RNA–Protein interactions for RNA: ENST00000547290.1

DDX23-204, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-204ENST00000547290 UBR2Q8IWV8 1755 aa12.33□□□□□ -0.44
DDX23-204ENST00000547290 LOC102724428A0A0B4J2F2 783 aa12.32□□□□□ -0.44
DDX23-204ENST00000547290 KIF3CO14782 793 aa12.32□□□□□ -0.44
DDX23-204ENST00000547290 SIK1P57059 783 aa12.32□□□□□ -0.44
DDX23-204ENST00000547290 TMF1P82094 1093 aa12.32□□□□□ -0.44
DDX23-204ENST00000547290 ASAP1Q9ULH1 1129 aa12.32□□□□□ -0.44
DDX23-204ENST00000547290 WASHC2AQ641Q2 1341 aa12.32□□□□□ -0.44
DDX23-204ENST00000547290 TIAM2Q8IVF5 1701 aa12.31□□□□□ -0.44
DDX23-204ENST00000547290 PHF14O94880 888 aa12.31□□□□□ -0.44
DDX23-204ENST00000547290 HSPA6P17066 643 aa12.31□□□□□ -0.44
DDX23-204ENST00000547290 SMARCC1Q92922 1105 aaPredicted RBP12.31□□□□□ -0.44
DDX23-204ENST00000547290 AK7Q96M32 723 aa12.31□□□□□ -0.44
DDX23-204ENST00000547290 EYA1Q99502 592 aa12.31□□□□□ -0.44
DDX23-204ENST00000547290 CCDC88AQ3V6T2 1871 aa12.3□□□□□ -0.44
DDX23-204ENST00000547290 SLC24A1O60721 1099 aa12.3□□□□□ -0.44
DDX23-204ENST00000547290 PHKG2P15735 406 aa12.3□□□□□ -0.44
DDX23-204ENST00000547290 WWC3Q9ULE0 1092 aa12.3□□□□□ -0.44
DDX23-204ENST00000547290 MRC1P22897 1456 aa12.29□□□□□ -0.44
DDX23-204ENST00000547290 GPBP1L1Q9HC44 474 aaPredicted RBP12.29□□□□□ -0.44
DDX23-204ENST00000547290 ATG3Q9NT62 314 aa12.29□□□□□ -0.44
DDX23-204ENST00000547290 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.29□□□□□ -0.44
DDX23-204ENST00000547290 SIPA1L3O60292 1781 aaPredicted RBP12.28□□□□□ -0.44
DDX23-204ENST00000547290 ANKRD31Q8N7Z5 1873 aa12.28□□□□□ -0.44
DDX23-204ENST00000547290 ZNF526Q8TF50 670 aaPredicted RBP12.28□□□□□ -0.44
DDX23-204ENST00000547290 POLKQ9UBT6 870 aa12.28□□□□□ -0.44
DDX23-204ENST00000547290 PCNTO95613 3336 aa12.27□□□□□ -0.44
DDX23-204ENST00000547290 GNPATO15228 680 aa12.27□□□□□ -0.45
DDX23-204ENST00000547290 EIF4A2Q14240 407 aaKnown RBP12.27□□□□□ -0.45
DDX23-204ENST00000547290 COL11A2P13942 1736 aaPredicted RBP12.27□□□□□ -0.45
DDX23-204ENST00000547290 SCN7AQ01118 1682 aa12.26□□□□□ -0.45
DDX23-204ENST00000547290 MMP10P09238 476 aa12.26□□□□□ -0.45
DDX23-204ENST00000547290 TMOD3Q9NYL9 352 aa12.26□□□□□ -0.45
DDX23-204ENST00000547290 SPG7Q9UQ90 795 aa12.26□□□□□ -0.45
DDX23-204ENST00000547290 KCPQ6ZWJ8 1503 aa12.26□□□□□ -0.45
DDX23-204ENST00000547290 KCNA3P22001 575 aa12.25□□□□□ -0.45
DDX23-204ENST00000547290 CNTNAP4Q9C0A0 1308 aa12.25□□□□□ -0.45
DDX23-204ENST00000547290 DICER1Q9UPY3 1922 aaKnown RBP12.25□□□□□ -0.45
DDX23-204ENST00000547290 GYS1P13807 737 aa12.24□□□□□ -0.45
DDX23-204ENST00000547290 ATP6V1AP38606 617 aa12.24□□□□□ -0.45
DDX23-204ENST00000547290 IFNL2Q8IZJ0 200 aa12.24□□□□□ -0.45
DDX23-204ENST00000547290 ARFGEF2Q9Y6D5 1785 aa12.24□□□□□ -0.45
DDX23-204ENST00000547290 CACNA1SQ13698 1873 aa12.23□□□□□ -0.45
DDX23-204ENST00000547290 HMGB2P26583 209 aaKnown RBP12.23□□□□□ -0.45
DDX23-204ENST00000547290 DNAJC5GQ8N7S2 189 aa12.23□□□□□ -0.45
DDX23-204ENST00000547290 BCORQ6W2J9 1755 aa12.23□□□□□ -0.45
DDX23-204ENST00000547290 CDCA8Q53HL2 280 aa12.22□□□□□ -0.45
DDX23-204ENST00000547290 ARHGEF1Q92888 912 aaKnown RBP12.22□□□□□ -0.45
DDX23-204ENST00000547290 FER1L6Q2WGJ9 1857 aa12.22□□□□□ -0.45
DDX23-204ENST00000547290 PPM1GO15355 546 aaPredicted RBP12.21□□□□□ -0.45
DDX23-204ENST00000547290 TGFB2P61812 414 aa12.21□□□□□ -0.45
DDX23-204ENST00000547290 RC3H1Q5TC82 1133 aaKnown RBP12.21□□□□□ -0.45
DDX23-204ENST00000547290 A0A0G2JLW4 131 aa12.2□□□□□ -0.46
DDX23-204ENST00000547290 ERVV-2B6SEH9 535 aa12.2□□□□□ -0.46
DDX23-204ENST00000547290 DPEP1P16444 411 aa12.2□□□□□ -0.46
DDX23-204ENST00000547290 ADRA2BP18089 450 aa12.2□□□□□ -0.46
DDX23-204ENST00000547290 DDR1Q08345 913 aa12.2□□□□□ -0.46
DDX23-204ENST00000547290 NMRK2Q9NPI5 230 aa12.2□□□□□ -0.46
DDX23-204ENST00000547290 USP42Q9H9J4 1324 aaKnown RBP12.19□□□□□ -0.46
DDX23-204ENST00000547290 RPS6KA4O75676 772 aa12.19□□□□□ -0.46
DDX23-204ENST00000547290 AEBP1Q8IUX7 1158 aa12.19□□□□□ -0.46
DDX23-204ENST00000547290 DCAF5Q96JK2 942 aa12.19□□□□□ -0.46
DDX23-204ENST00000547290 RTCBQ9Y3I0 505 aaKnown RBP12.19□□□□□ -0.46
DDX23-204ENST00000547290 BCS1LQ9Y276 419 aa12.18□□□□□ -0.46
DDX23-204ENST00000547290 TOMM70O94826 608 aa12.17□□□□□ -0.46
DDX23-204ENST00000547290 TRAPPC3LQ5T215 181 aa12.17□□□□□ -0.46
DDX23-204ENST00000547290 NLGN1Q8N2Q7 840 aa12.17□□□□□ -0.46
DDX23-204ENST00000547290 SRP68Q9UHB9 627 aaKnown RBP12.17□□□□□ -0.46
DDX23-204ENST00000547290 COL3A1P02461 1466 aaPredicted RBP12.16□□□□□ -0.46
DDX23-204ENST00000547290 CRKLP46109 303 aaKnown RBP12.16□□□□□ -0.46
DDX23-204ENST00000547290 APLP1P51693 650 aa12.16□□□□□ -0.46
DDX23-204ENST00000547290 PRELPP51888 382 aa12.16□□□□□ -0.46
DDX23-204ENST00000547290 FKBP8Q14318 412 aa12.16□□□□□ -0.46
DDX23-204ENST00000547290 POLRMTO00411 1230 aaKnown RBP12.15□□□□□ -0.46
DDX23-204ENST00000547290 TNNT2P45379 298 aaPredicted RBP12.15□□□□□ -0.46
DDX23-204ENST00000547290 ZNF530Q6P9A1 599 aaPredicted RBP12.15□□□□□ -0.46
DDX23-204ENST00000547290 INTS5Q6P9B9 1019 aaKnown RBP12.15□□□□□ -0.46
DDX23-204ENST00000547290 RBM42Q9BTD8 480 aaKnown RBP12.15□□□□□ -0.46
DDX23-204ENST00000547290 CCDC87Q9NVE4 849 aa12.15□□□□□ -0.46
DDX23-204ENST00000547290 CARMIL3Q8ND23 1372 aa12.15□□□□□ -0.46
DDX23-204ENST00000547290 HTRA3P83110 453 aa12.14□□□□□ -0.47
DDX23-204ENST00000547290 C9orf131Q5VYM1 1079 aa12.14□□□□□ -0.47
DDX23-204ENST00000547290 RBM46Q8TBY0 533 aaKnown RBP12.14□□□□□ -0.47
DDX23-204ENST00000547290 SOS1Q07889 1333 aaPredicted RBP12.13□□□□□ -0.47
DDX23-204ENST00000547290 FCHSD2O94868 740 aa12.13□□□□□ -0.47
DDX23-204ENST00000547290 HSP90AB1P08238 724 aaKnown RBP12.13□□□□□ -0.47
DDX23-204ENST00000547290 TM4SF1P30408 202 aa12.13□□□□□ -0.47
DDX23-204ENST00000547290 JMYQ8N9B5 988 aa12.13□□□□□ -0.47
DDX23-204ENST00000547290 SLX4Q8IY92 1834 aa12.12□□□□□ -0.47
DDX23-204ENST00000547290 PTCD1O75127 700 aaKnown RBP12.12□□□□□ -0.47
DDX23-204ENST00000547290 CHRNA5P30532 468 aa12.12□□□□□ -0.47
DDX23-204ENST00000547290 IL13P35225 146 aa12.12□□□□□ -0.47
DDX23-204ENST00000547290 RFC4P35249 363 aa12.12□□□□□ -0.47
DDX23-204ENST00000547290 ARHGAP27Q6ZUM4 889 aa12.12□□□□□ -0.47
DDX23-204ENST00000547290 BCL2L12Q9HB09 334 aa12.12□□□□□ -0.47
DDX23-204ENST00000547290 PARP3Q9Y6F1 533 aa12.12□□□□□ -0.47
DDX23-204ENST00000547290 COL15A1P39059 1388 aa12.12□□□□□ -0.47
DDX23-204ENST00000547290 ADAMTSL1Q8N6G6 1762 aa12.11□□□□□ -0.47
DDX23-204ENST00000547290 CABP4P57796 275 aa12.11□□□□□ -0.47
DDX23-204ENST00000547290 AMOTQ4VCS5 1084 aa12.11□□□□□ -0.47
DDX23-204ENST00000547290 PLEKHO1Q53GL0 409 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms