RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 TGFB2P61812 414 aa22.35■■□□□ 1.17
DDX55-212ENST00000544738 POLR3GLQ9BT43 218 aa22.35■■□□□ 1.17
DDX55-212ENST00000544738 TAF1LQ8IZX4 1826 aa22.35■■□□□ 1.17
DDX55-212ENST00000544738 FCHSD2O94868 740 aa22.34■■□□□ 1.17
DDX55-212ENST00000544738 HSP90AB2PQ58FF8 381 aa22.34■■□□□ 1.17
DDX55-212ENST00000544738 JMYQ8N9B5 988 aa22.34■■□□□ 1.17
DDX55-212ENST00000544738 PRELPP51888 382 aa22.32■■□□□ 1.16
DDX55-212ENST00000544738 C9orf131Q5VYM1 1079 aa22.32■■□□□ 1.16
DDX55-212ENST00000544738 PXDNLA1KZ92 1463 aa22.31■■□□□ 1.16
DDX55-212ENST00000544738 DPEP1P16444 411 aa22.31■■□□□ 1.16
DDX55-212ENST00000544738 ATP6V1AP38606 617 aa22.31■■□□□ 1.16
DDX55-212ENST00000544738 ITPK1Q13572 414 aa22.31■■□□□ 1.16
DDX55-212ENST00000544738 FSTL1Q12841 308 aa22.3■■□□□ 1.16
DDX55-212ENST00000544738 ASAP1Q9ULH1 1129 aa22.3■■□□□ 1.16
DDX55-212ENST00000544738 TOGARAM1Q9Y4F4 1720 aa22.29■■□□□ 1.16
DDX55-212ENST00000544738 UBR3Q6ZT12 1888 aa22.29■■□□□ 1.16
DDX55-212ENST00000544738 EMILIN1Q9Y6C2 1016 aa22.29■■□□□ 1.16
DDX55-212ENST00000544738 CICQ96RK0 1608 aaPredicted RBP22.28■■□□□ 1.16
DDX55-212ENST00000544738 TRAPPC3LQ5T215 181 aa22.28■■□□□ 1.16
DDX55-212ENST00000544738 NLGN1Q8N2Q7 840 aa22.28■■□□□ 1.16
DDX55-212ENST00000544738 RRAGCQ9HB90 399 aa22.28■■□□□ 1.16
DDX55-212ENST00000544738 TMOD3Q9NYL9 352 aa22.28■■□□□ 1.16
DDX55-212ENST00000544738 PPM1GO15355 546 aaPredicted RBP22.27■■□□□ 1.16
DDX55-212ENST00000544738 WDR90Q96KV7 1748 aa22.27■■□□□ 1.16
DDX55-212ENST00000544738 CCDC87Q9NVE4 849 aa22.27■■□□□ 1.16
DDX55-212ENST00000544738 WASHC2AQ641Q2 1341 aa22.26■■□□□ 1.15
DDX55-212ENST00000544738 NKX1-1Q15270 411 aaPredicted RBP22.25■■□□□ 1.15
DDX55-212ENST00000544738 SPG7Q9UQ90 795 aa22.25■■□□□ 1.15
DDX55-212ENST00000544738 RTCBQ9Y3I0 505 aaKnown RBP22.25■■□□□ 1.15
DDX55-212ENST00000544738 KDM2BQ8NHM5 1336 aa22.25■■□□□ 1.15
DDX55-212ENST00000544738 PANK3Q9H999 370 aa22.24■■□□□ 1.15
DDX55-212ENST00000544738 N4BP2Q86UW6 1770 aaPredicted RBP22.24■■□□□ 1.15
DDX55-212ENST00000544738 POLKQ9UBT6 870 aa22.23■■□□□ 1.15
DDX55-212ENST00000544738 PARP3Q9Y6F1 533 aa22.23■■□□□ 1.15
DDX55-212ENST00000544738 ITGB4P16144 1822 aa22.22■■□□□ 1.15
DDX55-212ENST00000544738 ARHGEF1Q92888 912 aaKnown RBP22.22■■□□□ 1.15
DDX55-212ENST00000544738 ATG3Q9NT62 314 aa22.22■■□□□ 1.15
DDX55-212ENST00000544738 RNF181Q9P0P0 153 aa22.22■■□□□ 1.15
DDX55-212ENST00000544738 ANKRD26Q9UPS8 1709 aa22.21■■□□□ 1.15
DDX55-212ENST00000544738 KCNA3P22001 575 aa22.21■■□□□ 1.15
DDX55-212ENST00000544738 PIM2Q9P1W9 311 aa22.21■■□□□ 1.15
DDX55-212ENST00000544738 MAP2P11137 1827 aaKnown RBP22.21■■□□□ 1.15
DDX55-212ENST00000544738 KCPQ6ZWJ8 1503 aa22.21■■□□□ 1.15
DDX55-212ENST00000544738 RFC4P35249 363 aa22.2■■□□□ 1.14
DDX55-212ENST00000544738 PLEKHG2Q9H7P9 1386 aa22.2■■□□□ 1.14
DDX55-212ENST00000544738 C10orf71Q711Q0 1435 aa22.2■■□□□ 1.14
DDX55-212ENST00000544738 GYS1P13807 737 aa22.19■■□□□ 1.14
DDX55-212ENST00000544738 DALRD3Q5D0E6 543 aaKnown RBP22.19■■□□□ 1.14
DDX55-212ENST00000544738 SMC1BQ8NDV3 1235 aa22.19■■□□□ 1.14
DDX55-212ENST00000544738 RBM42Q9BTD8 480 aaKnown RBP22.19■■□□□ 1.14
DDX55-212ENST00000544738 NCAPD2Q15021 1401 aa22.18■■□□□ 1.14
DDX55-212ENST00000544738 HSPA1AP0DMV8 641 aaKnown RBP22.18■■□□□ 1.14
DDX55-212ENST00000544738 HSPA1BP0DMV9 641 aaKnown RBP22.18■■□□□ 1.14
DDX55-212ENST00000544738 TNNT2P45379 298 aaPredicted RBP22.18■■□□□ 1.14
DDX55-212ENST00000544738 EYA1Q99502 592 aa22.17■■□□□ 1.14
DDX55-212ENST00000544738 IFNL2Q8IZJ0 200 aa22.16■■□□□ 1.14
DDX55-212ENST00000544738 DCAF5Q96JK2 942 aa22.16■■□□□ 1.14
DDX55-212ENST00000544738 KNSTRNQ9Y448 316 aa22.16■■□□□ 1.14
DDX55-212ENST00000544738 KIF13BQ9NQT8 1826 aa22.15■■□□□ 1.14
DDX55-212ENST00000544738 KIAA1551Q9HCM1 1747 aa22.15■■□□□ 1.14
DDX55-212ENST00000544738 ADRA2BP18089 450 aa22.15■■□□□ 1.14
DDX55-212ENST00000544738 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.15■■□□□ 1.144e-6■□□□□ 9.3
DDX55-212ENST00000544738 PHKG2P15735 406 aa22.14■■□□□ 1.13
DDX55-212ENST00000544738 SLC4A9Q96Q91 983 aa22.14■■□□□ 1.13
DDX55-212ENST00000544738 RPS6KA4O75676 772 aa22.13■■□□□ 1.13
DDX55-212ENST00000544738 RC3H1Q5TC82 1133 aaKnown RBP22.13■■□□□ 1.13
DDX55-212ENST00000544738 MORC1Q86VD1 984 aa22.13■■□□□ 1.13
DDX55-212ENST00000544738 CHRNA5P30532 468 aa22.12■■□□□ 1.13
DDX55-212ENST00000544738 EIF4A2Q14240 407 aaKnown RBP22.12■■□□□ 1.13
DDX55-212ENST00000544738 PKD1L3Q7Z443 1732 aa22.11■■□□□ 1.13
DDX55-212ENST00000544738 KIF7Q2M1P5 1343 aa22.09■■□□□ 1.13
DDX55-212ENST00000544738 SRP68Q9UHB9 627 aaKnown RBP22.09■■□□□ 1.13
DDX55-212ENST00000544738 C4AP0C0L4 1744 aa22.09■■□□□ 1.13
DDX55-212ENST00000544738 VEGFAP15692 232 aaPredicted RBP22.08■■□□□ 1.13
DDX55-212ENST00000544738 CNTNAP4Q9C0A0 1308 aa22.07■■□□□ 1.12
DDX55-212ENST00000544738 FKBP8Q14318 412 aa22.07■■□□□ 1.12
DDX55-212ENST00000544738 RASSF7Q02833 373 aa22.06■■□□□ 1.12
DDX55-212ENST00000544738 DDR1Q08345 913 aa22.06■■□□□ 1.12
DDX55-212ENST00000544738 KDRP35968 1356 aa22.06■■□□□ 1.12
DDX55-212ENST00000544738 ERVV-2B6SEH9 535 aa22.05■■□□□ 1.12
DDX55-212ENST00000544738 GLTPD2A6NH11 291 aa22.04■■□□□ 1.12
DDX55-212ENST00000544738 PTCD1O75127 700 aaKnown RBP22.04■■□□□ 1.12
DDX55-212ENST00000544738 AMER1Q5JTC6 1135 aaPredicted RBP22.04■■□□□ 1.12
DDX55-212ENST00000544738 BRCA1P38398 1863 aaKnown RBP22.04■■□□□ 1.12
DDX55-212ENST00000544738 ARFGEF1Q9Y6D6 1849 aa22.03■■□□□ 1.12
DDX55-212ENST00000544738 LMNB1P20700 586 aa22.02■■□□□ 1.12
DDX55-212ENST00000544738 CABP4P57796 275 aa22.02■■□□□ 1.12
DDX55-212ENST00000544738 CRKLP46109 303 aaKnown RBP22.01■■□□□ 1.11
DDX55-212ENST00000544738 PLEKHO1Q53GL0 409 aaPredicted RBP22.01■■□□□ 1.11
DDX55-212ENST00000544738 AMOTQ4VCS5 1084 aa22■■□□□ 1.11
DDX55-212ENST00000544738 USP42Q9H9J4 1324 aaKnown RBP22■■□□□ 1.11
DDX55-212ENST00000544738 ZC3H4Q9UPT8 1303 aaKnown RBP22■■□□□ 1.11
DDX55-212ENST00000544738 TNRC6CQ9HCJ0 1690 aaKnown RBP21.99■■□□□ 1.11
DDX55-212ENST00000544738 POLRMTO00411 1230 aaKnown RBP21.99■■□□□ 1.11
DDX55-212ENST00000544738 PER1O15534 1290 aaPredicted RBP21.99■■□□□ 1.11
DDX55-212ENST00000544738 HSP90AB1P08238 724 aaKnown RBP21.99■■□□□ 1.11
DDX55-212ENST00000544738 TM4SF1P30408 202 aa21.98■■□□□ 1.11
DDX55-212ENST00000544738 MKRN1Q9UHC7 482 aaKnown RBP21.98■■□□□ 1.11
DDX55-212ENST00000544738 SBF1O95248 1867 aa21.98■■□□□ 1.11
DDX55-212ENST00000544738 ZPR1O75312 459 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 201 ms