RNA–Protein interactions for RNA: ENST00000544299.5

CHERP-202, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-202ENST00000544299 ZCRB1Q8TBF4 217 aaKnown RBP23.21■■□□□ 1.31
CHERP-202ENST00000544299 TRIM27P14373 513 aa23.2■■□□□ 1.3
CHERP-202ENST00000544299 KCNQ3O43525 872 aa23.19■■□□□ 1.3
CHERP-202ENST00000544299 PCDH11XQ9BZA7 1347 aa23.19■■□□□ 1.3
CHERP-202ENST00000544299 PCDH11YQ9BZA8 1340 aa23.19■■□□□ 1.3
CHERP-202ENST00000544299 ATF7IPQ6VMQ6 1270 aa23.19■■□□□ 1.3
CHERP-202ENST00000544299 EIF4A1P60842 406 aaKnown RBP23.18■■□□□ 1.3
CHERP-202ENST00000544299 DCAF5Q96JK2 942 aa23.18■■□□□ 1.3
CHERP-202ENST00000544299 USP35Q9P2H5 1018 aa23.18■■□□□ 1.3
CHERP-202ENST00000544299 COG6Q9Y2V7 657 aa23.18■■□□□ 1.3
CHERP-202ENST00000544299 BTBD11A6QL63 1104 aa23.17■■□□□ 1.3
CHERP-202ENST00000544299 CLUAP1Q96AJ1 413 aa23.17■■□□□ 1.3
CHERP-202ENST00000544299 LRP6O75581 1613 aa23.17■■□□□ 1.3
CHERP-202ENST00000544299 DZIP1LQ8IYY4 767 aaKnown RBP23.17■■□□□ 1.3
CHERP-202ENST00000544299 CCDC136Q96JN2 1154 aa23.17■■□□□ 1.3
CHERP-202ENST00000544299 SOS1Q07889 1333 aaPredicted RBP23.16■■□□□ 1.3
CHERP-202ENST00000544299 HSP90AB1P08238 724 aaKnown RBP23.16■■□□□ 1.3
CHERP-202ENST00000544299 SLC52A2Q9HAB3 445 aa23.16■■□□□ 1.3
CHERP-202ENST00000544299 IPO8O15397 1037 aaKnown RBP23.15■■□□□ 1.3
CHERP-202ENST00000544299 ARHGAP45Q92619 1136 aa23.15■■□□□ 1.3
CHERP-202ENST00000544299 NKX1-1Q15270 411 aaPredicted RBP23.14■■□□□ 1.3
CHERP-202ENST00000544299 HEG1Q9ULI3 1381 aa23.14■■□□□ 1.29
CHERP-202ENST00000544299 MS4A1P11836 297 aa23.14■■□□□ 1.29
CHERP-202ENST00000544299 HSPA1LP34931 641 aa23.14■■□□□ 1.29
CHERP-202ENST00000544299 TOGARAM1Q9Y4F4 1720 aa23.13■■□□□ 1.29
CHERP-202ENST00000544299 SPATA31A1Q5TZJ5 1347 aa23.13■■□□□ 1.29
CHERP-202ENST00000544299 SPATA31A6Q5VVP1 1343 aa23.13■■□□□ 1.29
CHERP-202ENST00000544299 RGS12O14924 1447 aa23.12■■□□□ 1.29
CHERP-202ENST00000544299 MVPQ14764 893 aaKnown RBP23.12■■□□□ 1.29
CHERP-202ENST00000544299 FTSJ3Q8IY81 847 aaKnown RBP23.12■■□□□ 1.29
CHERP-202ENST00000544299 NFATC2IPQ8NCF5 419 aa23.11■■□□□ 1.29
CHERP-202ENST00000544299 HOXB7P09629 217 aa23.1■■□□□ 1.29
CHERP-202ENST00000544299 SPATA31A5Q5VU36 1347 aa23.1■■□□□ 1.29
CHERP-202ENST00000544299 SPATA31A7Q8IWB4 1347 aa23.1■■□□□ 1.29
CHERP-202ENST00000544299 BCL9LQ86UU0 1499 aa23.1■■□□□ 1.29
CHERP-202ENST00000544299 TMEM57Q8N5G2 664 aa23.09■■□□□ 1.29
CHERP-202ENST00000544299 DDX54Q8TDD1 881 aaKnown RBP23.09■■□□□ 1.29
CHERP-202ENST00000544299 ABCC4O15439 1325 aa23.09■■□□□ 1.29
CHERP-202ENST00000544299 GLI3P10071 1580 aa23.09■■□□□ 1.29
CHERP-202ENST00000544299 CACNA1FO60840 1977 aa23.08■■□□□ 1.29
CHERP-202ENST00000544299 PAPPAQ13219 1627 aa23.08■■□□□ 1.29
CHERP-202ENST00000544299 TNS2Q63HR2 1409 aa23.08■■□□□ 1.29
CHERP-202ENST00000544299 C5P01031 1676 aa23.07■■□□□ 1.28
CHERP-202ENST00000544299 SLC4A2P04920 1241 aa23.07■■□□□ 1.28
CHERP-202ENST00000544299 SLC39A6Q13433 755 aa23.07■■□□□ 1.28
CHERP-202ENST00000544299 CCDC30Q5VVM6 783 aa23.07■■□□□ 1.28
CHERP-202ENST00000544299 THRAP3Q9Y2W1 955 aaKnown RBP23.07■■□□□ 1.28
CHERP-202ENST00000544299 ERVV-2B6SEH9 535 aa23.06■■□□□ 1.28
CHERP-202ENST00000544299 CABP4P57796 275 aa23.06■■□□□ 1.28
CHERP-202ENST00000544299 ZNF790Q6PG37 636 aa23.06■■□□□ 1.28
CHERP-202ENST00000544299 G2E3Q7L622 706 aa23.06■■□□□ 1.28
CHERP-202ENST00000544299 UNC5CLQ8IV45 518 aa23.06■■□□□ 1.28
CHERP-202ENST00000544299 C8orf37Q96NL8 207 aa23.06■■□□□ 1.28
CHERP-202ENST00000544299 API5Q9BZZ5 524 aaKnown RBP23.06■■□□□ 1.28
CHERP-202ENST00000544299 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.06■■□□□ 1.28
CHERP-202ENST00000544299 NECTIN2Q92692 538 aa23.06■■□□□ 1.28
CHERP-202ENST00000544299 GIGYF1O75420 1035 aaPredicted RBP23.05■■□□□ 1.28
CHERP-202ENST00000544299 HDGFL1Q5TGJ6 251 aa23.05■■□□□ 1.28
CHERP-202ENST00000544299 FNBP4Q8N3X1 1017 aaPredicted RBP23.05■■□□□ 1.28
CHERP-202ENST00000544299 PTPRCP08575 1304 aa23.04■■□□□ 1.28
CHERP-202ENST00000544299 ITPRIPQ8IWB1 547 aa23.04■■□□□ 1.28
CHERP-202ENST00000544299 NGLY1Q96IV0 654 aa23.04■■□□□ 1.28
CHERP-202ENST00000544299 UBR2Q8IWV8 1755 aa23.04■■□□□ 1.28
CHERP-202ENST00000544299 AAMPQ13685 434 aa23.04■■□□□ 1.28
CHERP-202ENST00000544299 CDCA7Q9BWT1 371 aaPredicted RBP23.04■■□□□ 1.28
CHERP-202ENST00000544299 STK31Q9BXU1 1019 aa23.04■■□□□ 1.28
CHERP-202ENST00000544299 RBM19Q9Y4C8 960 aaKnown RBP23.04■■□□□ 1.28
CHERP-202ENST00000544299 KDM2BQ8NHM5 1336 aa23.02■■□□□ 1.28
CHERP-202ENST00000544299 PRAMEF22A3QJZ6 481 aa23.02■■□□□ 1.28
CHERP-202ENST00000544299 BARGINQ6ZT62 677 aa23.02■■□□□ 1.28
CHERP-202ENST00000544299 DDX19BQ9UMR2 479 aa23.02■■□□□ 1.28
CHERP-202ENST00000544299 VPS72Q15906 364 aa23.01■■□□□ 1.27
CHERP-202ENST00000544299 ZNF496Q96IT1 587 aaPredicted RBP23.01■■□□□ 1.27
CHERP-202ENST00000544299 EXOC5O00471 708 aa23.01■■□□□ 1.27
CHERP-202ENST00000544299 ITGB4P16144 1822 aa23■■□□□ 1.27
CHERP-202ENST00000544299 KCPQ6ZWJ8 1503 aa23■■□□□ 1.27
CHERP-202ENST00000544299 EIF2S2P20042 333 aaKnown RBP23■■□□□ 1.27
CHERP-202ENST00000544299 FLIIQ13045 1269 aa22.99■■□□□ 1.27
CHERP-202ENST00000544299 PCDHB15Q9Y5E8 787 aa22.99■■□□□ 1.27
CHERP-202ENST00000544299 CHPF2Q9P2E5 772 aa22.99■■□□□ 1.27
CHERP-202ENST00000544299 CCDC9Q9Y3X0 531 aaKnown RBP22.99■■□□□ 1.27
CHERP-202ENST00000544299 INTS3Q68E01 1043 aaKnown RBP22.98■■□□□ 1.27
CHERP-202ENST00000544299 ZBTB40Q9NUA8 1239 aa22.98■■□□□ 1.27
CHERP-202ENST00000544299 LAMB4A4D0S4 1761 aa22.98■■□□□ 1.27
CHERP-202ENST00000544299 N4BP2Q86UW6 1770 aaPredicted RBP22.98■■□□□ 1.27
CHERP-202ENST00000544299 TTC5Q8N0Z6 440 aa22.97■■□□□ 1.27
CHERP-202ENST00000544299 CHMP4AQ9BY43 222 aa22.96■■□□□ 1.27
CHERP-202ENST00000544299 DOT1LQ8TEK3 1739 aa22.96■■□□□ 1.27
CHERP-202ENST00000544299 FMNL2Q96PY5 1086 aa22.96■■□□□ 1.27
CHERP-202ENST00000544299 PHAXQ9H814 394 aaKnown RBP22.96■■□□□ 1.27
CHERP-202ENST00000544299 USP21Q9UK80 565 aa22.96■■□□□ 1.27
CHERP-202ENST00000544299 ZBTB7BO15156 539 aaPredicted RBP22.95■■□□□ 1.26
CHERP-202ENST00000544299 DDB1Q16531 1140 aa22.95■■□□□ 1.26
CHERP-202ENST00000544299 F6X3S4 739 aa22.94■■□□□ 1.26
CHERP-202ENST00000544299 IGHDP01880 384 aa22.94■■□□□ 1.26
CHERP-202ENST00000544299 PROSER3Q2NL68 480 aa22.94■■□□□ 1.26
CHERP-202ENST00000544299 ANXA1P04083 346 aa22.94■■□□□ 1.26
CHERP-202ENST00000544299 SNRPA1P09661 255 aaKnown RBP22.94■■□□□ 1.26
CHERP-202ENST00000544299 CENPQQ7L2Z9 268 aaPredicted RBP22.94■■□□□ 1.26
CHERP-202ENST00000544299 TMOD3Q9NYL9 352 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms