□□ -1.73
DEPDC4-206	ENST00000549100	OAS3	Q9Y6K5	1087 aa	Known RBP	4.23	□□□□□ -1.73
DEPDC4-206	ENST00000549100	APBA3	O96018	575 aa		4.22	□□□□□ -1.73
DEPDC4-206	ENST00000549100	CLK2	P49760	499 aa	Known RBP	4.22	□□□□□ -1.73
DEPDC4-206	ENST00000549100	ZMYND15	Q9H091	742 aa		4.22	□□□□□ -1.73
DEPDC4-206	ENST00000549100	GPAM	Q9HCL2	828 aa		4.22	□□□□□ -1.73
DEPDC4-206	ENST00000549100	PCMTD2	Q9NV79	361 aa		4.22	□□□□□ -1.73
DEPDC4-206	ENST00000549100	RAB15	P59190	212 aa		4.21	□□□□□ -1.74
DEPDC4-206	ENST00000549100	MCM6	Q14566	821 aa		4.21	□□□□□ -1.74
DEPDC4-206	ENST00000549100	FCHSD1	Q86WN1	690 aa		4.21	□□□□□ -1.74
DEPDC4-206	ENST00000549100	ARMC2	Q8NEN0	867 aa		4.21	□□□□□ -1.74
DEPDC4-206	ENST00000549100	TIMMDC1	Q9NPL8	285 aa		4.21	□□□□□ -1.74
DEPDC4-206	ENST00000549100	HCN2	Q9UL51	889 aa		4.21	□□□□□ -1.74
DEPDC4-206	ENST00000549100	ERVH48-1	M5A8F1	160 aa		4.2	□□□□□ -1.74
DEPDC4-206	ENST00000549100	MEN1	O00255	615 aa		4.2	□□□□□ -1.74
DEPDC4-206	ENST00000549100	BNIP3L	O60238	219 aa		4.2	□□□□□ -1.74
DEPDC4-206	ENST00000549100	HRC	P23327	699 aa		4.2	□□□□□ -1.74
DEPDC4-206	ENST00000549100	FLII	Q13045	1269 aa		4.2	□□□□□ -1.74
DEPDC4-206	ENST00000549100	COL9A3	Q14050	684 aa	Predicted RBP	4.2	□□□□□ -1.74
DEPDC4-206	ENST00000549100	GRIP2	Q9C0E4	1043 aa		4.2	□□□□□ -1.74
DEPDC4-206	ENST00000549100	NDFIP2	Q9NV92	336 aa		4.2	□□□□□ -1.74
DEPDC4-206	ENST00000549100	PHF24	Q9UPV7	400 aa		4.2	□□□□□ -1.74
DEPDC4-206	ENST00000549100	ARAF	P10398	606 aa		4.19	□□□□□ -1.74
DEPDC4-206	ENST00000549100	FGFR3	P22607	806 aa		4.19	□□□□□ -1.74
DEPDC4-206	ENST00000549100	SSTR4	P31391	388 aa		4.19	□□□□□ -1.74
DEPDC4-206	ENST00000549100	DIXDC1	Q155Q3	683 aa		4.19	□□□□□ -1.74
DEPDC4-206	ENST00000549100	RSBN1L	Q6PCB5	846 aa	Predicted RBP	4.19	□□□□□ -1.74
DEPDC4-206	ENST00000549100	CLUAP1	Q96AJ1	413 aa		4.19	□□□□□ -1.74
DEPDC4-206	ENST00000549100	OCSTAMP	Q9BR26	566 aa		4.19	□□□□□ -1.74
DEPDC4-206	ENST00000549100	ATP1B4	Q9UN42	357 aa	Predicted RBP	4.19	□□□□□ -1.74
DEPDC4-206	ENST00000549100		A0A1W2PRU2	124 aa		4.18	□□□□□ -1.74
DEPDC4-206	ENST00000549100	GPC1	P35052	558 aa		4.18	□□□□□ -1.74
DEPDC4-206	ENST00000549100	RFC5	P40937	340 aa		4.18	□□□□□ -1.74
DEPDC4-206	ENST00000549100	QPCT	Q16769	361 aa		4.18	□□□□□ -1.74
DEPDC4-206	ENST00000549100	CSPP1	Q1MSJ5	1256 aa		4.18	□□□□□ -1.74
DEPDC4-206	ENST00000549100	PPP2R2D	Q66LE6	453 aa		4.18	□□□□□ -1.74
DEPDC4-206	ENST00000549100	CABLES1	Q8TDN4	633 aa		4.18	□□□□□ -1.74
DEPDC4-206	ENST00000549100	TP53INP1	Q96A56	240 aa		4.18	□□□□□ -1.74
DEPDC4-206	ENST00000549100	SLC10A4	Q96EP9	437 aa		4.18	□□□□□ -1.74
DEPDC4-206	ENST00000549100	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	4.18	□□□□□ -1.74
DEPDC4-206	ENST00000549100	SPATA31C2	B4DYI2	1134 aa		4.17	□□□□□ -1.74
DEPDC4-206	ENST00000549100	MED26	O95402	600 aa		4.17	□□□□□ -1.74
DEPDC4-206	ENST00000549100	GJA5	P36382	358 aa		4.17	□□□□□ -1.74
DEPDC4-206	ENST00000549100	ADGRE1	Q14246	886 aa		4.17	□□□□□ -1.74
DEPDC4-206	ENST00000549100	MBTPS1	Q14703	1052 aa		4.17	□□□□□ -1.74
DEPDC4-206	ENST00000549100	TUSC1	Q2TAM9	212 aa		4.17	□□□□□ -1.74
DEPDC4-206	ENST00000549100	PRRT3	Q5FWE3	981 aa		4.17	□□□□□ -1.74
DEPDC4-206	ENST00000549100	SLC27A3	Q5K4L6	730 aa		4.17	□□□□□ -1.74
DEPDC4-206	ENST00000549100	POM121	Q96HA1	1249 aa		4.17	□□□□□ -1.74
DEPDC4-206	ENST00000549100	RUBCNL	Q9H714	662 aa		4.17	□□□□□ -1.74
DEPDC4-206	ENST00000549100	C1orf115	Q9H7X2	142 aa		4.17	□□□□□ -1.74
DEPDC4-206	ENST00000549100	CYLD	Q9NQC7	956 aa		4.17	□□□□□ -1.74
DEPDC4-206	ENST00000549100	SNRK	Q9NRH2	765 aa		4.17	□□□□□ -1.74
DEPDC4-206	ENST00000549100	LILRB3	O75022	631 aa		4.16	□□□□□ -1.74
DEPDC4-206	ENST00000549100	ADAMTS4	O75173	837 aa		4.16	□□□□□ -1.74
DEPDC4-206	ENST00000549100	UBTF	P17480	764 aa	Known RBP	4.16	□□□□□ -1.74
DEPDC4-206	ENST00000549100	RTL5	Q5HYW3	569 aa	Predicted RBP	4.16	□□□□□ -1.74
DEPDC4-206	ENST00000549100	ARHGAP9	Q9BRR9	750 aa		4.16	□□□□□ -1.74
DEPDC4-206	ENST00000549100	SSBP4	Q9BWG4	385 aa	Predicted RBP	4.16	□□□□□ -1.74
DEPDC4-206	ENST00000549100	CDV3	Q9UKY7	258 aa	Known RBP	4.16	□□□□□ -1.74
DEPDC4-206	ENST00000549100	ZCCHC6	Q5VYS8	1495 aa	Known RBP	4.16	□□□□□ -1.74
DEPDC4-206	ENST00000549100	ARID3C	A6NKF2	412 aa		4.15	□□□□□ -1.75
DEPDC4-206	ENST00000549100	WASL	O00401	505 aa	Predicted RBP	4.15	□□□□□ -1.75
DEPDC4-206	ENST00000549100	SELP	P16109	830 aa		4.15	□□□□□ -1.75
DEPDC4-206	ENST00000549100	PHKA2	P46019	1235 aa		4.15	□□□□□ -1.75
DEPDC4-206	ENST00000549100	NRG1	Q02297	640 aa	Predicted RBP	4.15	□□□□□ -1.75
DEPDC4-206	ENST00000549100	WDR44	Q5JSH3	913 aa		4.15	□□□□□ -1.75
DEPDC4-206	ENST00000549100		A6NJR5	290 aa		4.14	□□□□□ -1.75
DEPDC4-206	ENST00000549100	ATP5J2-PTCD1	G3V325	749 aa		4.14	□□□□□ -1.75
DEPDC4-206	ENST00000549100	C8A	P07357	584 aa		4.14	□□□□□ -1.75

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