RNA–Protein interactions for RNA: ENST00000544777.1

KDM5A-211, Transcript of lysine demethylase 5A, humanhuman

TSL 2

Gene KDM5A, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-211ENST00000544777 A0A1W2PP64 1363 aa14.47□□□□□ -0.09
KDM5A-211ENST00000544777 LOC102724428A0A0B4J2F2 783 aa14.46□□□□□ -0.09
KDM5A-211ENST00000544777 SIK1P57059 783 aa14.46□□□□□ -0.09
KDM5A-211ENST00000544777 SMG6Q86US8 1419 aaKnown RBP14.46□□□□□ -0.09
KDM5A-211ENST00000544777 PCNTO95613 3336 aa14.45□□□□□ -0.1
KDM5A-211ENST00000544777 NLGN1Q8N2Q7 840 aa14.45□□□□□ -0.1
KDM5A-211ENST00000544777 PIGBQ92521 554 aa14.45□□□□□ -0.1
KDM5A-211ENST00000544777 RNF181Q9P0P0 153 aa14.45□□□□□ -0.1
KDM5A-211ENST00000544777 RTL1A6NKG5 1358 aa14.45□□□□□ -0.1
KDM5A-211ENST00000544777 CYP27B1O15528 508 aa14.44□□□□□ -0.1
KDM5A-211ENST00000544777 TMF1P82094 1093 aa14.44□□□□□ -0.1
KDM5A-211ENST00000544777 C4AP0C0L4 1744 aa14.44□□□□□ -0.1
KDM5A-211ENST00000544777 ATP6V1AP38606 617 aa14.43□□□□□ -0.1
KDM5A-211ENST00000544777 TRAPPC3LQ5T215 181 aa14.43□□□□□ -0.1
KDM5A-211ENST00000544777 PIM2Q9P1W9 311 aa14.43□□□□□ -0.1
KDM5A-211ENST00000544777 PARP3Q9Y6F1 533 aa14.43□□□□□ -0.1
KDM5A-211ENST00000544777 CCDC88AQ3V6T2 1871 aa14.42□□□□□ -0.1
KDM5A-211ENST00000544777 RRS1Q15050 365 aaKnown RBP14.42□□□□□ -0.1
KDM5A-211ENST00000544777 ITPK1Q13572 414 aa14.41□□□□□ -0.1
KDM5A-211ENST00000544777 DALRD3Q5D0E6 543 aaKnown RBP14.41□□□□□ -0.1
KDM5A-211ENST00000544777 RTCBQ9Y3I0 505 aaKnown RBP14.41□□□□□ -0.1
KDM5A-211ENST00000544777 KCNA3P22001 575 aa14.4□□□□□ -0.1
KDM5A-211ENST00000544777 DCAF5Q96JK2 942 aa14.4□□□□□ -0.1
KDM5A-211ENST00000544777 TMOD3Q9NYL9 352 aa14.4□□□□□ -0.1
KDM5A-211ENST00000544777 PUS7Q96PZ0 661 aaKnown RBP14.39□□□□□ -0.11
KDM5A-211ENST00000544777 ASAP1Q9ULH1 1129 aa14.39□□□□□ -0.11
KDM5A-211ENST00000544777 VEGFAP15692 232 aaPredicted RBP14.38□□□□□ -0.11
KDM5A-211ENST00000544777 NKX1-1Q15270 411 aaPredicted RBP14.38□□□□□ -0.11
KDM5A-211ENST00000544777 GYS1P13807 737 aa14.37□□□□□ -0.11
KDM5A-211ENST00000544777 ADRA2BP18089 450 aa14.37□□□□□ -0.11
KDM5A-211ENST00000544777 RFC4P35249 363 aa14.37□□□□□ -0.11
KDM5A-211ENST00000544777 ARHGEF1Q92888 912 aaKnown RBP14.37□□□□□ -0.11
KDM5A-211ENST00000544777 SPG7Q9UQ90 795 aa14.37□□□□□ -0.11
KDM5A-211ENST00000544777 INSRP06213 1382 aa14.36□□□□□ -0.11
KDM5A-211ENST00000544777 HSP90AB2PQ58FF8 381 aa14.36□□□□□ -0.11
KDM5A-211ENST00000544777 CARD11Q9BXL7 1154 aa14.36□□□□□ -0.11
KDM5A-211ENST00000544777 ZC3H4Q9UPT8 1303 aaKnown RBP14.36□□□□□ -0.11
KDM5A-211ENST00000544777 MYH14Q7Z406 1995 aaKnown RBP14.35□□□□□ -0.11
KDM5A-211ENST00000544777 GLTPD2A6NH11 291 aa14.35□□□□□ -0.11
KDM5A-211ENST00000544777 PCDH10Q9P2E7 1040 aa14.35□□□□□ -0.11
KDM5A-211ENST00000544777 RC3H1Q5TC82 1133 aaKnown RBP14.34□□□□□ -0.11
KDM5A-211ENST00000544777 ATG3Q9NT62 314 aa14.34□□□□□ -0.11
KDM5A-211ENST00000544777 COL5A3P25940 1745 aaPredicted RBP14.34□□□□□ -0.11
KDM5A-211ENST00000544777 FLT4P35916 1363 aa14.34□□□□□ -0.11
KDM5A-211ENST00000544777 ZNF831Q5JPB2 1677 aa14.33□□□□□ -0.11
KDM5A-211ENST00000544777 RPS6KA4O75676 772 aa14.33□□□□□ -0.12
KDM5A-211ENST00000544777 RBM42Q9BTD8 480 aaKnown RBP14.33□□□□□ -0.12
KDM5A-211ENST00000544777 GGNBP2Q9H3C7 697 aa14.33□□□□□ -0.12
KDM5A-211ENST00000544777 PRDM10Q9NQV6 1147 aa14.33□□□□□ -0.12
KDM5A-211ENST00000544777 FYB1O15117 783 aa14.32□□□□□ -0.12
KDM5A-211ENST00000544777 CHRNA5P30532 468 aa14.32□□□□□ -0.12
KDM5A-211ENST00000544777 RASSF7Q02833 373 aa14.32□□□□□ -0.12
KDM5A-211ENST00000544777 NEUROD1Q13562 356 aa14.32□□□□□ -0.12
KDM5A-211ENST00000544777 SIN3AQ96ST3 1273 aa14.32□□□□□ -0.12
KDM5A-211ENST00000544777 MKRN1Q9UHC7 482 aaKnown RBP14.32□□□□□ -0.12
KDM5A-211ENST00000544777 KIF24Q5T7B8 1368 aa14.32□□□□□ -0.12
KDM5A-211ENST00000544777 TIAM2Q8IVF5 1701 aa14.32□□□□□ -0.12
KDM5A-211ENST00000544777 FOXN1O15353 648 aa14.31□□□□□ -0.12
KDM5A-211ENST00000544777 LMNB1P20700 586 aa14.31□□□□□ -0.12
KDM5A-211ENST00000544777 IFNL2Q8IZJ0 200 aa14.31□□□□□ -0.12
KDM5A-211ENST00000544777 CNTNAP4Q9C0A0 1308 aa14.31□□□□□ -0.12
KDM5A-211ENST00000544777 KIF20BQ96Q89 1820 aa14.31□□□□□ -0.12
KDM5A-211ENST00000544777 CREBZFQ9NS37 354 aa14.3□□□□□ -0.12
KDM5A-211ENST00000544777 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.3□□□□□ -0.123e-7■■□□□ 13
KDM5A-211ENST00000544777 KDRP35968 1356 aa14.3□□□□□ -0.12
KDM5A-211ENST00000544777 KDM6AO15550 1401 aaPredicted RBP14.3□□□□□ -0.12
KDM5A-211ENST00000544777 PHKG2P15735 406 aa14.29□□□□□ -0.12
KDM5A-211ENST00000544777 AIDAQ96BJ3 306 aa14.29□□□□□ -0.12
KDM5A-211ENST00000544777 SLC4A9Q96Q91 983 aa14.29□□□□□ -0.12
KDM5A-211ENST00000544777 DICER1Q9UPY3 1922 aaKnown RBP14.29□□□□□ -0.12
KDM5A-211ENST00000544777 CTCFP49711 727 aaPredicted RBP14.28□□□□□ -0.12
KDM5A-211ENST00000544777 FAM161AQ3B820 660 aa14.28□□□□□ -0.12
KDM5A-211ENST00000544777 DPY19L2Q6NUT2 758 aa14.28□□□□□ -0.12
KDM5A-211ENST00000544777 AFDNP55196 1824 aaKnown RBP14.27□□□□□ -0.12
KDM5A-211ENST00000544777 NCAPD2Q15021 1401 aa14.27□□□□□ -0.12
KDM5A-211ENST00000544777 DDR1Q08345 913 aa14.27□□□□□ -0.13
KDM5A-211ENST00000544777 FKBP8Q14318 412 aa14.27□□□□□ -0.13
KDM5A-211ENST00000544777 SRP68Q9UHB9 627 aaKnown RBP14.27□□□□□ -0.13
KDM5A-211ENST00000544777 POTECB2RU33 542 aa14.26□□□□□ -0.13
KDM5A-211ENST00000544777 DLEC1Q9Y238 1755 aa14.26□□□□□ -0.13
KDM5A-211ENST00000544777 TONSLQ96HA7 1378 aa14.25□□□□□ -0.13
KDM5A-211ENST00000544777 VIRMAQ69YN4 1812 aaKnown RBP14.25□□□□□ -0.13
KDM5A-211ENST00000544777 USP42Q9H9J4 1324 aaKnown RBP14.25□□□□□ -0.13
KDM5A-211ENST00000544777 ERVV-2B6SEH9 535 aa14.25□□□□□ -0.13
KDM5A-211ENST00000544777 PPM1GO15355 546 aaPredicted RBP14.25□□□□□ -0.13
KDM5A-211ENST00000544777 SLC24A1O60721 1099 aa14.25□□□□□ -0.13
KDM5A-211ENST00000544777 CHADLQ6NUI6 762 aa14.25□□□□□ -0.13
KDM5A-211ENST00000544777 EMILIN1Q9Y6C2 1016 aa14.25□□□□□ -0.13
KDM5A-211ENST00000544777 CNTNAP1P78357 1384 aa14.24□□□□□ -0.13
KDM5A-211ENST00000544777 POLRMTO00411 1230 aaKnown RBP14.24□□□□□ -0.13
KDM5A-211ENST00000544777 TM4SF1P30408 202 aa14.23□□□□□ -0.13
KDM5A-211ENST00000544777 CRKLP46109 303 aaKnown RBP14.23□□□□□ -0.13
KDM5A-211ENST00000544777 LBX1P52954 281 aa14.23□□□□□ -0.13
KDM5A-211ENST00000544777 TTLL6Q8N841 843 aa14.23□□□□□ -0.13
KDM5A-211ENST00000544777 ABHD8Q96I13 439 aa14.23□□□□□ -0.13
KDM5A-211ENST00000544777 EYA1Q99502 592 aa14.23□□□□□ -0.13
KDM5A-211ENST00000544777 TESK2Q96S53 571 aa14.22□□□□□ -0.13
KDM5A-211ENST00000544777 ST20-MTHFSA0A0A6YYL1 179 aa14.21□□□□□ -0.13
KDM5A-211ENST00000544777 ZPR1O75312 459 aa14.21□□□□□ -0.13
KDM5A-211ENST00000544777 HSP90AB1P08238 724 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms