RNA–Protein interactions for RNA: ENST00000545479.5

NPIPA1-207, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 2

Gene NPIPA1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-207ENST00000545479 LRP5O75197 1615 aa9.22□□□□□ -0.93
NPIPA1-207ENST00000545479 USP6P35125 1406 aa9.22□□□□□ -0.93
NPIPA1-207ENST00000545479 COL5A2P05997 1499 aaPredicted RBP9.21□□□□□ -0.93
NPIPA1-207ENST00000545479 SRPK2P78362 688 aaKnown RBP9.21□□□□□ -0.94
NPIPA1-207ENST00000545479 EZH2Q15910 746 aaKnown RBP9.21□□□□□ -0.94
NPIPA1-207ENST00000545479 TYW1BQ6NUM6 668 aa9.21□□□□□ -0.94
NPIPA1-207ENST00000545479 ABTB2Q8N961 1025 aa9.21□□□□□ -0.94
NPIPA1-207ENST00000545479 L3MBTL2Q969R5 705 aa9.21□□□□□ -0.94
NPIPA1-207ENST00000545479 EMILIN3Q9NT22 766 aa9.21□□□□□ -0.94
NPIPA1-207ENST00000545479 PHF14O94880 888 aa9.2□□□□□ -0.94
NPIPA1-207ENST00000545479 TRIM37O94972 964 aa9.2□□□□□ -0.94
NPIPA1-207ENST00000545479 R3HDM1Q15032 1099 aaKnown RBP9.2□□□□□ -0.94
NPIPA1-207ENST00000545479 BARGINQ6ZT62 677 aa9.2□□□□□ -0.94
NPIPA1-207ENST00000545479 LAPTM4BQ86VI4 370 aa9.2□□□□□ -0.94
NPIPA1-207ENST00000545479 CAMKK2Q96RR4 588 aa9.2□□□□□ -0.94
NPIPA1-207ENST00000545479 SIN3AQ96ST3 1273 aa9.2□□□□□ -0.94
NPIPA1-207ENST00000545479 IRX2Q9BZI1 471 aaPredicted RBP9.2□□□□□ -0.94
NPIPA1-207ENST00000545479 SLIT3O75094 1523 aa9.2□□□□□ -0.94
NPIPA1-207ENST00000545479 QRICH2Q9H0J4 1663 aa9.2□□□□□ -0.94
NPIPA1-207ENST00000545479 RGPD1P0DJD0 1748 aa9.19□□□□□ -0.94
NPIPA1-207ENST00000545479 GCP02774 474 aa9.19□□□□□ -0.94
NPIPA1-207ENST00000545479 CABP1Q9NZU7 370 aa9.19□□□□□ -0.94
NPIPA1-207ENST00000545479 PIK3C2AO00443 1686 aa9.18□□□□□ -0.94
NPIPA1-207ENST00000545479 TCP11L2Q8N4U5 519 aa9.18□□□□□ -0.94
NPIPA1-207ENST00000545479 TRPM1Q7Z4N2 1603 aa9.17□□□□□ -0.94
NPIPA1-207ENST00000545479 COL9A1P20849 921 aa9.17□□□□□ -0.94
NPIPA1-207ENST00000545479 EVA1CP58658 441 aa9.17□□□□□ -0.94
NPIPA1-207ENST00000545479 PROX2Q3B8N5 592 aa9.17□□□□□ -0.94
NPIPA1-207ENST00000545479 FAM196AQ6ZSG2 479 aa9.17□□□□□ -0.94
NPIPA1-207ENST00000545479 NYAP1Q6ZVC0 841 aa9.17□□□□□ -0.94
NPIPA1-207ENST00000545479 NLRP13Q86W25 1043 aa9.17□□□□□ -0.94
NPIPA1-207ENST00000545479 CPSF1Q10570 1443 aaKnown RBP9.16□□□□□ -0.94
NPIPA1-207ENST00000545479 ZBTB7CA1YPR0 619 aa9.16□□□□□ -0.94
NPIPA1-207ENST00000545479 APBA3O96018 575 aa9.16□□□□□ -0.94
NPIPA1-207ENST00000545479 EPAS1Q99814 870 aa9.16□□□□□ -0.94
NPIPA1-207ENST00000545479 LRRC37A3O60309 1634 aa9.16□□□□□ -0.94
NPIPA1-207ENST00000545479 CRB1P82279 1406 aa9.15□□□□□ -0.94
NPIPA1-207ENST00000545479 BRD4O60885 1362 aaPredicted RBP9.15□□□□□ -0.94
NPIPA1-207ENST00000545479 ROCK2O75116 1388 aaKnown RBP9.15□□□□□ -0.94
NPIPA1-207ENST00000545479 AATKQ6ZMQ8 1374 aa9.15□□□□□ -0.94
NPIPA1-207ENST00000545479 ITGBL1O95965 494 aaPredicted RBP9.15□□□□□ -0.94
NPIPA1-207ENST00000545479 PTF1AQ7RTS3 328 aa9.15□□□□□ -0.94
NPIPA1-207ENST00000545479 PEAK1Q9H792 1746 aa9.14□□□□□ -0.95
NPIPA1-207ENST00000545479 RREB1Q92766 1687 aa9.14□□□□□ -0.95
NPIPA1-207ENST00000545479 TTC21BQ7Z4L5 1316 aa9.14□□□□□ -0.95
NPIPA1-207ENST00000545479 EVC2Q86UK5 1308 aa9.14□□□□□ -0.95
NPIPA1-207ENST00000545479 SOWAHBA6NEL2 793 aa9.14□□□□□ -0.95
NPIPA1-207ENST00000545479 PDE3BQ13370 1112 aa9.14□□□□□ -0.95
NPIPA1-207ENST00000545479 NEUROD1Q13562 356 aa9.14□□□□□ -0.95
NPIPA1-207ENST00000545479 KIAA1468Q9P260 1216 aa9.14□□□□□ -0.95
NPIPA1-207ENST00000545479 THRAP3Q9Y2W1 955 aaKnown RBP9.14□□□□□ -0.95
NPIPA1-207ENST00000545479 NFAT5O94916 1531 aa9.14□□□□□ -0.95
NPIPA1-207ENST00000545479 COL18A1P39060 1754 aa9.14□□□□□ -0.95
NPIPA1-207ENST00000545479 NUP188Q5SRE5 1749 aa9.14□□□□□ -0.95
NPIPA1-207ENST00000545479 PARP4Q9UKK3 1724 aaKnown RBP9.14□□□□□ -0.95
NPIPA1-207ENST00000545479 PARD3Q8TEW0 1356 aa9.13□□□□□ -0.95
NPIPA1-207ENST00000545479 ARHGEF25Q86VW2 580 aa9.13□□□□□ -0.95
NPIPA1-207ENST00000545479 ZFRQ96KR1 1074 aaKnown RBP9.13□□□□□ -0.95
NPIPA1-207ENST00000545479 CD163L1Q9NR16 1453 aa9.13□□□□□ -0.95
NPIPA1-207ENST00000545479 OVOS2A0A0G2JMS6 1433 aa9.13□□□□□ -0.95
NPIPA1-207ENST00000545479 OVOS2A0A0J9YW53 1432 aa9.13□□□□□ -0.95
NPIPA1-207ENST00000545479 OVOS2Q6IE36 1432 aa9.13□□□□□ -0.95
NPIPA1-207ENST00000545479 BCAMP50895 628 aa9.12□□□□□ -0.95
NPIPA1-207ENST00000545479 CAMK2BQ13554 666 aa9.12□□□□□ -0.95
NPIPA1-207ENST00000545479 C6orf132Q5T0Z8 1188 aa9.12□□□□□ -0.95
NPIPA1-207ENST00000545479 WDR17Q8IZU2 1322 aa9.11□□□□□ -0.95
NPIPA1-207ENST00000545479 TOM1L2Q6ZVM7 507 aa9.11□□□□□ -0.95
NPIPA1-207ENST00000545479 MARCH10Q8NA82 808 aaPredicted RBP9.11□□□□□ -0.95
NPIPA1-207ENST00000545479 SBNO2Q9Y2G9 1366 aa9.11□□□□□ -0.95
NPIPA1-207ENST00000545479 KTN1Q86UP2 1357 aaKnown RBP9.1□□□□□ -0.95
NPIPA1-207ENST00000545479 TTC21AQ8NDW8 1320 aa9.09□□□□□ -0.95
NPIPA1-207ENST00000545479 TRIM6-TRIM34B2RNG4 842 aa9.09□□□□□ -0.95
NPIPA1-207ENST00000545479 DDB1Q16531 1140 aa9.09□□□□□ -0.95
NPIPA1-207ENST00000545479 NME9Q86XW9 330 aa9.09□□□□□ -0.95
NPIPA1-207ENST00000545479 PDGFDQ9GZP0 370 aaPredicted RBP9.09□□□□□ -0.95
NPIPA1-207ENST00000545479 AKAP12Q02952 1782 aa9.09□□□□□ -0.95
NPIPA1-207ENST00000545479 WNK3Q9BYP7 1800 aa9.08□□□□□ -0.96
NPIPA1-207ENST00000545479 BCL9O00512 1426 aa9.08□□□□□ -0.96
NPIPA1-207ENST00000545479 TNS2Q63HR2 1409 aa9.08□□□□□ -0.96
NPIPA1-207ENST00000545479 DPYSL4O14531 572 aa9.08□□□□□ -0.96
NPIPA1-207ENST00000545479 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.08□□□□□ -0.96
NPIPA1-207ENST00000545479 KCNH5Q8NCM2 988 aa9.08□□□□□ -0.96
NPIPA1-207ENST00000545479 CARD10Q9BWT7 1032 aa9.08□□□□□ -0.96
NPIPA1-207ENST00000545479 USP31Q70CQ4 1352 aa9.08□□□□□ -0.96
NPIPA1-207ENST00000545479 MON2Q7Z3U7 1717 aa9.08□□□□□ -0.96
NPIPA1-207ENST00000545479 ABCC6O95255 1503 aa9.07□□□□□ -0.96
NPIPA1-207ENST00000545479 CSB-PGBD3P0DP91 1061 aa9.07□□□□□ -0.96
NPIPA1-207ENST00000545479 KCNC4Q03721 635 aa9.07□□□□□ -0.96
NPIPA1-207ENST00000545479 CARD11Q9BXL7 1154 aa9.07□□□□□ -0.96
NPIPA1-207ENST00000545479 WBP1LQ9NX94 342 aa9.07□□□□□ -0.96
NPIPA1-207ENST00000545479 SEPT9Q9UHD8 586 aaPredicted RBP9.07□□□□□ -0.96
NPIPA1-207ENST00000545479 A0A1W2PP64 1363 aa9.07□□□□□ -0.96
NPIPA1-207ENST00000545479 PLSCR1O15162 318 aa9.06□□□□□ -0.96
NPIPA1-207ENST00000545479 SLC12A5Q9H2X9 1139 aa9.06□□□□□ -0.96
NPIPA1-207ENST00000545479 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.06□□□□□ -0.96
NPIPA1-207ENST00000545479 USP54Q70EL1 1684 aa9.06□□□□□ -0.96
NPIPA1-207ENST00000545479 RGPD3A6NKT7 1758 aaPredicted RBP9.05□□□□□ -0.96
NPIPA1-207ENST00000545479 RGPD4Q7Z3J3 1758 aa9.05□□□□□ -0.96
NPIPA1-207ENST00000545479 CASZ1Q86V15 1759 aa9.05□□□□□ -0.96
NPIPA1-207ENST00000545479 CCDC7Q96M83 1385 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms