RNA–Protein interactions for RNA: ENST00000546125.1

KNTC1-215, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 624 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-215ENST00000546125 PCDHGA11Q9Y5H2 935 aa5.04□□□□□ -1.6
KNTC1-215ENST00000546125 SPATA31C2B4DYI2 1134 aa5.03□□□□□ -1.6
KNTC1-215ENST00000546125 WASLO00401 505 aaPredicted RBP5.03□□□□□ -1.6
KNTC1-215ENST00000546125 INHAP05111 366 aa5.03□□□□□ -1.6
KNTC1-215ENST00000546125 SCNN1DP51172 638 aa5.03□□□□□ -1.6
KNTC1-215ENST00000546125 TLR1Q15399 786 aa5.03□□□□□ -1.6
KNTC1-215ENST00000546125 SV2AQ7L0J3 742 aa5.03□□□□□ -1.6
KNTC1-215ENST00000546125 TIMMDC1Q9NPL8 285 aa5.03□□□□□ -1.6
KNTC1-215ENST00000546125 CUEDC1Q9NWM3 386 aaPredicted RBP5.03□□□□□ -1.6
KNTC1-215ENST00000546125 HRH3Q9Y5N1 445 aa5.03□□□□□ -1.6
KNTC1-215ENST00000546125 USP17L3A6NCW0 530 aa5.02□□□□□ -1.61
KNTC1-215ENST00000546125 USP17L4A6NCW7 530 aa5.02□□□□□ -1.61
KNTC1-215ENST00000546125 TMEM229AB2RXF0 380 aa5.02□□□□□ -1.61
KNTC1-215ENST00000546125 GNASQ5JWF2 1037 aa5.02□□□□□ -1.61
KNTC1-215ENST00000546125 USP17L2Q6R6M4 530 aa5.02□□□□□ -1.61
KNTC1-215ENST00000546125 USP17L1Q7RTZ2 530 aa5.02□□□□□ -1.61
KNTC1-215ENST00000546125 FHDC1Q9C0D6 1143 aaPredicted RBP5.02□□□□□ -1.61
KNTC1-215ENST00000546125 MKRN1Q9UHC7 482 aaKnown RBP5.02□□□□□ -1.61
KNTC1-215ENST00000546125 PALM3A6NDB9 673 aaPredicted RBP5.01□□□□□ -1.61
KNTC1-215ENST00000546125 ZBTB7BO15156 539 aaPredicted RBP5.01□□□□□ -1.61
KNTC1-215ENST00000546125 VSIG8P0DPA2 414 aa5.01□□□□□ -1.61
KNTC1-215ENST00000546125 SMTNP53814 917 aa5.01□□□□□ -1.61
KNTC1-215ENST00000546125 C4orf17Q53FE4 359 aa5.01□□□□□ -1.61
KNTC1-215ENST00000546125 WDR44Q5JSH3 913 aa5.01□□□□□ -1.61
KNTC1-215ENST00000546125 TRIM50Q86XT4 487 aa5.01□□□□□ -1.61
KNTC1-215ENST00000546125 PPARGC1BQ86YN6 1023 aaKnown RBP5.01□□□□□ -1.61
KNTC1-215ENST00000546125 PLEKHM2Q8IWE5 1019 aa5.01□□□□□ -1.61
KNTC1-215ENST00000546125 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.01□□□□□ -1.61
KNTC1-215ENST00000546125 NANOS1Q8WY41 292 aaKnown RBP5.01□□□□□ -1.61
KNTC1-215ENST00000546125 ZMYND15Q9H091 742 aa5.01□□□□□ -1.61
KNTC1-215ENST00000546125 DYRK1BQ9Y463 629 aa5.01□□□□□ -1.61
KNTC1-215ENST00000546125 F11P03951 625 aa5□□□□□ -1.61
KNTC1-215ENST00000546125 LMOD1P29536 600 aaPredicted RBP5□□□□□ -1.61
KNTC1-215ENST00000546125 DBN1Q16643 649 aa5□□□□□ -1.61
KNTC1-215ENST00000546125 CNTNAP3BQ96NU0 1288 aa5□□□□□ -1.61
KNTC1-215ENST00000546125 COL25A1Q9BXS0 654 aaPredicted RBP5□□□□□ -1.61
KNTC1-215ENST00000546125 CNTNAP3Q9BZ76 1288 aa5□□□□□ -1.61
KNTC1-215ENST00000546125 PPP1R12CQ9BZL4 782 aa5□□□□□ -1.61
KNTC1-215ENST00000546125 GPAMQ9HCL2 828 aa5□□□□□ -1.61
KNTC1-215ENST00000546125 DNAAF2Q9NVR5 837 aaKnown RBP5□□□□□ -1.61
KNTC1-215ENST00000546125 ZNF358Q9NW07 568 aa5□□□□□ -1.61
KNTC1-215ENST00000546125 A6NJY4 79 aa4.99□□□□□ -1.61
KNTC1-215ENST00000546125 BACH1O14867 736 aa4.99□□□□□ -1.61
KNTC1-215ENST00000546125 RASA1P20936 1047 aa4.99□□□□□ -1.61
KNTC1-215ENST00000546125 LORP23490 312 aaPredicted RBP4.99□□□□□ -1.61
KNTC1-215ENST00000546125 ATP1A2P50993 1020 aa4.99□□□□□ -1.61
KNTC1-215ENST00000546125 CLDN10P78369 228 aa4.99□□□□□ -1.61
KNTC1-215ENST00000546125 CCDC102BQ68D86 513 aa4.99□□□□□ -1.61
KNTC1-215ENST00000546125 TRIM22Q8IYM9 498 aa4.99□□□□□ -1.61
KNTC1-215ENST00000546125 OGFOD1Q8N543 542 aa4.99□□□□□ -1.61
KNTC1-215ENST00000546125 ZSCAN1Q8NBB4 408 aa4.99□□□□□ -1.61
KNTC1-215ENST00000546125 TPCN2Q8NHX9 752 aa4.99□□□□□ -1.61
KNTC1-215ENST00000546125 RHBDD1Q8TEB9 315 aa4.99□□□□□ -1.61
KNTC1-215ENST00000546125 AIDAQ96BJ3 306 aa4.99□□□□□ -1.61
KNTC1-215ENST00000546125 SLC4A9Q96Q91 983 aa4.99□□□□□ -1.61
KNTC1-215ENST00000546125 RBM19Q9Y4C8 960 aaKnown RBP4.99□□□□□ -1.61
KNTC1-215ENST00000546125 MAFBQ9Y5Q3 323 aaPredicted RBP4.99□□□□□ -1.61
KNTC1-215ENST00000546125 H7C1W4 665 aa4.98□□□□□ -1.61
KNTC1-215ENST00000546125 GPR25O00155 361 aa4.98□□□□□ -1.61
KNTC1-215ENST00000546125 CDK2AP1O14519 115 aa4.98□□□□□ -1.61
KNTC1-215ENST00000546125 MSX1P28360 303 aa4.98□□□□□ -1.61
KNTC1-215ENST00000546125 PLA2G4AP47712 749 aa4.98□□□□□ -1.61
KNTC1-215ENST00000546125 CDCA8Q53HL2 280 aa4.98□□□□□ -1.61
KNTC1-215ENST00000546125 FOXR1Q6PIV2 292 aa4.98□□□□□ -1.61
KNTC1-215ENST00000546125 TNS4Q8IZW8 715 aa4.98□□□□□ -1.61
KNTC1-215ENST00000546125 GTPBP3Q969Y2 492 aaKnown RBP4.98□□□□□ -1.61
KNTC1-215ENST00000546125 ZNF594Q96JF6 807 aaPredicted RBP4.98□□□□□ -1.61
KNTC1-215ENST00000546125 NIFKQ9BYG3 293 aaKnown RBP4.98□□□□□ -1.61
KNTC1-215ENST00000546125 CABP1Q9NZU7 370 aa4.98□□□□□ -1.61
KNTC1-215ENST00000546125 KIAA1024Q9UPX6 916 aa4.98□□□□□ -1.61
KNTC1-215ENST00000546125 PARP3Q9Y6F1 533 aa4.98□□□□□ -1.61
KNTC1-215ENST00000546125 A0A1B0GTH6 734 aa4.97□□□□□ -1.61
KNTC1-215ENST00000546125 SFI1A8K8P3 1242 aa4.97□□□□□ -1.61
KNTC1-215ENST00000546125 CSB-PGBD3P0DP91 1061 aa4.97□□□□□ -1.61
KNTC1-215ENST00000546125 RFX1P22670 979 aa4.97□□□□□ -1.61
KNTC1-215ENST00000546125 KRT76Q01546 638 aa4.97□□□□□ -1.61
KNTC1-215ENST00000546125 RNFT1Q5M7Z0 435 aa4.97□□□□□ -1.61
KNTC1-215ENST00000546125 TBCELQ5QJ74 424 aa4.97□□□□□ -1.61
KNTC1-215ENST00000546125 LARP1Q6PKG0 1096 aaKnown RBP4.97□□□□□ -1.61
KNTC1-215ENST00000546125 PGBD3Q8N328 593 aa4.97□□□□□ -1.61
KNTC1-215ENST00000546125 LARGE2Q8N3Y3 721 aa4.97□□□□□ -1.61
KNTC1-215ENST00000546125 ZNF837Q96EG3 531 aaPredicted RBP4.97□□□□□ -1.61
KNTC1-215ENST00000546125 GMCL1Q96IK5 515 aa4.97□□□□□ -1.61
KNTC1-215ENST00000546125 NUCKS1Q9H1E3 243 aaKnown RBP4.97□□□□□ -1.61
KNTC1-215ENST00000546125 RUBCNLQ9H714 662 aa4.97□□□□□ -1.61
KNTC1-215ENST00000546125 VRTNQ9H8Y1 702 aa4.97□□□□□ -1.61
KNTC1-215ENST00000546125 USP3Q9Y6I4 520 aa4.97□□□□□ -1.61
KNTC1-215ENST00000546125 MTFR1Q15390 333 aa4.96□□□□□ -1.62
KNTC1-215ENST00000546125 SCHIP1Q9P0W5 487 aaPredicted RBP4.96□□□□□ -1.62
KNTC1-215ENST00000546125 LGR5O75473 907 aa4.95□□□□□ -1.62
KNTC1-215ENST00000546125 ARSJQ5FYB0 599 aaPredicted RBP4.95□□□□□ -1.62
KNTC1-215ENST00000546125 KANK4Q5T7N3 995 aaPredicted RBP4.95□□□□□ -1.62
KNTC1-215ENST00000546125 TRERF1Q96PN7 1200 aa4.95□□□□□ -1.62
KNTC1-215ENST00000546125 HINFPQ9BQA5 517 aa4.95□□□□□ -1.62
KNTC1-215ENST00000546125 ZNF232Q9UNY5 417 aa4.95□□□□□ -1.62
KNTC1-215ENST00000546125 IQSEC3Q9UPP2 1182 aaPredicted RBP4.95□□□□□ -1.62
KNTC1-215ENST00000546125 GAS6Q14393 721 aa4.94□□□□□ -1.62
KNTC1-215ENST00000546125 CRTC2Q53ET0 693 aaPredicted RBP4.94□□□□□ -1.62
KNTC1-215ENST00000546125 EFHC2Q5JST6 749 aa4.94□□□□□ -1.62
KNTC1-215ENST00000546125 CFAP70Q5T0N1 1121 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms