RNA–Protein interactions for RNA: ENST00000548980.1

NCKAP1L-206, Transcript of NCK associated protein 1 like, humanhuman

TSL 2

Gene NCKAP1L, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-206ENST00000548980 C4AP0C0L4 1744 aa13.72□□□□□ -0.21
NCKAP1L-206ENST00000548980 DPEP1P16444 411 aa13.71□□□□□ -0.21
NCKAP1L-206ENST00000548980 ITPK1Q13572 414 aa13.71□□□□□ -0.21
NCKAP1L-206ENST00000548980 PUS7Q96PZ0 661 aaKnown RBP13.71□□□□□ -0.21
NCKAP1L-206ENST00000548980 SIN3AQ96ST3 1273 aa13.71□□□□□ -0.21
NCKAP1L-206ENST00000548980 CARD11Q9BXL7 1154 aa13.71□□□□□ -0.21
NCKAP1L-206ENST00000548980 INSRP06213 1382 aa13.71□□□□□ -0.22
NCKAP1L-206ENST00000548980 KDM2BQ8NHM5 1336 aa13.7□□□□□ -0.22
NCKAP1L-206ENST00000548980 HSP90AB2PQ58FF8 381 aa13.69□□□□□ -0.22
NCKAP1L-206ENST00000548980 CCDC87Q9NVE4 849 aa13.69□□□□□ -0.22
NCKAP1L-206ENST00000548980 FLT4P35916 1363 aa13.69□□□□□ -0.22
NCKAP1L-206ENST00000548980 HSPA1AP0DMV8 641 aaKnown RBP13.68□□□□□ -0.22
NCKAP1L-206ENST00000548980 HSPA1BP0DMV9 641 aaKnown RBP13.68□□□□□ -0.22
NCKAP1L-206ENST00000548980 ATP6V1AP38606 617 aa13.68□□□□□ -0.22
NCKAP1L-206ENST00000548980 NKX1-1Q15270 411 aaPredicted RBP13.68□□□□□ -0.22
NCKAP1L-206ENST00000548980 SMC1BQ8NDV3 1235 aa13.68□□□□□ -0.22
NCKAP1L-206ENST00000548980 NCAPD2Q15021 1401 aa13.67□□□□□ -0.22
NCKAP1L-206ENST00000548980 TMF1P82094 1093 aa13.67□□□□□ -0.22
NCKAP1L-206ENST00000548980 NLGN1Q8N2Q7 840 aa13.67□□□□□ -0.22
NCKAP1L-206ENST00000548980 RRAGCQ9HB90 399 aa13.67□□□□□ -0.22
NCKAP1L-206ENST00000548980 TMOD3Q9NYL9 352 aa13.67□□□□□ -0.22
NCKAP1L-206ENST00000548980 RNF181Q9P0P0 153 aa13.67□□□□□ -0.22
NCKAP1L-206ENST00000548980 ASAP1Q9ULH1 1129 aa13.67□□□□□ -0.22
NCKAP1L-206ENST00000548980 KDRP35968 1356 aa13.67□□□□□ -0.22
NCKAP1L-206ENST00000548980 KCNA3P22001 575 aa13.66□□□□□ -0.22
NCKAP1L-206ENST00000548980 NEUROD1Q13562 356 aa13.66□□□□□ -0.22
NCKAP1L-206ENST00000548980 TRAPPC3LQ5T215 181 aa13.66□□□□□ -0.22
NCKAP1L-206ENST00000548980 DCAF5Q96JK2 942 aa13.66□□□□□ -0.22
NCKAP1L-206ENST00000548980 GGNBP2Q9H3C7 697 aa13.66□□□□□ -0.22
NCKAP1L-206ENST00000548980 RTCBQ9Y3I0 505 aaKnown RBP13.66□□□□□ -0.22
NCKAP1L-206ENST00000548980 KIF24Q5T7B8 1368 aa13.66□□□□□ -0.22
NCKAP1L-206ENST00000548980 COL5A3P25940 1745 aaPredicted RBP13.64□□□□□ -0.23
NCKAP1L-206ENST00000548980 KIF20BQ96Q89 1820 aa13.64□□□□□ -0.23
NCKAP1L-206ENST00000548980 SBF1O95248 1867 aa13.64□□□□□ -0.23
NCKAP1L-206ENST00000548980 ZNF831Q5JPB2 1677 aa13.64□□□□□ -0.23
NCKAP1L-206ENST00000548980 FYB1O15117 783 aa13.64□□□□□ -0.23
NCKAP1L-206ENST00000548980 GYS1P13807 737 aa13.64□□□□□ -0.23
NCKAP1L-206ENST00000548980 PIM2Q9P1W9 311 aa13.64□□□□□ -0.23
NCKAP1L-206ENST00000548980 PARP3Q9Y6F1 533 aa13.64□□□□□ -0.23
NCKAP1L-206ENST00000548980 ADRA2BP18089 450 aa13.63□□□□□ -0.23
NCKAP1L-206ENST00000548980 DALRD3Q5D0E6 543 aaKnown RBP13.63□□□□□ -0.23
NCKAP1L-206ENST00000548980 ARHGEF1Q92888 912 aaKnown RBP13.63□□□□□ -0.23
NCKAP1L-206ENST00000548980 TESK2Q96S53 571 aa13.63□□□□□ -0.23
NCKAP1L-206ENST00000548980 ATG3Q9NT62 314 aa13.63□□□□□ -0.23
NCKAP1L-206ENST00000548980 SPG7Q9UQ90 795 aa13.63□□□□□ -0.23
NCKAP1L-206ENST00000548980 CNTNAP4Q9C0A0 1308 aa13.62□□□□□ -0.23
NCKAP1L-206ENST00000548980 SLC34A2O95436 690 aa13.61□□□□□ -0.23
NCKAP1L-206ENST00000548980 RFC4P35249 363 aa13.61□□□□□ -0.23
NCKAP1L-206ENST00000548980 SLC4A9Q96Q91 983 aa13.61□□□□□ -0.23
NCKAP1L-206ENST00000548980 ZC3H4Q9UPT8 1303 aaKnown RBP13.61□□□□□ -0.23
NCKAP1L-206ENST00000548980 KDM6AO15550 1401 aaPredicted RBP13.6□□□□□ -0.23
NCKAP1L-206ENST00000548980 PHKG2P15735 406 aa13.6□□□□□ -0.23
NCKAP1L-206ENST00000548980 RC3H1Q5TC82 1133 aaKnown RBP13.6□□□□□ -0.23
NCKAP1L-206ENST00000548980 ANKRD26Q9UPS8 1709 aa13.6□□□□□ -0.23
NCKAP1L-206ENST00000548980 EMILIN1Q9Y6C2 1016 aa13.6□□□□□ -0.23
NCKAP1L-206ENST00000548980 TONSLQ96HA7 1378 aa13.59□□□□□ -0.23
NCKAP1L-206ENST00000548980 RPS6KA4O75676 772 aa13.59□□□□□ -0.23
NCKAP1L-206ENST00000548980 CHRNA5P30532 468 aa13.59□□□□□ -0.23
NCKAP1L-206ENST00000548980 IFNL2Q8IZJ0 200 aa13.59□□□□□ -0.23
NCKAP1L-206ENST00000548980 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.59□□□□□ -0.23
NCKAP1L-206ENST00000548980 MYH14Q7Z406 1995 aaKnown RBP13.59□□□□□ -0.23
NCKAP1L-206ENST00000548980 TIAM2Q8IVF5 1701 aa13.59□□□□□ -0.23
NCKAP1L-206ENST00000548980 RASSF7Q02833 373 aa13.58□□□□□ -0.24
NCKAP1L-206ENST00000548980 DDR1Q08345 913 aa13.58□□□□□ -0.24
NCKAP1L-206ENST00000548980 RBM42Q9BTD8 480 aaKnown RBP13.58□□□□□ -0.24
NCKAP1L-206ENST00000548980 ST20-MTHFSA0A0A6YYL1 179 aa13.57□□□□□ -0.24
NCKAP1L-206ENST00000548980 VEGFAP15692 232 aaPredicted RBP13.57□□□□□ -0.24
NCKAP1L-206ENST00000548980 GLTPD2A6NH11 291 aa13.56□□□□□ -0.24
NCKAP1L-206ENST00000548980 FKBP8Q14318 412 aa13.56□□□□□ -0.24
NCKAP1L-206ENST00000548980 EYA1Q99502 592 aa13.56□□□□□ -0.24
NCKAP1L-206ENST00000548980 SRP68Q9UHB9 627 aaKnown RBP13.56□□□□□ -0.24
NCKAP1L-206ENST00000548980 USP42Q9H9J4 1324 aaKnown RBP13.55□□□□□ -0.24
NCKAP1L-206ENST00000548980 PPM1GO15355 546 aaPredicted RBP13.54□□□□□ -0.24
NCKAP1L-206ENST00000548980 LMNB1P20700 586 aa13.54□□□□□ -0.24
NCKAP1L-206ENST00000548980 ADAMTS7Q9UKP4 1686 aa13.53□□□□□ -0.24
NCKAP1L-206ENST00000548980 DLEC1Q9Y238 1755 aa13.53□□□□□ -0.24
NCKAP1L-206ENST00000548980 ERVV-2B6SEH9 535 aa13.53□□□□□ -0.24
NCKAP1L-206ENST00000548980 POLRMTO00411 1230 aaKnown RBP13.53□□□□□ -0.24
NCKAP1L-206ENST00000548980 SLC24A1O60721 1099 aa13.53□□□□□ -0.24
NCKAP1L-206ENST00000548980 WASHC2AQ641Q2 1341 aa13.53□□□□□ -0.24
NCKAP1L-206ENST00000548980 TJP1Q07157 1748 aa13.53□□□□□ -0.24
NCKAP1L-206ENST00000548980 CRKLP46109 303 aaKnown RBP13.52□□□□□ -0.25
NCKAP1L-206ENST00000548980 MKRN1Q9UHC7 482 aaKnown RBP13.52□□□□□ -0.25
NCKAP1L-206ENST00000548980 CCDC88AQ3V6T2 1871 aa13.51□□□□□ -0.25
NCKAP1L-206ENST00000548980 POTECB2RU33 542 aa13.51□□□□□ -0.25
NCKAP1L-206ENST00000548980 FOXN1O15353 648 aa13.51□□□□□ -0.25
NCKAP1L-206ENST00000548980 CREBZFQ9NS37 354 aa13.51□□□□□ -0.25
NCKAP1L-206ENST00000548980 PRDM10Q9NQV6 1147 aa13.5□□□□□ -0.25
NCKAP1L-206ENST00000548980 AFDNP55196 1824 aaKnown RBP13.5□□□□□ -0.25
NCKAP1L-206ENST00000548980 NRXN2Q9P2S2 1712 aa13.5□□□□□ -0.25
NCKAP1L-206ENST00000548980 NFKBIEO00221 500 aa13.49□□□□□ -0.25
NCKAP1L-206ENST00000548980 HSP90AB1P08238 724 aaKnown RBP13.49□□□□□ -0.25
NCKAP1L-206ENST00000548980 TM4SF1P30408 202 aa13.49□□□□□ -0.25
NCKAP1L-206ENST00000548980 CNTNAP1P78357 1384 aa13.48□□□□□ -0.25
NCKAP1L-206ENST00000548980 PTCD1O75127 700 aaKnown RBP13.48□□□□□ -0.25
NCKAP1L-206ENST00000548980 CABP4P57796 275 aa13.48□□□□□ -0.25
NCKAP1L-206ENST00000548980 CARD14Q9BXL6 1004 aa13.48□□□□□ -0.25
NCKAP1L-206ENST00000548980 EIF4A2Q14240 407 aaKnown RBP13.47□□□□□ -0.25
NCKAP1L-206ENST00000548980 USPL1Q5W0Q7 1092 aa13.47□□□□□ -0.25
NCKAP1L-206ENST00000548980 TTLL6Q8N841 843 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms