RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 SH3RF1Q7Z6J0 888 aa5.73□□□□□ -1.49
APAF1-208ENST00000549007 ATP1A2P50993 1020 aa5.72□□□□□ -1.49
APAF1-208ENST00000549007 SIX5Q8N196 739 aa5.72□□□□□ -1.49
APAF1-208ENST00000549007 FCF1Q9Y324 198 aaKnown RBP5.72□□□□□ -1.49
APAF1-208ENST00000549007 FHOD3Q2V2M9 1422 aa5.72□□□□□ -1.49
APAF1-208ENST00000549007 TK2O00142 265 aa5.72□□□□□ -1.49
APAF1-208ENST00000549007 MAP7D1Q3KQU3 841 aa5.72□□□□□ -1.49
APAF1-208ENST00000549007 TBCELQ5QJ74 424 aa5.72□□□□□ -1.49
APAF1-208ENST00000549007 LARGE2Q8N3Y3 721 aa5.72□□□□□ -1.49
APAF1-208ENST00000549007 KCTD12Q96CX2 325 aaKnown RBP5.72□□□□□ -1.49
APAF1-208ENST00000549007 SLC10A4Q96EP9 437 aa5.72□□□□□ -1.49
APAF1-208ENST00000549007 FAM161BQ96MY7 647 aa5.72□□□□□ -1.49
APAF1-208ENST00000549007 GPSM3Q9Y4H4 160 aa5.72□□□□□ -1.49
APAF1-208ENST00000549007 DISP1Q96F81 1524 aa5.72□□□□□ -1.49
APAF1-208ENST00000549007 SHROOM2Q13796 1616 aa5.72□□□□□ -1.49
APAF1-208ENST00000549007 PPEF1O14829 653 aaPredicted RBP5.72□□□□□ -1.49
APAF1-208ENST00000549007 TRIM50Q86XT4 487 aa5.72□□□□□ -1.49
APAF1-208ENST00000549007 MTRQ99707 1265 aa5.72□□□□□ -1.49
APAF1-208ENST00000549007 RNF19AQ9NV58 838 aa5.72□□□□□ -1.49
APAF1-208ENST00000549007 ARAP1Q96P48 1450 aa5.72□□□□□ -1.49
APAF1-208ENST00000549007 S1PR4O95977 384 aa5.71□□□□□ -1.49
APAF1-208ENST00000549007 ECM1Q16610 540 aa5.71□□□□□ -1.49
APAF1-208ENST00000549007 C9orf131Q5VYM1 1079 aa5.71□□□□□ -1.49
APAF1-208ENST00000549007 RBM19Q9Y4C8 960 aaKnown RBP5.71□□□□□ -1.49
APAF1-208ENST00000549007 ARMC2Q8NEN0 867 aa5.71□□□□□ -1.5
APAF1-208ENST00000549007 TNIKQ9UKE5 1360 aa5.71□□□□□ -1.5
APAF1-208ENST00000549007 UGGT2Q9NYU1 1516 aa5.71□□□□□ -1.5
APAF1-208ENST00000549007 ZPR1O75312 459 aa5.71□□□□□ -1.5
APAF1-208ENST00000549007 TSNAXIP1Q2TAA8 658 aa5.71□□□□□ -1.5
APAF1-208ENST00000549007 ZNF511Q8NB15 262 aa5.71□□□□□ -1.5
APAF1-208ENST00000549007 CEP162Q5TB80 1403 aa5.7□□□□□ -1.5
APAF1-208ENST00000549007 ICMTO60725 284 aa5.7□□□□□ -1.5
APAF1-208ENST00000549007 PTPN5P54829 565 aa5.7□□□□□ -1.5
APAF1-208ENST00000549007 ARHGAP4P98171 946 aa5.7□□□□□ -1.5
APAF1-208ENST00000549007 KIAA0556O60303 1618 aa5.7□□□□□ -1.5
APAF1-208ENST00000549007 CLIP1P30622 1438 aa5.7□□□□□ -1.5
APAF1-208ENST00000549007 TAS1R3Q7RTX0 852 aa5.7□□□□□ -1.5
APAF1-208ENST00000549007 PPP1R1BQ9UD71 204 aaPredicted RBP5.7□□□□□ -1.5
APAF1-208ENST00000549007 CARMIL2Q6F5E8 1435 aa5.7□□□□□ -1.5
APAF1-208ENST00000549007 TCF3P15923 654 aa5.69□□□□□ -1.5
APAF1-208ENST00000549007 TNS4Q8IZW8 715 aa5.69□□□□□ -1.5
APAF1-208ENST00000549007 SAP130Q9H0E3 1048 aa5.69□□□□□ -1.5
APAF1-208ENST00000549007 ARHGAP35Q9NRY4 1499 aa5.69□□□□□ -1.5
APAF1-208ENST00000549007 SIRT1Q96EB6 747 aa5.69□□□□□ -1.5
APAF1-208ENST00000549007 PTPRGP23470 1445 aa5.69□□□□□ -1.5
APAF1-208ENST00000549007 ADH1BP00325 375 aa5.69□□□□□ -1.5
APAF1-208ENST00000549007 GPKOWQ92917 476 aaPredicted RBP eCLIP5.69□□□□□ -1.5
APAF1-208ENST00000549007 RECKO95980 971 aa5.68□□□□□ -1.5
APAF1-208ENST00000549007 BPHLQ86WA6 291 aaPredicted RBP5.68□□□□□ -1.5
APAF1-208ENST00000549007 SLC6A16Q9GZN6 736 aa5.68□□□□□ -1.5
APAF1-208ENST00000549007 SERTAD1Q9UHV2 236 aa5.68□□□□□ -1.5
APAF1-208ENST00000549007 C21orf2O43822 256 aa5.68□□□□□ -1.5
APAF1-208ENST00000549007 SH3BP2P78314 561 aa5.68□□□□□ -1.5
APAF1-208ENST00000549007 ARID5BQ14865 1188 aa5.68□□□□□ -1.5
APAF1-208ENST00000549007 TMPRSS4Q9NRS4 437 aa5.68□□□□□ -1.5
APAF1-208ENST00000549007 PLB1Q6P1J6 1458 aa5.68□□□□□ -1.5
APAF1-208ENST00000549007 SAMD9Q5K651 1589 aa5.68□□□□□ -1.5
APAF1-208ENST00000549007 POTEMA6NI47 508 aa5.67□□□□□ -1.5
APAF1-208ENST00000549007 MPSTP25325 297 aa5.67□□□□□ -1.5
APAF1-208ENST00000549007 THSD4Q6ZMP0 1018 aa5.67□□□□□ -1.5
APAF1-208ENST00000549007 FBXO33Q7Z6M2 555 aa5.67□□□□□ -1.5
APAF1-208ENST00000549007 SETDB2Q96T68 719 aa5.67□□□□□ -1.5
APAF1-208ENST00000549007 TSPAN10Q9H1Z9 355 aaPredicted RBP5.67□□□□□ -1.5
APAF1-208ENST00000549007 CYLDQ9NQC7 956 aa5.67□□□□□ -1.5
APAF1-208ENST00000549007 RAB6BQ9NRW1 208 aa5.67□□□□□ -1.5
APAF1-208ENST00000549007 SCG3Q8WXD2 468 aaKnown RBP5.67□□□□□ -1.5
APAF1-208ENST00000549007 ZNF358Q9NW07 568 aa5.67□□□□□ -1.5
APAF1-208ENST00000549007 NBPF20Q3BBV1 942 aa5.67□□□□□ -1.5
APAF1-208ENST00000549007 TMEM229AB2RXF0 380 aa5.66□□□□□ -1.5
APAF1-208ENST00000549007 ERVH48-1M5A8F1 160 aa5.66□□□□□ -1.5
APAF1-208ENST00000549007 WEE1P30291 646 aa5.66□□□□□ -1.5
APAF1-208ENST00000549007 USP4Q13107 963 aa5.66□□□□□ -1.5
APAF1-208ENST00000549007 LCE2DQ5TA82 110 aaPredicted RBP5.66□□□□□ -1.5
APAF1-208ENST00000549007 FKBP4Q02790 459 aaKnown RBP eCLIP5.66□□□□□ -1.5
APAF1-208ENST00000549007 C1orf216Q8TAB5 229 aa5.66□□□□□ -1.5
APAF1-208ENST00000549007 KCTD15Q96SI1 283 aaPredicted RBP5.66□□□□□ -1.5
APAF1-208ENST00000549007 LZTS3O60299 673 aaPredicted RBP5.65□□□□□ -1.5
APAF1-208ENST00000549007 INTS6LQ5JSJ4 861 aaKnown RBP5.65□□□□□ -1.5
APAF1-208ENST00000549007 DCTN4Q9UJW0 460 aa5.65□□□□□ -1.5
APAF1-208ENST00000549007 EFCAB5A4FU69 1503 aa5.65□□□□□ -1.5
APAF1-208ENST00000549007 P4HBP07237 508 aaKnown RBP5.65□□□□□ -1.5
APAF1-208ENST00000549007 PLA2G2CQ5R387 149 aa5.65□□□□□ -1.5
APAF1-208ENST00000549007 ATCAYQ86WG3 371 aa5.65□□□□□ -1.5
APAF1-208ENST00000549007 TMC1Q8TDI8 760 aa5.65□□□□□ -1.5
APAF1-208ENST00000549007 CCDC87Q9NVE4 849 aa5.65□□□□□ -1.5
APAF1-208ENST00000549007 ZNF326Q5BKZ1 582 aaKnown RBP5.65□□□□□ -1.51
APAF1-208ENST00000549007 FAM26DQ5JW98 314 aa5.65□□□□□ -1.51
APAF1-208ENST00000549007 TMC7Q7Z402 723 aa5.65□□□□□ -1.51
APAF1-208ENST00000549007 BACH2Q9BYV9 841 aa5.65□□□□□ -1.51
APAF1-208ENST00000549007 AAMPQ13685 434 aa5.64□□□□□ -1.51
APAF1-208ENST00000549007 ASB16Q96NS5 453 aa5.64□□□□□ -1.51
APAF1-208ENST00000549007 UACAQ9BZF9 1416 aa5.64□□□□□ -1.51
APAF1-208ENST00000549007 ADCY10Q96PN6 1610 aa5.64□□□□□ -1.51
APAF1-208ENST00000549007 MAPK8P45983 427 aa5.64□□□□□ -1.51
APAF1-208ENST00000549007 SCNN1DP51172 638 aa5.64□□□□□ -1.51
APAF1-208ENST00000549007 TJAP1Q5JTD0 557 aa5.64□□□□□ -1.51
APAF1-208ENST00000549007 WWC3Q9ULE0 1092 aa5.64□□□□□ -1.51
APAF1-208ENST00000549007 TLL2Q9Y6L7 1015 aa5.64□□□□□ -1.51
APAF1-208ENST00000549007 A0A1W2PRU2 124 aa5.64□□□□□ -1.51
APAF1-208ENST00000549007 FSHRP23945 695 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms