RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 POTEJP0CG39 1038 aa13.69□□□□□ -0.22
CIT-217ENST00000545913 SSBP05455 408 aaKnown RBP eCLIP13.69□□□□□ -0.22
CIT-217ENST00000545913 ABCC11Q96J66 1382 aa13.69□□□□□ -0.22
CIT-217ENST00000545913 EIF5P55010 431 aaKnown RBP13.69□□□□□ -0.22
CIT-217ENST00000545913 KIF2AO00139 706 aaPredicted RBP13.69□□□□□ -0.22
CIT-217ENST00000545913 TNIP1Q15025 636 aa13.68□□□□□ -0.22
CIT-217ENST00000545913 CCDC61Q9Y6R9 512 aa13.68□□□□□ -0.22
CIT-217ENST00000545913 IDH1O75874 414 aaKnown RBP13.68□□□□□ -0.22
CIT-217ENST00000545913 CCDC148Q8NFR7 591 aa13.68□□□□□ -0.22
CIT-217ENST00000545913 HMGB1P09429 215 aaKnown RBP13.67□□□□□ -0.22
CIT-217ENST00000545913 ARHGAP29Q52LW3 1261 aa13.67□□□□□ -0.22
CIT-217ENST00000545913 ALDH1L2Q3SY69 923 aa13.67□□□□□ -0.22
CIT-217ENST00000545913 METTL24Q5JXM2 366 aa13.67□□□□□ -0.22
CIT-217ENST00000545913 TMOD2Q9NZR1 351 aa13.67□□□□□ -0.22
CIT-217ENST00000545913 LARP1Q6PKG0 1096 aaKnown RBP13.67□□□□□ -0.22
CIT-217ENST00000545913 TMEM57Q8N5G2 664 aa13.67□□□□□ -0.22
CIT-217ENST00000545913 NESP48681 1621 aa13.67□□□□□ -0.22
CIT-217ENST00000545913 CFAP100Q494V2 611 aa13.67□□□□□ -0.22
CIT-217ENST00000545913 CAVIN4Q5BKX8 364 aa13.67□□□□□ -0.22
CIT-217ENST00000545913 PRXQ9BXM0 1461 aa13.67□□□□□ -0.22
CIT-217ENST00000545913 CETN2P41208 172 aa13.67□□□□□ -0.22
CIT-217ENST00000545913 LAMC3Q9Y6N6 1575 aa13.66□□□□□ -0.22
CIT-217ENST00000545913 MCM4P33991 863 aa13.66□□□□□ -0.22
CIT-217ENST00000545913 TAX1BP1Q86VP1 789 aa13.66□□□□□ -0.22
CIT-217ENST00000545913 UQCRHLA0A096LP55 91 aa13.66□□□□□ -0.22
CIT-217ENST00000545913 UQCRHP07919 91 aa13.66□□□□□ -0.22
CIT-217ENST00000545913 TAF4BQ92750 862 aa13.66□□□□□ -0.22
CIT-217ENST00000545913 PHAXQ9H814 394 aaKnown RBP13.66□□□□□ -0.22
CIT-217ENST00000545913 FGFR1OPO95684 399 aaKnown RBP13.66□□□□□ -0.22
CIT-217ENST00000545913 SH2B1Q9NRF2 756 aaPredicted RBP13.66□□□□□ -0.22
CIT-217ENST00000545913 ARHGEF11O15085 1522 aa13.66□□□□□ -0.22
CIT-217ENST00000545913 RAB34Q9BZG1 259 aa13.65□□□□□ -0.22
CIT-217ENST00000545913 AMOTQ4VCS5 1084 aa13.65□□□□□ -0.22
CIT-217ENST00000545913 IL1RAPL2Q9NP60 686 aa13.65□□□□□ -0.22
CIT-217ENST00000545913 ABCF2Q9UG63 623 aa13.65□□□□□ -0.22
CIT-217ENST00000545913 MX1P20591 662 aa13.65□□□□□ -0.22
CIT-217ENST00000545913 MAGI1Q96QZ7 1491 aaPredicted RBP13.65□□□□□ -0.22
CIT-217ENST00000545913 MCM3P25205 808 aa13.65□□□□□ -0.22
CIT-217ENST00000545913 SLFN5Q08AF3 891 aa13.65□□□□□ -0.22
CIT-217ENST00000545913 SCAND2PQ9GZW5 306 aaPredicted RBP13.65□□□□□ -0.22
CIT-217ENST00000545913 BRPF3Q9ULD4 1205 aa13.65□□□□□ -0.22
CIT-217ENST00000545913 NUTM2BA6NNL0 878 aaPredicted RBP13.65□□□□□ -0.22
CIT-217ENST00000545913 NUTM2EB1AL46 878 aaPredicted RBP13.65□□□□□ -0.22
CIT-217ENST00000545913 USP8P40818 1118 aa13.65□□□□□ -0.22
CIT-217ENST00000545913 NUTM2AQ8IVF1 878 aaPredicted RBP13.65□□□□□ -0.22
CIT-217ENST00000545913 USP5P45974 858 aa13.65□□□□□ -0.22
CIT-217ENST00000545913 MAP9Q49MG5 647 aa13.65□□□□□ -0.22
CIT-217ENST00000545913 DUSP27Q5VZP5 1158 aa13.65□□□□□ -0.22
CIT-217ENST00000545913 NUDT16Q96DE0 195 aaKnown RBP13.65□□□□□ -0.22
CIT-217ENST00000545913 INCENPQ9NQS7 918 aa13.65□□□□□ -0.22
CIT-217ENST00000545913 NBPF8Q3BBV2 869 aa13.64□□□□□ -0.23
CIT-217ENST00000545913 VPS36Q86VN1 386 aa13.64□□□□□ -0.23
CIT-217ENST00000545913 GBP3Q9H0R5 595 aa13.64□□□□□ -0.23
CIT-217ENST00000545913 NAPBQ9H115 298 aa13.64□□□□□ -0.23
CIT-217ENST00000545913 CCDC183Q5T5S1 534 aa13.64□□□□□ -0.23
CIT-217ENST00000545913 UNC13AQ9UPW8 1703 aa13.64□□□□□ -0.23
CIT-217ENST00000545913 ZPR1O75312 459 aa13.64□□□□□ -0.23
CIT-217ENST00000545913 SFPQP23246 707 aaKnown RBP eCLIP13.64□□□□□ -0.23
CIT-217ENST00000545913 ZSCAN12O43309 604 aa13.64□□□□□ -0.23
CIT-217ENST00000545913 SPA17Q15506 151 aa13.64□□□□□ -0.23
CIT-217ENST00000545913 FILIP1Q7Z7B0 1213 aa13.64□□□□□ -0.23
CIT-217ENST00000545913 TSG101Q99816 390 aa13.64□□□□□ -0.23
CIT-217ENST00000545913 EXOC6BQ9Y2D4 811 aa13.64□□□□□ -0.23
CIT-217ENST00000545913 NEBLO76041 1014 aa13.63□□□□□ -0.23
CIT-217ENST00000545913 FKBP15Q5T1M5 1219 aa13.63□□□□□ -0.23
CIT-217ENST00000545913 SPINK5Q9NQ38 1064 aaPredicted RBP13.63□□□□□ -0.23
CIT-217ENST00000545913 ANO10Q9NW15 660 aa13.63□□□□□ -0.23
CIT-217ENST00000545913 CTAGE5O15320 804 aa13.63□□□□□ -0.23
CIT-217ENST00000545913 MKNK2Q9HBH9 465 aa13.63□□□□□ -0.23
CIT-217ENST00000545913 TMOD3Q9NYL9 352 aa13.63□□□□□ -0.23
CIT-217ENST00000545913 SYCE3A1L190 88 aa13.63□□□□□ -0.23
CIT-217ENST00000545913 IFIT1P09914 478 aaKnown RBP13.63□□□□□ -0.23
CIT-217ENST00000545913 PDCL2Q8N4E4 241 aa13.63□□□□□ -0.23
CIT-217ENST00000545913 FAM193AP78312 1265 aa13.63□□□□□ -0.23
CIT-217ENST00000545913 RBM10P98175 930 aaKnown RBP13.62□□□□□ -0.23
CIT-217ENST00000545913 TAF7Q15545 349 aaPredicted RBP13.62□□□□□ -0.23
CIT-217ENST00000545913 PPP4R3AQ6IN85 833 aa13.62□□□□□ -0.23
CIT-217ENST00000545913 SLC26A8Q96RN1 970 aa13.62□□□□□ -0.23
CIT-217ENST00000545913 CRACR2AQ9BSW2 395 aa13.62□□□□□ -0.23
CIT-217ENST00000545913 UBXN4Q92575 508 aa13.62□□□□□ -0.23
CIT-217ENST00000545913 HSP90AB3PQ58FF7 597 aa13.62□□□□□ -0.23
CIT-217ENST00000545913 CCDC91Q7Z6B0 441 aa13.62□□□□□ -0.23
CIT-217ENST00000545913 IQCA1Q86XH1 822 aa13.62□□□□□ -0.23
CIT-217ENST00000545913 DDX11Q96FC9 970 aa13.62□□□□□ -0.23
CIT-217ENST00000545913 MAP3K12Q12852 859 aa13.62□□□□□ -0.23
CIT-217ENST00000545913 PTPRCP08575 1304 aa13.62□□□□□ -0.23
CIT-217ENST00000545913 C8orf76Q96K31 380 aa13.62□□□□□ -0.23
CIT-217ENST00000545913 HYPKQ9NX55 129 aa13.62□□□□□ -0.23
CIT-217ENST00000545913 ESPNB1AK53 854 aa13.61□□□□□ -0.23
CIT-217ENST00000545913 KIF5CO60282 957 aa13.61□□□□□ -0.23
CIT-217ENST00000545913 CCDC102AQ96A19 550 aa13.61□□□□□ -0.23
CIT-217ENST00000545913 ANKIB1Q9P2G1 1089 aa13.61□□□□□ -0.23
CIT-217ENST00000545913 SSR1P43307 286 aaKnown RBP13.61□□□□□ -0.23
CIT-217ENST00000545913 IFIT5Q13325 482 aaKnown RBP13.61□□□□□ -0.23
CIT-217ENST00000545913 SLF2Q8IX21 1173 aa13.61□□□□□ -0.23
CIT-217ENST00000545913 DZIP1Q86YF9 867 aaKnown RBP13.61□□□□□ -0.23
CIT-217ENST00000545913 CTCFLQ8NI51 663 aaPredicted RBP13.61□□□□□ -0.23
CIT-217ENST00000545913 POLR3DP05423 398 aaPredicted RBP13.61□□□□□ -0.23
CIT-217ENST00000545913 PIBF1Q8WXW3 757 aa13.61□□□□□ -0.23
CIT-217ENST00000545913 CCDC150Q8NCX0 1101 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms