RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 KCNA3P22001 575 aa10.34□□□□□ -0.75
COPA-207ENST00000545284 DALRD3Q5D0E6 543 aaKnown RBP10.34□□□□□ -0.75
COPA-207ENST00000545284 RC3H1Q5TC82 1133 aaKnown RBP10.34□□□□□ -0.75
COPA-207ENST00000545284 LINC00116Q8NCU8 138 aa10.34□□□□□ -0.75
COPA-207ENST00000545284 PRDM10Q9NQV6 1147 aa10.34□□□□□ -0.75
COPA-207ENST00000545284 RTCBQ9Y3I0 505 aaKnown RBP10.34□□□□□ -0.75
COPA-207ENST00000545284 PARP3Q9Y6F1 533 aa10.34□□□□□ -0.75
COPA-207ENST00000545284 A0A1W2PP64 1363 aa10.34□□□□□ -0.75
COPA-207ENST00000545284 KIF24Q5T7B8 1368 aa10.34□□□□□ -0.75
COPA-207ENST00000545284 ATP6V1AP38606 617 aa10.33□□□□□ -0.76
COPA-207ENST00000545284 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.33□□□□□ -0.767e-10■□□□□ 10.6
COPA-207ENST00000545284 RNF181Q9P0P0 153 aa10.33□□□□□ -0.76
COPA-207ENST00000545284 GLTPD2A6NH11 291 aa10.32□□□□□ -0.76
COPA-207ENST00000545284 SPG7Q9UQ90 795 aa10.32□□□□□ -0.76
COPA-207ENST00000545284 KCPQ6ZWJ8 1503 aa10.32□□□□□ -0.76
COPA-207ENST00000545284 INSRP06213 1382 aa10.31□□□□□ -0.76
COPA-207ENST00000545284 CREBZFQ9NS37 354 aa10.31□□□□□ -0.76
COPA-207ENST00000545284 TMOD3Q9NYL9 352 aa10.31□□□□□ -0.76
COPA-207ENST00000545284 GYS1P13807 737 aa10.3□□□□□ -0.76
COPA-207ENST00000545284 RFC4P35249 363 aa10.3□□□□□ -0.76
COPA-207ENST00000545284 ITPK1Q13572 414 aa10.3□□□□□ -0.76
COPA-207ENST00000545284 SMIM5Q71RC9 77 aa10.3□□□□□ -0.76
COPA-207ENST00000545284 ARHGEF1Q92888 912 aaKnown RBP10.3□□□□□ -0.76
COPA-207ENST00000545284 TAF1LQ8IZX4 1826 aa10.3□□□□□ -0.76
COPA-207ENST00000545284 KIF13BQ9NQT8 1826 aa10.3□□□□□ -0.76
COPA-207ENST00000545284 UBR3Q6ZT12 1888 aa10.3□□□□□ -0.76
COPA-207ENST00000545284 RPS6KA4O75676 772 aa10.29□□□□□ -0.76
COPA-207ENST00000545284 USHBP1Q8N6Y0 703 aa10.29□□□□□ -0.76
COPA-207ENST00000545284 ASAP1Q9ULH1 1129 aa10.29□□□□□ -0.76
COPA-207ENST00000545284 TOGARAM1Q9Y4F4 1720 aa10.29□□□□□ -0.76
COPA-207ENST00000545284 KDM6AO15550 1401 aaPredicted RBP10.28□□□□□ -0.76
COPA-207ENST00000545284 LMNB1P20700 586 aa10.28□□□□□ -0.76
COPA-207ENST00000545284 CTCFP49711 727 aaPredicted RBP10.28□□□□□ -0.76
COPA-207ENST00000545284 RRS1Q15050 365 aaKnown RBP10.28□□□□□ -0.76
COPA-207ENST00000545284 DPY19L2Q6NUT2 758 aa10.28□□□□□ -0.76
COPA-207ENST00000545284 CNTNAP4Q9C0A0 1308 aa10.28□□□□□ -0.76
COPA-207ENST00000545284 FLT4P35916 1363 aa10.27□□□□□ -0.76
COPA-207ENST00000545284 FBLN1P23142 703 aa10.27□□□□□ -0.77
COPA-207ENST00000545284 HSP90AB2PQ58FF8 381 aa10.27□□□□□ -0.77
COPA-207ENST00000545284 IFNL2Q8IZJ0 200 aa10.27□□□□□ -0.77
COPA-207ENST00000545284 ATG3Q9NT62 314 aa10.27□□□□□ -0.77
COPA-207ENST00000545284 TNRC6CQ9HCJ0 1690 aaKnown RBP10.27□□□□□ -0.77
COPA-207ENST00000545284 KIAA1551Q9HCM1 1747 aa10.27□□□□□ -0.77
COPA-207ENST00000545284 TONSLQ96HA7 1378 aa10.26□□□□□ -0.77
COPA-207ENST00000545284 FYB1O15117 783 aa10.26□□□□□ -0.77
COPA-207ENST00000545284 AIDAQ96BJ3 306 aa10.26□□□□□ -0.77
COPA-207ENST00000545284 CARD11Q9BXL7 1154 aa10.26□□□□□ -0.77
COPA-207ENST00000545284 ERVV-2B6SEH9 535 aa10.25□□□□□ -0.77
COPA-207ENST00000545284 KDRP35968 1356 aa10.25□□□□□ -0.77
COPA-207ENST00000545284 NCAPD2Q15021 1401 aa10.24□□□□□ -0.77
COPA-207ENST00000545284 MAP2P11137 1827 aaKnown RBP10.24□□□□□ -0.77
COPA-207ENST00000545284 FOXN1O15353 648 aa10.24□□□□□ -0.77
COPA-207ENST00000545284 PHKG2P15735 406 aa10.24□□□□□ -0.77
COPA-207ENST00000545284 RGS19P49795 217 aa10.24□□□□□ -0.77
COPA-207ENST00000545284 CHADLQ6NUI6 762 aa10.24□□□□□ -0.77
COPA-207ENST00000545284 ARFGEF1Q9Y6D6 1849 aa10.23□□□□□ -0.77
COPA-207ENST00000545284 POTECB2RU33 542 aa10.23□□□□□ -0.77
COPA-207ENST00000545284 HSP90AB1P08238 724 aaKnown RBP10.23□□□□□ -0.77
COPA-207ENST00000545284 C4AP0C0L4 1744 aa10.23□□□□□ -0.77
COPA-207ENST00000545284 CNTNAP1P78357 1384 aa10.23□□□□□ -0.77
COPA-207ENST00000545284 N4BP2Q86UW6 1770 aaPredicted RBP10.22□□□□□ -0.77
COPA-207ENST00000545284 TM4SF1P30408 202 aa10.22□□□□□ -0.77
COPA-207ENST00000545284 MLLT1Q03111 559 aaPredicted RBP10.22□□□□□ -0.77
COPA-207ENST00000545284 ABHD8Q96I13 439 aa10.22□□□□□ -0.77
COPA-207ENST00000545284 SLC4A9Q96Q91 983 aa10.22□□□□□ -0.77
COPA-207ENST00000545284 WBP1LQ9NX94 342 aa10.22□□□□□ -0.77
COPA-207ENST00000545284 USP42Q9H9J4 1324 aaKnown RBP10.22□□□□□ -0.77
COPA-207ENST00000545284 PKD1L3Q7Z443 1732 aa10.21□□□□□ -0.77
COPA-207ENST00000545284 POLRMTO00411 1230 aaKnown RBP10.21□□□□□ -0.77
COPA-207ENST00000545284 CHRNA5P30532 468 aa10.21□□□□□ -0.77
COPA-207ENST00000545284 DDR1Q08345 913 aa10.21□□□□□ -0.77
COPA-207ENST00000545284 FKBP8Q14318 412 aa10.21□□□□□ -0.77
COPA-207ENST00000545284 FAM161AQ3B820 660 aa10.21□□□□□ -0.77
COPA-207ENST00000545284 TTLL6Q8N841 843 aa10.21□□□□□ -0.77
COPA-207ENST00000545284 RBM42Q9BTD8 480 aaKnown RBP10.21□□□□□ -0.77
COPA-207ENST00000545284 GGNBP2Q9H3C7 697 aa10.21□□□□□ -0.77
COPA-207ENST00000545284 MKRN1Q9UHC7 482 aaKnown RBP10.21□□□□□ -0.77
COPA-207ENST00000545284 PDZRN3Q9UPQ7 1066 aa10.21□□□□□ -0.77
COPA-207ENST00000545284 ZNF831Q5JPB2 1677 aa10.21□□□□□ -0.78
COPA-207ENST00000545284 BRCA1P38398 1863 aaKnown RBP10.21□□□□□ -0.78
COPA-207ENST00000545284 MAP2K1Q02750 393 aaPredicted RBP10.2□□□□□ -0.78
COPA-207ENST00000545284 WASHC2AQ641Q2 1341 aa10.2□□□□□ -0.78
COPA-207ENST00000545284 TESK2Q96S53 571 aa10.2□□□□□ -0.78
COPA-207ENST00000545284 PASKQ96RG2 1323 aa10.19□□□□□ -0.78
COPA-207ENST00000545284 IQCA1LA6NCM1 817 aa10.19□□□□□ -0.78
COPA-207ENST00000545284 ZPR1O75312 459 aa10.19□□□□□ -0.78
COPA-207ENST00000545284 RASSF7Q02833 373 aa10.19□□□□□ -0.78
COPA-207ENST00000545284 ITGB4P16144 1822 aa10.19□□□□□ -0.78
COPA-207ENST00000545284 TMEM88BA6NKF7 163 aa10.18□□□□□ -0.78
COPA-207ENST00000545284 H0YIN7 160 aa10.18□□□□□ -0.78
COPA-207ENST00000545284 CRKLP46109 303 aaKnown RBP10.18□□□□□ -0.78
COPA-207ENST00000545284 VEGFBP49765 207 aa10.18□□□□□ -0.78
COPA-207ENST00000545284 LBX1P52954 281 aa10.18□□□□□ -0.78
COPA-207ENST00000545284 LDHDQ86WU2 507 aa10.18□□□□□ -0.78
COPA-207ENST00000545284 EYA1Q99502 592 aa10.18□□□□□ -0.78
COPA-207ENST00000545284 RGPD2P0DJD1 1756 aa10.18□□□□□ -0.78
COPA-207ENST00000545284 LTBP3Q9NS15 1303 aa10.17□□□□□ -0.78
COPA-207ENST00000545284 NFKBIEO00221 500 aa10.17□□□□□ -0.78
COPA-207ENST00000545284 ERFEQ4G0M1 354 aa10.17□□□□□ -0.78
COPA-207ENST00000545284 AMOTQ4VCS5 1084 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms