RNA–Protein interactions for RNA: ENST00000544004.1

AP000439.1-201, humanhuman

TSL 4 BASIC

Gene AP000439.1, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.1-201ENST00000544004 ITPK1Q13572 414 aa15.94■□□□□ 0.14
AP000439.1-201ENST00000544004 C9orf131Q5VYM1 1079 aa15.94■□□□□ 0.14
AP000439.1-201ENST00000544004 C10orf71Q711Q0 1435 aa15.94■□□□□ 0.14
AP000439.1-201ENST00000544004 INSRP06213 1382 aa15.93■□□□□ 0.14
AP000439.1-201ENST00000544004 PLEKHG2Q9H7P9 1386 aa15.93■□□□□ 0.14
AP000439.1-201ENST00000544004 ATP6V1AP38606 617 aa15.93■□□□□ 0.14
AP000439.1-201ENST00000544004 GGNBP2Q9H3C7 697 aa15.93■□□□□ 0.14
AP000439.1-201ENST00000544004 ARFGEF1Q9Y6D6 1849 aa15.93■□□□□ 0.14
AP000439.1-201ENST00000544004 KCPQ6ZWJ8 1503 aa15.93■□□□□ 0.14
AP000439.1-201ENST00000544004 NKX1-1Q15270 411 aaPredicted RBP15.92■□□□□ 0.14
AP000439.1-201ENST00000544004 CCDC87Q9NVE4 849 aa15.92■□□□□ 0.14
AP000439.1-201ENST00000544004 ASAP1Q9ULH1 1129 aa15.92■□□□□ 0.14
AP000439.1-201ENST00000544004 KDM2BQ8NHM5 1336 aa15.92■□□□□ 0.14
AP000439.1-201ENST00000544004 C4AP0C0L4 1744 aa15.91■□□□□ 0.14
AP000439.1-201ENST00000544004 FYB1O15117 783 aa15.91■□□□□ 0.14
AP000439.1-201ENST00000544004 TMF1P82094 1093 aa15.91■□□□□ 0.14
AP000439.1-201ENST00000544004 TRAPPC3LQ5T215 181 aa15.91■□□□□ 0.14
AP000439.1-201ENST00000544004 NLGN1Q8N2Q7 840 aa15.91■□□□□ 0.14
AP000439.1-201ENST00000544004 RRAGCQ9HB90 399 aa15.91■□□□□ 0.14
AP000439.1-201ENST00000544004 TMOD3Q9NYL9 352 aa15.91■□□□□ 0.14
AP000439.1-201ENST00000544004 RTCBQ9Y3I0 505 aaKnown RBP15.9■□□□□ 0.14
AP000439.1-201ENST00000544004 TNRC6CQ9HCJ0 1690 aaKnown RBP15.89■□□□□ 0.13
AP000439.1-201ENST00000544004 FLT4P35916 1363 aa15.89■□□□□ 0.13
AP000439.1-201ENST00000544004 KCNA3P22001 575 aa15.89■□□□□ 0.13
AP000439.1-201ENST00000544004 RNF181Q9P0P0 153 aa15.88■□□□□ 0.13
AP000439.1-201ENST00000544004 SPG7Q9UQ90 795 aa15.88■□□□□ 0.13
AP000439.1-201ENST00000544004 PARP3Q9Y6F1 533 aa15.88■□□□□ 0.13
AP000439.1-201ENST00000544004 SBF1O95248 1867 aa15.87■□□□□ 0.13
AP000439.1-201ENST00000544004 SMC1BQ8NDV3 1235 aa15.87■□□□□ 0.13
AP000439.1-201ENST00000544004 TESK2Q96S53 571 aa15.87■□□□□ 0.13
AP000439.1-201ENST00000544004 ATG3Q9NT62 314 aa15.87■□□□□ 0.13
AP000439.1-201ENST00000544004 PIM2Q9P1W9 311 aa15.87■□□□□ 0.13
AP000439.1-201ENST00000544004 KIF20BQ96Q89 1820 aa15.87■□□□□ 0.13
AP000439.1-201ENST00000544004 KIF24Q5T7B8 1368 aa15.87■□□□□ 0.13
AP000439.1-201ENST00000544004 HSPA1AP0DMV8 641 aaKnown RBP15.86■□□□□ 0.13
AP000439.1-201ENST00000544004 HSPA1BP0DMV9 641 aaKnown RBP15.86■□□□□ 0.13
AP000439.1-201ENST00000544004 GYS1P13807 737 aa15.86■□□□□ 0.13
AP000439.1-201ENST00000544004 ARHGEF1Q92888 912 aaKnown RBP15.86■□□□□ 0.13
AP000439.1-201ENST00000544004 DCAF5Q96JK2 942 aa15.86■□□□□ 0.13
AP000439.1-201ENST00000544004 NCAPD2Q15021 1401 aa15.85■□□□□ 0.13
AP000439.1-201ENST00000544004 ST20-MTHFSA0A0A6YYL1 179 aa15.84■□□□□ 0.13
AP000439.1-201ENST00000544004 ADRA2BP18089 450 aa15.84■□□□□ 0.13
AP000439.1-201ENST00000544004 RFC4P35249 363 aa15.84■□□□□ 0.13
AP000439.1-201ENST00000544004 DALRD3Q5D0E6 543 aaKnown RBP15.84■□□□□ 0.13
AP000439.1-201ENST00000544004 COL5A3P25940 1745 aaPredicted RBP15.84■□□□□ 0.13
AP000439.1-201ENST00000544004 KDRP35968 1356 aa15.84■□□□□ 0.13
AP000439.1-201ENST00000544004 PHKG2P15735 406 aa15.83■□□□□ 0.12
AP000439.1-201ENST00000544004 IFNL2Q8IZJ0 200 aa15.83■□□□□ 0.12
AP000439.1-201ENST00000544004 SLC4A9Q96Q91 983 aa15.83■□□□□ 0.12
AP000439.1-201ENST00000544004 EMILIN1Q9Y6C2 1016 aa15.83■□□□□ 0.12
AP000439.1-201ENST00000544004 ZNF831Q5JPB2 1677 aa15.83■□□□□ 0.12
AP000439.1-201ENST00000544004 RC3H1Q5TC82 1133 aaKnown RBP15.82■□□□□ 0.12
AP000439.1-201ENST00000544004 RBM42Q9BTD8 480 aaKnown RBP15.82■□□□□ 0.12
AP000439.1-201ENST00000544004 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.82■□□□□ 0.12
AP000439.1-201ENST00000544004 RPS6KA4O75676 772 aa15.81■□□□□ 0.12
AP000439.1-201ENST00000544004 MYH14Q7Z406 1995 aaKnown RBP15.81■□□□□ 0.12
AP000439.1-201ENST00000544004 TONSLQ96HA7 1378 aa15.81■□□□□ 0.12
AP000439.1-201ENST00000544004 CNTNAP4Q9C0A0 1308 aa15.8■□□□□ 0.12
AP000439.1-201ENST00000544004 PPM1GO15355 546 aaPredicted RBP15.8■□□□□ 0.12
AP000439.1-201ENST00000544004 SLC24A1O60721 1099 aa15.8■□□□□ 0.12
AP000439.1-201ENST00000544004 CHRNA5P30532 468 aa15.8■□□□□ 0.12
AP000439.1-201ENST00000544004 EYA1Q99502 592 aa15.79■□□□□ 0.12
AP000439.1-201ENST00000544004 VEGFAP15692 232 aaPredicted RBP15.78■□□□□ 0.12
AP000439.1-201ENST00000544004 ANKRD26Q9UPS8 1709 aa15.77■□□□□ 0.12
AP000439.1-201ENST00000544004 ZC3H4Q9UPT8 1303 aaKnown RBP15.77■□□□□ 0.12
AP000439.1-201ENST00000544004 RASSF7Q02833 373 aa15.77■□□□□ 0.12
AP000439.1-201ENST00000544004 DDR1Q08345 913 aa15.77■□□□□ 0.12
AP000439.1-201ENST00000544004 FKBP8Q14318 412 aa15.77■□□□□ 0.12
AP000439.1-201ENST00000544004 SRP68Q9UHB9 627 aaKnown RBP15.77■□□□□ 0.12
AP000439.1-201ENST00000544004 CCDC88AQ3V6T2 1871 aa15.77■□□□□ 0.11
AP000439.1-201ENST00000544004 GLTPD2A6NH11 291 aa15.76■□□□□ 0.11
AP000439.1-201ENST00000544004 WASHC2AQ641Q2 1341 aa15.75■□□□□ 0.11
AP000439.1-201ENST00000544004 ERVV-2B6SEH9 535 aa15.75■□□□□ 0.11
AP000439.1-201ENST00000544004 KDM6AO15550 1401 aaPredicted RBP15.75■□□□□ 0.11
AP000439.1-201ENST00000544004 USP42Q9H9J4 1324 aaKnown RBP15.74■□□□□ 0.11
AP000439.1-201ENST00000544004 TIAM2Q8IVF5 1701 aa15.74■□□□□ 0.11
AP000439.1-201ENST00000544004 LMNB1P20700 586 aa15.73■□□□□ 0.11
AP000439.1-201ENST00000544004 POLRMTO00411 1230 aaKnown RBP15.72■□□□□ 0.11
AP000439.1-201ENST00000544004 CRKLP46109 303 aaKnown RBP15.72■□□□□ 0.11
AP000439.1-201ENST00000544004 CARD14Q9BXL6 1004 aa15.72■□□□□ 0.11
AP000439.1-201ENST00000544004 AFDNP55196 1824 aaKnown RBP15.71■□□□□ 0.11
AP000439.1-201ENST00000544004 PTCD1O75127 700 aaKnown RBP15.71■□□□□ 0.11
AP000439.1-201ENST00000544004 SLC34A2O95436 690 aa15.71■□□□□ 0.11
AP000439.1-201ENST00000544004 HSP90AB1P08238 724 aaKnown RBP15.71■□□□□ 0.11
AP000439.1-201ENST00000544004 TM4SF1P30408 202 aa15.71■□□□□ 0.11
AP000439.1-201ENST00000544004 CABP4P57796 275 aa15.71■□□□□ 0.11
AP000439.1-201ENST00000544004 POTECB2RU33 542 aa15.7■□□□□ 0.1
AP000439.1-201ENST00000544004 MKRN1Q9UHC7 482 aaKnown RBP15.7■□□□□ 0.1
AP000439.1-201ENST00000544004 TJP1Q07157 1748 aa15.7■□□□□ 0.1
AP000439.1-201ENST00000544004 ADAMTS7Q9UKP4 1686 aa15.7■□□□□ 0.1
AP000439.1-201ENST00000544004 DLEC1Q9Y238 1755 aa15.7■□□□□ 0.1
AP000439.1-201ENST00000544004 EIF4A2Q14240 407 aaKnown RBP15.69■□□□□ 0.1
AP000439.1-201ENST00000544004 POLKQ9UBT6 870 aa15.69■□□□□ 0.1
AP000439.1-201ENST00000544004 FOXN1O15353 648 aa15.67■□□□□ 0.1
AP000439.1-201ENST00000544004 ZPR1O75312 459 aa15.67■□□□□ 0.1
AP000439.1-201ENST00000544004 USPL1Q5W0Q7 1092 aa15.67■□□□□ 0.1
AP000439.1-201ENST00000544004 DPY19L2Q6NUT2 758 aa15.67■□□□□ 0.1
AP000439.1-201ENST00000544004 TTLL6Q8N841 843 aa15.67■□□□□ 0.1
AP000439.1-201ENST00000544004 CREBZFQ9NS37 354 aa15.67■□□□□ 0.1
AP000439.1-201ENST00000544004 NRXN2Q9P2S2 1712 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms