RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 ZNF530Q6P9A1 599 aaPredicted RBP27.89■■■□□ 2.06
SSH1-207ENST00000547862 ATG3Q9NT62 314 aa27.89■■■□□ 2.06
SSH1-207ENST00000547862 KDM6AO15550 1401 aaPredicted RBP27.88■■■□□ 2.05
SSH1-207ENST00000547862 KDRP35968 1356 aa27.87■■■□□ 2.05
SSH1-207ENST00000547862 AEBP1Q8IUX7 1158 aa27.87■■■□□ 2.05
SSH1-207ENST00000547862 RBM42Q9BTD8 480 aaKnown RBP27.87■■■□□ 2.05
SSH1-207ENST00000547862 CD2APQ9Y5K6 639 aa27.87■■■□□ 2.05
SSH1-207ENST00000547862 GRIN3BO60391 1043 aa27.86■■■□□ 2.05
SSH1-207ENST00000547862 PLEKHO1Q53GL0 409 aaPredicted RBP27.86■■■□□ 2.05
SSH1-207ENST00000547862 PLEKHG2Q9H7P9 1386 aa27.86■■■□□ 2.05
SSH1-207ENST00000547862 ZNF831Q5JPB2 1677 aa27.85■■■□□ 2.05
SSH1-207ENST00000547862 KNSTRNQ9Y448 316 aa27.85■■■□□ 2.05
SSH1-207ENST00000547862 VIRMAQ69YN4 1812 aaKnown RBP27.85■■■□□ 2.05
SSH1-207ENST00000547862 C4AP0C0L4 1744 aa27.84■■■□□ 2.05
SSH1-207ENST00000547862 SENP3-EIF4A1A0A087X0R7 540 aa27.83■■■□□ 2.05
SSH1-207ENST00000547862 HSP90AB1P08238 724 aaKnown RBP27.83■■■□□ 2.05
SSH1-207ENST00000547862 SCN11AQ9UI33 1791 aa27.83■■■□□ 2.05
SSH1-207ENST00000547862 GIGYF1O75420 1035 aaPredicted RBP27.82■■■□□ 2.04
SSH1-207ENST00000547862 DCAF5Q96JK2 942 aa27.82■■■□□ 2.04
SSH1-207ENST00000547862 CICQ96RK0 1608 aaPredicted RBP27.81■■■□□ 2.04
SSH1-207ENST00000547862 CABP4P57796 275 aa27.81■■■□□ 2.04
SSH1-207ENST00000547862 C1QTNF8P60827 252 aa27.81■■■□□ 2.04
SSH1-207ENST00000547862 C1orf141Q5JVX7 400 aa27.81■■■□□ 2.04
SSH1-207ENST00000547862 N4BP2Q86UW6 1770 aaPredicted RBP27.81■■■□□ 2.04
SSH1-207ENST00000547862 ERVV-2B6SEH9 535 aa27.8■■■□□ 2.04
SSH1-207ENST00000547862 MYH14Q7Z406 1995 aaKnown RBP27.79■■■□□ 2.04
SSH1-207ENST00000547862 TJP1Q07157 1748 aa27.79■■■□□ 2.04
SSH1-207ENST00000547862 AMOTQ4VCS5 1084 aa27.79■■■□□ 2.04
SSH1-207ENST00000547862 SULT6B1Q6IMI4 303 aa27.79■■■□□ 2.04
SSH1-207ENST00000547862 SLC4A9Q96Q91 983 aa27.79■■■□□ 2.04
SSH1-207ENST00000547862 RTCBQ9Y3I0 505 aaKnown RBP27.78■■■□□ 2.04
SSH1-207ENST00000547862 KIF13BQ9NQT8 1826 aa27.78■■■□□ 2.04
SSH1-207ENST00000547862 ATP10DQ9P241 1426 aa27.77■■■□□ 2.04
SSH1-207ENST00000547862 MTHFSP49914 203 aa27.77■■■□□ 2.04
SSH1-207ENST00000547862 KIAA1551Q9HCM1 1747 aa27.77■■■□□ 2.04
SSH1-207ENST00000547862 KIF7Q2M1P5 1343 aa27.76■■■□□ 2.03
SSH1-207ENST00000547862 MMP10P09238 476 aa27.76■■■□□ 2.03
SSH1-207ENST00000547862 PTCD1O75127 700 aaKnown RBP27.74■■■□□ 2.03
SSH1-207ENST00000547862 TRAPPC3LQ5T215 181 aa27.73■■■□□ 2.03
SSH1-207ENST00000547862 CNTNAP4Q9C0A0 1308 aa27.72■■■□□ 2.03
SSH1-207ENST00000547862 IL13P35225 146 aa27.72■■■□□ 2.03
SSH1-207ENST00000547862 AMER1Q5JTC6 1135 aaPredicted RBP27.71■■■□□ 2.03
SSH1-207ENST00000547862 ZNF526Q8TF50 670 aaPredicted RBP27.71■■■□□ 2.03
SSH1-207ENST00000547862 PXDNLA1KZ92 1463 aa27.7■■■□□ 2.03
SSH1-207ENST00000547862 CNGB1Q14028 1251 aaPredicted RBP27.7■■■□□ 2.02
SSH1-207ENST00000547862 NFATC2IPQ8NCF5 419 aa27.69■■■□□ 2.02
SSH1-207ENST00000547862 ARHGEF1Q92888 912 aaKnown RBP27.69■■■□□ 2.02
SSH1-207ENST00000547862 HMOX1P09601 288 aa27.68■■■□□ 2.02
SSH1-207ENST00000547862 RFC4P35249 363 aa27.68■■■□□ 2.02
SSH1-207ENST00000547862 CC2D1BQ5T0F9 858 aaKnown RBP27.68■■■□□ 2.02
SSH1-207ENST00000547862 C10orf71Q711Q0 1435 aa27.67■■■□□ 2.02
SSH1-207ENST00000547862 RC3H1Q5TC82 1133 aaKnown RBP27.67■■■□□ 2.02
SSH1-207ENST00000547862 ADCY9O60503 1353 aa27.66■■■□□ 2.02
SSH1-207ENST00000547862 RPS6KA4O75676 772 aa27.66■■■□□ 2.02
SSH1-207ENST00000547862 ADRA2BP18089 450 aa27.66■■■□□ 2.02
SSH1-207ENST00000547862 CRKLP46109 303 aaKnown RBP27.66■■■□□ 2.02
SSH1-207ENST00000547862 BRCA1P38398 1863 aaKnown RBP27.66■■■□□ 2.02
SSH1-207ENST00000547862 GYS1P13807 737 aa27.65■■■□□ 2.02
SSH1-207ENST00000547862 NLGN1Q8N2Q7 840 aa27.65■■■□□ 2.02
SSH1-207ENST00000547862 GPBP1L1Q9HC44 474 aaPredicted RBP27.64■■■□□ 2.02
SSH1-207ENST00000547862 SRP68Q9UHB9 627 aaKnown RBP27.63■■■□□ 2.01
SSH1-207ENST00000547862 MRC1P22897 1456 aa27.63■■■□□ 2.01
SSH1-207ENST00000547862 AKAP4Q5JQC9 854 aa27.62■■■□□ 2.01
SSH1-207ENST00000547862 CCDC87Q9NVE4 849 aa27.62■■■□□ 2.01
SSH1-207ENST00000547862 BCS1LQ9Y276 419 aa27.62■■■□□ 2.01
SSH1-207ENST00000547862 PARP3Q9Y6F1 533 aa27.62■■■□□ 2.01
SSH1-207ENST00000547862 A0A0G2JLW4 131 aa27.61■■■□□ 2.01
SSH1-207ENST00000547862 ADAMTS7Q9UKP4 1686 aa27.61■■■□□ 2.01
SSH1-207ENST00000547862 LGR6Q9HBX8 967 aa27.6■■■□□ 2.01
SSH1-207ENST00000547862 SLC52A2Q9HAB3 445 aa27.59■■■□□ 2.01
SSH1-207ENST00000547862 SLC39A6Q13433 755 aa27.58■■■□□ 2.01
SSH1-207ENST00000547862 KCPQ6ZWJ8 1503 aa27.57■■■□□ 2
SSH1-207ENST00000547862 RNMTO43148 476 aaKnown RBP27.57■■■□□ 2
SSH1-207ENST00000547862 DIAPH1O60610 1272 aaKnown RBP27.57■■■□□ 2
SSH1-207ENST00000547862 DNAJC10Q8IXB1 793 aa27.57■■■□□ 2
SSH1-207ENST00000547862 USP42Q9H9J4 1324 aaKnown RBP27.57■■■□□ 2
SSH1-207ENST00000547862 ARFGEF1Q9Y6D6 1849 aa27.57■■■□□ 2
SSH1-207ENST00000547862 UBR2Q8IWV8 1755 aa27.56■■■□□ 2
SSH1-207ENST00000547862 DPEP1P16444 411 aa27.56■■■□□ 2
SSH1-207ENST00000547862 COL3A1P02461 1466 aaPredicted RBP27.56■■■□□ 2
SSH1-207ENST00000547862 TGFB2P61812 414 aa27.55■■■□□ 2
SSH1-207ENST00000547862 FKBP8Q14318 412 aa27.55■■■□□ 2
SSH1-207ENST00000547862 MTHFSDQ2M296 383 aaKnown RBP27.54■■■□□ 2
SSH1-207ENST00000547862 PER1O15534 1290 aaPredicted RBP27.53■■■□□ 2
SSH1-207ENST00000547862 FCHSD2O94868 740 aa27.53■■■□□ 2
SSH1-207ENST00000547862 INTS5Q6P9B9 1019 aaKnown RBP27.53■■■□□ 2
SSH1-207ENST00000547862 AFDNP55196 1824 aaKnown RBP27.53■■■□□ 2
SSH1-207ENST00000547862 U2SURPO15042 1029 aaKnown RBP27.52■■■□□ 2
SSH1-207ENST00000547862 DDR1Q08345 913 aa27.52■■■□□ 2
SSH1-207ENST00000547862 ARHGAP27Q6ZUM4 889 aa27.51■■□□□ 1.99
SSH1-207ENST00000547862 SOS1Q07889 1333 aaPredicted RBP27.49■■□□□ 1.99
SSH1-207ENST00000547862 USPL1Q5W0Q7 1092 aa27.49■■□□□ 1.99
SSH1-207ENST00000547862 SIPA1L3O60292 1781 aaPredicted RBP27.49■■□□□ 1.99
SSH1-207ENST00000547862 COL15A1P39059 1388 aa27.48■■□□□ 1.99
SSH1-207ENST00000547862 ZPR1O75312 459 aa27.48■■□□□ 1.99
SSH1-207ENST00000547862 ZBTB1Q9Y2K1 713 aa27.47■■□□□ 1.99
SSH1-207ENST00000547862 CYP19A1P11511 503 aaPredicted RBP27.46■■□□□ 1.99
SSH1-207ENST00000547862 CHRNA5P30532 468 aa27.45■■□□□ 1.98
SSH1-207ENST00000547862 POLRMTO00411 1230 aaKnown RBP27.44■■□□□ 1.98
SSH1-207ENST00000547862 TTC5Q8N0Z6 440 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms