RNA–Protein interactions for RNA: ENST00000548916.1

NCKAP1L-205, Transcript of NCK associated protein 1 like, humanhuman

TSL 3

Gene NCKAP1L, Length 708 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-205ENST00000548916 MAP10Q9P2G4 905 aa9.68□□□□□ -0.86
NCKAP1L-205ENST00000548916 CTSOP43234 321 aaPredicted RBP9.67□□□□□ -0.86
NCKAP1L-205ENST00000548916 CBLBQ13191 982 aa9.67□□□□□ -0.86
NCKAP1L-205ENST00000548916 C1QTNF2Q9BXJ5 285 aa9.67□□□□□ -0.86
NCKAP1L-205ENST00000548916 LRRC4BQ9NT99 713 aa9.67□□□□□ -0.86
NCKAP1L-205ENST00000548916 SENP3-EIF4A1A0A087X0R7 540 aa9.66□□□□□ -0.86
NCKAP1L-205ENST00000548916 LMOD1P29536 600 aaPredicted RBP9.66□□□□□ -0.86
NCKAP1L-205ENST00000548916 FOXR1Q6PIV2 292 aa9.66□□□□□ -0.86
NCKAP1L-205ENST00000548916 POLMQ9NP87 494 aaPredicted RBP9.66□□□□□ -0.86
NCKAP1L-205ENST00000548916 BAZ1BQ9UIG0 1483 aaKnown RBP9.66□□□□□ -0.86
NCKAP1L-205ENST00000548916 KIF21AQ7Z4S6 1674 aa9.65□□□□□ -0.86
NCKAP1L-205ENST00000548916 PPP1R26Q5T8A7 1209 aaPredicted RBP9.65□□□□□ -0.86
NCKAP1L-205ENST00000548916 TRMT44Q8IYL2 757 aaKnown RBP9.65□□□□□ -0.86
NCKAP1L-205ENST00000548916 MAFBQ9Y5Q3 323 aaPredicted RBP9.65□□□□□ -0.86
NCKAP1L-205ENST00000548916 ZEB1P37275 1124 aaPredicted RBP9.64□□□□□ -0.87
NCKAP1L-205ENST00000548916 TBC1D9Q6ZT07 1266 aa9.64□□□□□ -0.87
NCKAP1L-205ENST00000548916 INSM2Q96T92 566 aaPredicted RBP9.64□□□□□ -0.87
NCKAP1L-205ENST00000548916 USTQ9Y2C2 406 aa9.64□□□□□ -0.87
NCKAP1L-205ENST00000548916 GPSM3Q9Y4H4 160 aa9.64□□□□□ -0.87
NCKAP1L-205ENST00000548916 ATP9BO43861 1147 aa9.63□□□□□ -0.87
NCKAP1L-205ENST00000548916 NFATC2IPQ8NCF5 419 aa9.63□□□□□ -0.87
NCKAP1L-205ENST00000548916 ARMC2Q8NEN0 867 aa9.63□□□□□ -0.87
NCKAP1L-205ENST00000548916 RNF217Q8TC41 542 aa9.63□□□□□ -0.87
NCKAP1L-205ENST00000548916 GPKOWQ92917 476 aaPredicted RBP eCLIP9.63□□□□□ -0.87
NCKAP1L-205ENST00000548916 KRTAP9-9Q9BYP9 154 aa9.63□□□□□ -0.87
NCKAP1L-205ENST00000548916 KRTAP9-4Q9BYQ2 154 aa9.63□□□□□ -0.87
NCKAP1L-205ENST00000548916 MROH2BQ7Z745 1585 aa9.63□□□□□ -0.87
NCKAP1L-205ENST00000548916 ZMYM1Q5SVZ6 1142 aa9.62□□□□□ -0.87
NCKAP1L-205ENST00000548916 PDXDC2PQ6P474 469 aa9.62□□□□□ -0.87
NCKAP1L-205ENST00000548916 ACDQ96AP0 544 aa9.62□□□□□ -0.87
NCKAP1L-205ENST00000548916 GMCL1Q96IK5 515 aa9.62□□□□□ -0.87
NCKAP1L-205ENST00000548916 MKL2Q9ULH7 1088 aa9.62□□□□□ -0.87
NCKAP1L-205ENST00000548916 ATG7O95352 703 aa9.61□□□□□ -0.87
NCKAP1L-205ENST00000548916 CSB-PGBD3P0DP91 1061 aa9.61□□□□□ -0.87
NCKAP1L-205ENST00000548916 RELBQ01201 579 aa9.61□□□□□ -0.87
NCKAP1L-205ENST00000548916 PTK2Q05397 1052 aa9.6□□□□□ -0.87
NCKAP1L-205ENST00000548916 AEBP1Q8IUX7 1158 aa9.6□□□□□ -0.87
NCKAP1L-205ENST00000548916 CUEDC1Q9NWM3 386 aaPredicted RBP9.6□□□□□ -0.87
NCKAP1L-205ENST00000548916 KRTAP4-8A0A0G2JLE6 195 aa9.59□□□□□ -0.87
NCKAP1L-205ENST00000548916 MAGEB6P1A0A0J9YX57 407 aa9.59□□□□□ -0.87
NCKAP1L-205ENST00000548916 MCCD1P59942 119 aaPredicted RBP9.59□□□□□ -0.87
NCKAP1L-205ENST00000548916 NBPF14Q5TI25 921 aa9.59□□□□□ -0.87
NCKAP1L-205ENST00000548916 ZNF592Q92610 1267 aa9.59□□□□□ -0.87
NCKAP1L-205ENST00000548916 OCSTAMPQ9BR26 566 aa9.59□□□□□ -0.87
NCKAP1L-205ENST00000548916 NSFL1CQ9UNZ2 370 aaKnown RBP9.59□□□□□ -0.87
NCKAP1L-205ENST00000548916 ZNF837Q96EG3 531 aaPredicted RBP9.58□□□□□ -0.88
NCKAP1L-205ENST00000548916 AGBL1Q96MI9 1066 aa9.58□□□□□ -0.88
NCKAP1L-205ENST00000548916 BAZ1AQ9NRL2 1556 aaPredicted RBP9.58□□□□□ -0.88
NCKAP1L-205ENST00000548916 SCO2A0A1W2PP80 73 aa9.57□□□□□ -0.88
NCKAP1L-205ENST00000548916 GPR25O00155 361 aa9.57□□□□□ -0.88
NCKAP1L-205ENST00000548916 PIK3CDO00329 1044 aa9.57□□□□□ -0.88
NCKAP1L-205ENST00000548916 OIP5O43482 229 aa9.57□□□□□ -0.88
NCKAP1L-205ENST00000548916 SNRPNP63162 240 aaKnown RBP9.57□□□□□ -0.88
NCKAP1L-205ENST00000548916 KANK4Q5T7N3 995 aaPredicted RBP9.57□□□□□ -0.88
NCKAP1L-205ENST00000548916 LAMC3Q9Y6N6 1575 aa9.57□□□□□ -0.88
NCKAP1L-205ENST00000548916 PEG3Q9GZU2 1588 aa9.56□□□□□ -0.88
NCKAP1L-205ENST00000548916 BRD1O95696 1058 aa9.56□□□□□ -0.88
NCKAP1L-205ENST00000548916 DHX9Q08211 1270 aaKnown RBP9.56□□□□□ -0.88
NCKAP1L-205ENST00000548916 PLEKHM2Q8IWE5 1019 aa9.56□□□□□ -0.88
NCKAP1L-205ENST00000548916 VRTNQ9H8Y1 702 aa9.56□□□□□ -0.88
NCKAP1L-205ENST00000548916 CEP126Q9P2H0 1117 aa9.56□□□□□ -0.88
NCKAP1L-205ENST00000548916 CCDC9Q9Y3X0 531 aaKnown RBP9.56□□□□□ -0.88
NCKAP1L-205ENST00000548916 PATL2C9JE40 543 aaKnown RBP9.55□□□□□ -0.88
NCKAP1L-205ENST00000548916 CDCA8Q53HL2 280 aa9.55□□□□□ -0.88
NCKAP1L-205ENST00000548916 TRIM22Q8IYM9 498 aa9.55□□□□□ -0.88
NCKAP1L-205ENST00000548916 TRERF1Q96PN7 1200 aa9.55□□□□□ -0.88
NCKAP1L-205ENST00000548916 SEMA6BQ9H3T3 888 aa9.55□□□□□ -0.88
NCKAP1L-205ENST00000548916 COL8A1P27658 744 aa9.54□□□□□ -0.88
NCKAP1L-205ENST00000548916 ELOAQ14241 798 aaKnown RBP9.54□□□□□ -0.88
NCKAP1L-205ENST00000548916 LYSMD3Q7Z3D4 306 aa9.54□□□□□ -0.88
NCKAP1L-205ENST00000548916 PHTF2Q8N3S3 785 aa9.54□□□□□ -0.88
NCKAP1L-205ENST00000548916 USP17L3A6NCW0 530 aa9.53□□□□□ -0.88
NCKAP1L-205ENST00000548916 USP17L4A6NCW7 530 aa9.53□□□□□ -0.88
NCKAP1L-205ENST00000548916 TMEM88BA6NKF7 163 aa9.53□□□□□ -0.88
NCKAP1L-205ENST00000548916 USP17L5A8MUK1 530 aa9.53□□□□□ -0.88
NCKAP1L-205ENST00000548916 SKIP12755 728 aa9.53□□□□□ -0.88
NCKAP1L-205ENST00000548916 MX2P20592 715 aa9.53□□□□□ -0.88
NCKAP1L-205ENST00000548916 GRIN2CQ14957 1233 aa9.53□□□□□ -0.88
NCKAP1L-205ENST00000548916 USP17L2Q6R6M4 530 aa9.53□□□□□ -0.88
NCKAP1L-205ENST00000548916 SH3BP5LQ7L8J4 393 aa9.53□□□□□ -0.88
NCKAP1L-205ENST00000548916 USP17L1Q7RTZ2 530 aa9.53□□□□□ -0.88
NCKAP1L-205ENST00000548916 CARD14Q9BXL6 1004 aa9.53□□□□□ -0.88
NCKAP1L-205ENST00000548916 ITGB7P26010 798 aa9.52□□□□□ -0.89
NCKAP1L-205ENST00000548916 KCNA1Q09470 495 aa9.52□□□□□ -0.89
NCKAP1L-205ENST00000548916 ADAM32Q8TC27 787 aa9.52□□□□□ -0.89
NCKAP1L-205ENST00000548916 ARHGAP9Q9BRR9 750 aa9.52□□□□□ -0.89
NCKAP1L-205ENST00000548916 ZNF395Q9H8N7 513 aaPredicted RBP9.52□□□□□ -0.89
NCKAP1L-205ENST00000548916 PDS5BQ9NTI5 1447 aa9.52□□□□□ -0.89
NCKAP1L-205ENST00000548916 CHIC2Q9UKJ5 165 aa9.52□□□□□ -0.89
NCKAP1L-205ENST00000548916 PCDHB9Q9Y5E1 797 aa9.52□□□□□ -0.89
NCKAP1L-205ENST00000548916 LZTS3O60299 673 aaPredicted RBP9.51□□□□□ -0.89
NCKAP1L-205ENST00000548916 SLFNL1Q499Z3 407 aa9.51□□□□□ -0.89
NCKAP1L-205ENST00000548916 RRAGCQ9HB90 399 aa9.51□□□□□ -0.89
NCKAP1L-205ENST00000548916 CADPSQ9ULU8 1353 aa9.5□□□□□ -0.89
NCKAP1L-205ENST00000548916 C1QTNF9BB2RNN3 333 aa9.5□□□□□ -0.89
NCKAP1L-205ENST00000548916 PIK3R2O00459 728 aa9.5□□□□□ -0.89
NCKAP1L-205ENST00000548916 FOXD4L5Q5VV16 416 aaPredicted RBP9.5□□□□□ -0.89
NCKAP1L-205ENST00000548916 RIPOR1Q6ZS17 1223 aa9.5□□□□□ -0.89
NCKAP1L-205ENST00000548916 CDV3Q9UKY7 258 aaKnown RBP9.5□□□□□ -0.89
NCKAP1L-205ENST00000548916 MRC2Q9UBG0 1479 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms