RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 PCMTD1Q96MG8 357 aaPredicted RBP6.13□□□□□ -1.43
DEPDC4-204ENST00000547823 ARHGEF10LQ9HCE6 1279 aa6.13□□□□□ -1.43
DEPDC4-204ENST00000547823 NOP53Q9NZM5 478 aaKnown RBP6.13□□□□□ -1.43
DEPDC4-204ENST00000547823 ATXN7L1Q9ULK2 861 aaPredicted RBP6.13□□□□□ -1.43
DEPDC4-204ENST00000547823 MYCP01106 439 aaPredicted RBP6.12□□□□□ -1.43
DEPDC4-204ENST00000547823 ESCO1Q5FWF5 840 aa6.12□□□□□ -1.43
DEPDC4-204ENST00000547823 EFHC2Q5JST6 749 aa6.12□□□□□ -1.43
DEPDC4-204ENST00000547823 SLCO4C1Q6ZQN7 724 aa6.12□□□□□ -1.43
DEPDC4-204ENST00000547823 ESYT1Q9BSJ8 1104 aa6.12□□□□□ -1.43
DEPDC4-204ENST00000547823 RRAGCQ9HB90 399 aa6.12□□□□□ -1.43
DEPDC4-204ENST00000547823 PCDHB11Q9Y5F2 797 aa6.12□□□□□ -1.43
DEPDC4-204ENST00000547823 EDARADDQ8WWZ3 215 aa6.11□□□□□ -1.43
DEPDC4-204ENST00000547823 KLRG1Q96E93 195 aa6.11□□□□□ -1.43
DEPDC4-204ENST00000547823 OSBPL3Q9H4L5 887 aa6.11□□□□□ -1.43
DEPDC4-204ENST00000547823 KRBA1A5PL33 1030 aa6.1□□□□□ -1.43
DEPDC4-204ENST00000547823 GNB5O14775 395 aa6.1□□□□□ -1.43
DEPDC4-204ENST00000547823 SNRPNP63162 240 aaKnown RBP6.1□□□□□ -1.43
DEPDC4-204ENST00000547823 FIGNL1Q6PIW4 674 aa6.1□□□□□ -1.43
DEPDC4-204ENST00000547823 CNKSR1Q969H4 720 aa6.1□□□□□ -1.43
DEPDC4-204ENST00000547823 ZSCAN10Q96SZ4 725 aaPredicted RBP6.1□□□□□ -1.43
DEPDC4-204ENST00000547823 GPBP1L1Q9HC44 474 aaPredicted RBP6.1□□□□□ -1.43
DEPDC4-204ENST00000547823 SHISA8B8ZZ34 492 aa6.09□□□□□ -1.43
DEPDC4-204ENST00000547823 BMP4P12644 408 aa6.09□□□□□ -1.43
DEPDC4-204ENST00000547823 AMPD1P23109 780 aa6.09□□□□□ -1.43
DEPDC4-204ENST00000547823 SCTRP47872 440 aa6.09□□□□□ -1.43
DEPDC4-204ENST00000547823 CENPCQ03188 943 aa6.08□□□□□ -1.44
DEPDC4-204ENST00000547823 TMEM214Q6NUQ4 689 aaKnown RBP6.08□□□□□ -1.44
DEPDC4-204ENST00000547823 Q8N3U1 123 aa6.08□□□□□ -1.44
DEPDC4-204ENST00000547823 GJD4Q96KN9 370 aaPredicted RBP6.08□□□□□ -1.44
DEPDC4-204ENST00000547823 GPAMQ9HCL2 828 aa6.08□□□□□ -1.44
DEPDC4-204ENST00000547823 ARAFP10398 606 aa6.07□□□□□ -1.44
DEPDC4-204ENST00000547823 GRIN2CQ14957 1233 aa6.07□□□□□ -1.44
DEPDC4-204ENST00000547823 C1orf216Q8TAB5 229 aa6.07□□□□□ -1.44
DEPDC4-204ENST00000547823 XAGE2Q96GT9 111 aa6.07□□□□□ -1.44
DEPDC4-204ENST00000547823 CRISPLD1Q9H336 500 aa6.07□□□□□ -1.44
DEPDC4-204ENST00000547823 IL2RAP01589 272 aa6.06□□□□□ -1.44
DEPDC4-204ENST00000547823 FGFR3P22607 806 aa6.06□□□□□ -1.44
DEPDC4-204ENST00000547823 COL8A1P27658 744 aa6.06□□□□□ -1.44
DEPDC4-204ENST00000547823 BANK1Q8NDB2 785 aa6.06□□□□□ -1.44
DEPDC4-204ENST00000547823 RHBDD1Q8TEB9 315 aa6.06□□□□□ -1.44
DEPDC4-204ENST00000547823 AVENQ9NQS1 362 aaPredicted RBP6.06□□□□□ -1.44
DEPDC4-204ENST00000547823 HRH3Q9Y5N1 445 aa6.06□□□□□ -1.44
DEPDC4-204ENST00000547823 NDUFB9Q9Y6M9 179 aa6.06□□□□□ -1.44
DEPDC4-204ENST00000547823 THBS1P07996 1170 aa6.05□□□□□ -1.44
DEPDC4-204ENST00000547823 UBAP2LQ14157 1087 aaKnown RBP6.05□□□□□ -1.44
DEPDC4-204ENST00000547823 LINC00114Q6XXX2 140 aa6.05□□□□□ -1.44
DEPDC4-204ENST00000547823 SIRT1Q96EB6 747 aa6.05□□□□□ -1.44
DEPDC4-204ENST00000547823 FHDC1Q9C0D6 1143 aaPredicted RBP6.05□□□□□ -1.44
DEPDC4-204ENST00000547823 RAB6BQ9NRW1 208 aa6.05□□□□□ -1.44
DEPDC4-204ENST00000547823 GGA1Q9UJY5 639 aa6.05□□□□□ -1.44
DEPDC4-204ENST00000547823 FURINP09958 794 aa6.04□□□□□ -1.44
DEPDC4-204ENST00000547823 EPXP11678 715 aa6.04□□□□□ -1.44
DEPDC4-204ENST00000547823 MSX1P28360 303 aa6.04□□□□□ -1.44
DEPDC4-204ENST00000547823 PHKA2P46019 1235 aa6.04□□□□□ -1.44
DEPDC4-204ENST00000547823 C4orf17Q53FE4 359 aa6.04□□□□□ -1.44
DEPDC4-204ENST00000547823 C1orf229Q6ZS94 237 aaPredicted RBP6.04□□□□□ -1.44
DEPDC4-204ENST00000547823 NLRP8Q86W28 1048 aa6.04□□□□□ -1.44
DEPDC4-204ENST00000547823 NDFIP2Q9NV92 336 aa6.04□□□□□ -1.44
DEPDC4-204ENST00000547823 ADH6P28332 368 aa6.03□□□□□ -1.44
DEPDC4-204ENST00000547823 DGKGP49619 791 aa6.03□□□□□ -1.44
DEPDC4-204ENST00000547823 USP4Q13107 963 aa6.03□□□□□ -1.44
DEPDC4-204ENST00000547823 FAM182BQ5T319 152 aa6.03□□□□□ -1.44
DEPDC4-204ENST00000547823 TBC1D9Q6ZT07 1266 aa6.03□□□□□ -1.44
DEPDC4-204ENST00000547823 PPARGC1BQ86YN6 1023 aaKnown RBP6.03□□□□□ -1.44
DEPDC4-204ENST00000547823 RNF135Q8IUD6 432 aa6.03□□□□□ -1.44
DEPDC4-204ENST00000547823 BTBD6Q96KE9 485 aa6.03□□□□□ -1.44
DEPDC4-204ENST00000547823 RUBCNLQ9H714 662 aa6.03□□□□□ -1.44
DEPDC4-204ENST00000547823 C1QTNF9BB2RNN3 333 aa6.02□□□□□ -1.45
DEPDC4-204ENST00000547823 ABHD17AQ96GS6 310 aa6.02□□□□□ -1.45
DEPDC4-204ENST00000547823 PCDHGC4Q9Y5F7 938 aa6.02□□□□□ -1.45
DEPDC4-204ENST00000547823 SPDYE3A6NKU9 549 aa6.01□□□□□ -1.45
DEPDC4-204ENST00000547823 HOXB4P17483 251 aaPredicted RBP6.01□□□□□ -1.45
DEPDC4-204ENST00000547823 TLR1Q15399 786 aa6.01□□□□□ -1.45
DEPDC4-204ENST00000547823 CD163Q86VB7 1156 aa6.01□□□□□ -1.45
DEPDC4-204ENST00000547823 KRTAP4-8Q9BYQ9 185 aa6.01□□□□□ -1.45
DEPDC4-204ENST00000547823 PRM3Q9NNZ6 103 aa6.01□□□□□ -1.45
DEPDC4-204ENST00000547823 CEP126Q9P2H0 1117 aa6.01□□□□□ -1.45
DEPDC4-204ENST00000547823 C2CD2LO14523 706 aa6□□□□□ -1.45
DEPDC4-204ENST00000547823 BNIP3LO60238 219 aa6□□□□□ -1.45
DEPDC4-204ENST00000547823 EIF4G2P78344 907 aaKnown RBP eCLIP6□□□□□ -1.45
DEPDC4-204ENST00000547823 CHSY3Q70JA7 882 aa6□□□□□ -1.45
DEPDC4-204ENST00000547823 SUV39H2Q9H5I1 410 aa6□□□□□ -1.45
DEPDC4-204ENST00000547823 DOLKQ9UPQ8 538 aa6□□□□□ -1.45
DEPDC4-204ENST00000547823 SPATA31C1P0DKV0 1188 aa5.99□□□□□ -1.45
DEPDC4-204ENST00000547823 CTBSQ01459 385 aa5.99□□□□□ -1.45
DEPDC4-204ENST00000547823 NBPF1Q3BBV0 1214 aa5.99□□□□□ -1.45
DEPDC4-204ENST00000547823 CCDC85AQ96PX6 553 aaPredicted RBP5.99□□□□□ -1.45
DEPDC4-204ENST00000547823 NIFKQ9BYG3 293 aaKnown RBP5.99□□□□□ -1.45
DEPDC4-204ENST00000547823 NEURL1BA8MQ27 555 aa5.98□□□□□ -1.45
DEPDC4-204ENST00000547823 ATXN7O15265 892 aaPredicted RBP5.98□□□□□ -1.45
DEPDC4-204ENST00000547823 PLA2G4AP47712 749 aa5.98□□□□□ -1.45
DEPDC4-204ENST00000547823 SLFNL1Q499Z3 407 aa5.98□□□□□ -1.45
DEPDC4-204ENST00000547823 PSMG3-AS1Q96PY0 264 aa5.98□□□□□ -1.45
DEPDC4-204ENST00000547823 TATP17735 454 aaPredicted RBP5.97□□□□□ -1.45
DEPDC4-204ENST00000547823 CHRNA4P43681 627 aa5.97□□□□□ -1.45
DEPDC4-204ENST00000547823 GATA4P43694 442 aa5.97□□□□□ -1.45
DEPDC4-204ENST00000547823 LAMC2Q13753 1193 aa5.97□□□□□ -1.45
DEPDC4-204ENST00000547823 MTMR14Q8NCE2 650 aa5.97□□□□□ -1.45
DEPDC4-204ENST00000547823 ZCCHC2Q9C0B9 1178 aaKnown RBP5.97□□□□□ -1.45
DEPDC4-204ENST00000547823 ETNK1Q9HBU6 452 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms