RNA–Protein interactions for RNA: ENST00000544496.5

PCMT1-211, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 2 BASIC

Gene PCMT1, Length 1,628 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-211ENST00000544496 KRT24Q2M2I5 525 aa29.88■■■□□ 2.37
PCMT1-211ENST00000544496 PANK1Q8TE04 598 aa29.88■■■□□ 2.37
PCMT1-211ENST00000544496 SLC52A2Q9HAB3 445 aa29.87■■■□□ 2.37
PCMT1-211ENST00000544496 PLCH1Q4KWH8 1693 aa29.87■■■□□ 2.37
PCMT1-211ENST00000544496 KDM6AO15550 1401 aaPredicted RBP29.86■■■□□ 2.37
PCMT1-211ENST00000544496 CDCA7Q9BWT1 371 aaPredicted RBP29.86■■■□□ 2.37
PCMT1-211ENST00000544496 SCN11AQ9UI33 1791 aa29.86■■■□□ 2.37
PCMT1-211ENST00000544496 VIRMAQ69YN4 1812 aaKnown RBP29.86■■■□□ 2.37
PCMT1-211ENST00000544496 CCDC30Q5VVM6 783 aa29.85■■■□□ 2.37
PCMT1-211ENST00000544496 THRAP3Q9Y2W1 955 aaKnown RBP29.85■■■□□ 2.37
PCMT1-211ENST00000544496 KDM3BQ7LBC6 1761 aa29.85■■■□□ 2.37
PCMT1-211ENST00000544496 EIF4A1P60842 406 aaKnown RBP29.85■■■□□ 2.37
PCMT1-211ENST00000544496 API5Q9BZZ5 524 aaKnown RBP29.85■■■□□ 2.37
PCMT1-211ENST00000544496 USP35Q9P2H5 1018 aa29.85■■■□□ 2.37
PCMT1-211ENST00000544496 COG6Q9Y2V7 657 aa29.85■■■□□ 2.37
PCMT1-211ENST00000544496 NKX1-1Q15270 411 aaPredicted RBP29.84■■■□□ 2.37
PCMT1-211ENST00000544496 STK31Q9BXU1 1019 aa29.84■■■□□ 2.37
PCMT1-211ENST00000544496 NWD2Q9ULI1 1742 aa29.84■■■□□ 2.37
PCMT1-211ENST00000544496 MVPQ14764 893 aaKnown RBP29.83■■■□□ 2.37
PCMT1-211ENST00000544496 CLUAP1Q96AJ1 413 aa29.83■■■□□ 2.37
PCMT1-211ENST00000544496 MRC1P22897 1456 aa29.82■■■□□ 2.36
PCMT1-211ENST00000544496 SLIT2O94813 1529 aa29.82■■■□□ 2.36
PCMT1-211ENST00000544496 SIPA1L3O60292 1781 aaPredicted RBP29.82■■■□□ 2.36
PCMT1-211ENST00000544496 PTPRCP08575 1304 aa29.82■■■□□ 2.36
PCMT1-211ENST00000544496 RLBP1P12271 317 aa29.81■■■□□ 2.36
PCMT1-211ENST00000544496 CHMP4BQ9H444 224 aaKnown RBP29.81■■■□□ 2.36
PCMT1-211ENST00000544496 DISP2A7MBM2 1401 aa29.8■■■□□ 2.36
PCMT1-211ENST00000544496 ERVV-2B6SEH9 535 aa29.8■■■□□ 2.36
PCMT1-211ENST00000544496 DDX19BQ9UMR2 479 aa29.8■■■□□ 2.36
PCMT1-211ENST00000544496 NRAPQ86VF7 1730 aa29.8■■■□□ 2.36
PCMT1-211ENST00000544496 CABP4P57796 275 aa29.79■■■□□ 2.36
PCMT1-211ENST00000544496 NFATC2IPQ8NCF5 419 aa29.78■■■□□ 2.36
PCMT1-211ENST00000544496 SPATA31A1Q5TZJ5 1347 aa29.78■■■□□ 2.36
PCMT1-211ENST00000544496 TCERG1O14776 1098 aaKnown RBP29.78■■■□□ 2.36
PCMT1-211ENST00000544496 SLC4A2P04920 1241 aa29.78■■■□□ 2.36
PCMT1-211ENST00000544496 DDX54Q8TDD1 881 aaKnown RBP29.77■■■□□ 2.36
PCMT1-211ENST00000544496 TNNQ9UQP3 1299 aa29.77■■■□□ 2.36
PCMT1-211ENST00000544496 ZNF790Q6PG37 636 aa29.76■■■□□ 2.35
PCMT1-211ENST00000544496 HDGFL1Q5TGJ6 251 aa29.75■■■□□ 2.35
PCMT1-211ENST00000544496 EXOC5O00471 708 aa29.74■■■□□ 2.35
PCMT1-211ENST00000544496 UNC5CLQ8IV45 518 aa29.74■■■□□ 2.35
PCMT1-211ENST00000544496 ITPRIPQ8IWB1 547 aa29.74■■■□□ 2.35
PCMT1-211ENST00000544496 NGLY1Q96IV0 654 aa29.74■■■□□ 2.35
PCMT1-211ENST00000544496 HEG1Q9ULI3 1381 aa29.74■■■□□ 2.35
PCMT1-211ENST00000544496 SPATA31A5Q5VU36 1347 aa29.74■■■□□ 2.35
PCMT1-211ENST00000544496 SPATA31A7Q8IWB4 1347 aa29.74■■■□□ 2.35
PCMT1-211ENST00000544496 TTC5Q8N0Z6 440 aa29.74■■■□□ 2.35
PCMT1-211ENST00000544496 ABCC4O15439 1325 aa29.73■■■□□ 2.35
PCMT1-211ENST00000544496 KCNQ3O43525 872 aa29.73■■■□□ 2.35
PCMT1-211ENST00000544496 SHANK3Q9BYB0 1731 aa29.72■■■□□ 2.35
PCMT1-211ENST00000544496 TMEM57Q8N5G2 664 aa29.72■■■□□ 2.35
PCMT1-211ENST00000544496 GIGYF1O75420 1035 aaPredicted RBP29.71■■■□□ 2.35
PCMT1-211ENST00000544496 HSPA1LP34931 641 aa29.71■■■□□ 2.35
PCMT1-211ENST00000544496 BARGINQ6ZT62 677 aa29.71■■■□□ 2.35
PCMT1-211ENST00000544496 CACNA1FO60840 1977 aa29.71■■■□□ 2.35
PCMT1-211ENST00000544496 C8orf37Q96NL8 207 aa29.71■■■□□ 2.35
PCMT1-211ENST00000544496 FNBP4Q8N3X1 1017 aaPredicted RBP29.7■■■□□ 2.34
PCMT1-211ENST00000544496 CCDC9Q9Y3X0 531 aaKnown RBP29.69■■■□□ 2.34
PCMT1-211ENST00000544496 WNK3Q9BYP7 1800 aa29.69■■■□□ 2.34
PCMT1-211ENST00000544496 TNS2Q63HR2 1409 aa29.67■■■□□ 2.34
PCMT1-211ENST00000544496 VPS72Q15906 364 aa29.67■■■□□ 2.34
PCMT1-211ENST00000544496 CENPQQ7L2Z9 268 aaPredicted RBP29.67■■■□□ 2.34
PCMT1-211ENST00000544496 FMNL2Q96PY5 1086 aa29.67■■■□□ 2.34
PCMT1-211ENST00000544496 EIF2S2P20042 333 aaKnown RBP29.66■■■□□ 2.34
PCMT1-211ENST00000544496 DBF4Q9UBU7 674 aaPredicted RBP29.66■■■□□ 2.34
PCMT1-211ENST00000544496 FLIIQ13045 1269 aa29.65■■■□□ 2.34
PCMT1-211ENST00000544496 SLC39A6Q13433 755 aa29.65■■■□□ 2.34
PCMT1-211ENST00000544496 INTS3Q68E01 1043 aaKnown RBP29.65■■■□□ 2.34
PCMT1-211ENST00000544496 DDB1Q16531 1140 aa29.64■■■□□ 2.34
PCMT1-211ENST00000544496 BCL9LQ86UU0 1499 aa29.64■■■□□ 2.34
PCMT1-211ENST00000544496 SNRPA1P09661 255 aaKnown RBP29.63■■■□□ 2.33
PCMT1-211ENST00000544496 NECTIN2Q92692 538 aa29.63■■■□□ 2.33
PCMT1-211ENST00000544496 MEX3CQ5U5Q3 659 aaKnown RBP29.63■■■□□ 2.33
PCMT1-211ENST00000544496 TMOD3Q9NYL9 352 aa29.63■■■□□ 2.33
PCMT1-211ENST00000544496 LRP6O75581 1613 aa29.62■■■□□ 2.33
PCMT1-211ENST00000544496 RGS12O14924 1447 aa29.61■■■□□ 2.33
PCMT1-211ENST00000544496 ZNF496Q96IT1 587 aaPredicted RBP29.61■■■□□ 2.33
PCMT1-211ENST00000544496 ZBTB40Q9NUA8 1239 aa29.61■■■□□ 2.33
PCMT1-211ENST00000544496 KDM2BQ8NHM5 1336 aa29.6■■■□□ 2.33
PCMT1-211ENST00000544496 FKBP5Q13451 457 aaPredicted RBP29.6■■■□□ 2.33
PCMT1-211ENST00000544496 G2E3Q7L622 706 aa29.6■■■□□ 2.33
PCMT1-211ENST00000544496 USP21Q9UK80 565 aa29.6■■■□□ 2.33
PCMT1-211ENST00000544496 CCT4P50991 539 aaKnown RBP29.6■■■□□ 2.33
PCMT1-211ENST00000544496 ZBTB7BO15156 539 aaPredicted RBP29.59■■■□□ 2.33
PCMT1-211ENST00000544496 CHPF2Q9P2E5 772 aa29.59■■■□□ 2.33
PCMT1-211ENST00000544496 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.58■■■□□ 2.33
PCMT1-211ENST00000544496 RWDD1Q9H446 243 aaPredicted RBP29.58■■■□□ 2.33
PCMT1-211ENST00000544496 HYPKQ9NX55 129 aa29.58■■■□□ 2.33
PCMT1-211ENST00000544496 DDX21Q9NR30 783 aaKnown RBP eCLIP29.56■■■□□ 2.32
PCMT1-211ENST00000544496 PCDHB15Q9Y5E8 787 aa29.54■■■□□ 2.32
PCMT1-211ENST00000544496 PAPPAQ13219 1627 aa29.54■■■□□ 2.32
PCMT1-211ENST00000544496 PXDNLA1KZ92 1463 aa29.54■■■□□ 2.32
PCMT1-211ENST00000544496 TOGARAM1Q9Y4F4 1720 aa29.53■■■□□ 2.32
PCMT1-211ENST00000544496 PHAXQ9H814 394 aaKnown RBP29.52■■■□□ 2.32
PCMT1-211ENST00000544496 ERBB4Q15303 1308 aa29.51■■■□□ 2.32
PCMT1-211ENST00000544496 UBR2Q8IWV8 1755 aa29.51■■■□□ 2.31
PCMT1-211ENST00000544496 PRAMEF22A3QJZ6 481 aa29.51■■■□□ 2.31
PCMT1-211ENST00000544496 SLC4A10Q6U841 1118 aa29.51■■■□□ 2.31
PCMT1-211ENST00000544496 HDAC1Q13547 482 aaPredicted RBP29.5■■■□□ 2.31
PCMT1-211ENST00000544496 PIGBQ92521 554 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms