RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 HSP90AB1P08238 724 aaKnown RBP31.09■■■□□ 2.57
CDKN3-207ENST00000543789 ATP10DQ9P241 1426 aa31.08■■■□□ 2.57
CDKN3-207ENST00000543789 EIF4G2P78344 907 aaKnown RBP eCLIP31.08■■■□□ 2.57
CDKN3-207ENST00000543789 PLEKHO1Q53GL0 409 aaPredicted RBP31.07■■■□□ 2.56
CDKN3-207ENST00000543789 DCAF5Q96JK2 942 aa31.07■■■□□ 2.56
CDKN3-207ENST00000543789 WWC3Q9ULE0 1092 aa31.07■■■□□ 2.56
CDKN3-207ENST00000543789 TRAPPC3LQ5T215 181 aa31.06■■■□□ 2.56
CDKN3-207ENST00000543789 GPBP1L1Q9HC44 474 aaPredicted RBP31.06■■■□□ 2.56
CDKN3-207ENST00000543789 RTCBQ9Y3I0 505 aaKnown RBP31.06■■■□□ 2.56
CDKN3-207ENST00000543789 MAP2P11137 1827 aaKnown RBP31.05■■■□□ 2.56
CDKN3-207ENST00000543789 RBM42Q9BTD8 480 aaKnown RBP31.05■■■□□ 2.56
CDKN3-207ENST00000543789 MMP10P09238 476 aa31.04■■■□□ 2.56
CDKN3-207ENST00000543789 HSPA5P11021 654 aaKnown RBP31.04■■■□□ 2.56
CDKN3-207ENST00000543789 UBR3Q6ZT12 1888 aa31.04■■■□□ 2.56
CDKN3-207ENST00000543789 AMOTQ4VCS5 1084 aa31.03■■■□□ 2.56
CDKN3-207ENST00000543789 SLC4A9Q96Q91 983 aa31.03■■■□□ 2.56
CDKN3-207ENST00000543789 RC3H1Q5TC82 1133 aaKnown RBP31.02■■■□□ 2.56
CDKN3-207ENST00000543789 CABP4P57796 275 aa31.01■■■□□ 2.55
CDKN3-207ENST00000543789 ZNF530Q6P9A1 599 aaPredicted RBP31.01■■■□□ 2.55
CDKN3-207ENST00000543789 NLGN1Q8N2Q7 840 aa31.01■■■□□ 2.55
CDKN3-207ENST00000543789 KDRP35968 1356 aa31■■■□□ 2.55
CDKN3-207ENST00000543789 MORC1Q86VD1 984 aa30.99■■■□□ 2.55
CDKN3-207ENST00000543789 ZNF526Q8TF50 670 aaPredicted RBP30.99■■■□□ 2.55
CDKN3-207ENST00000543789 ARHGEF1Q92888 912 aaKnown RBP30.99■■■□□ 2.55
CDKN3-207ENST00000543789 ADCY9O60503 1353 aa30.99■■■□□ 2.55
CDKN3-207ENST00000543789 ADRA2BP18089 450 aa30.98■■■□□ 2.55
CDKN3-207ENST00000543789 MTHFSP49914 203 aa30.98■■■□□ 2.55
CDKN3-207ENST00000543789 RPS6KA4O75676 772 aa30.96■■■□□ 2.55
CDKN3-207ENST00000543789 TGFB2P61812 414 aa30.96■■■□□ 2.55
CDKN3-207ENST00000543789 RFC4P35249 363 aa30.95■■■□□ 2.55
CDKN3-207ENST00000543789 C1orf141Q5JVX7 400 aa30.95■■■□□ 2.55
CDKN3-207ENST00000543789 AEBP1Q8IUX7 1158 aa30.95■■■□□ 2.55
CDKN3-207ENST00000543789 CNTNAP4Q9C0A0 1308 aa30.95■■■□□ 2.54
CDKN3-207ENST00000543789 KDM6AO15550 1401 aaPredicted RBP30.92■■■□□ 2.54
CDKN3-207ENST00000543789 PTCD1O75127 700 aaKnown RBP30.91■■■□□ 2.54
CDKN3-207ENST00000543789 GYS1P13807 737 aa30.91■■■□□ 2.54
CDKN3-207ENST00000543789 SULT6B1Q6IMI4 303 aa30.91■■■□□ 2.54
CDKN3-207ENST00000543789 NFATC2IPQ8NCF5 419 aa30.91■■■□□ 2.54
CDKN3-207ENST00000543789 CCDC87Q9NVE4 849 aa30.91■■■□□ 2.54
CDKN3-207ENST00000543789 KNSTRNQ9Y448 316 aa30.91■■■□□ 2.54
CDKN3-207ENST00000543789 A0A0G2JLW4 131 aa30.9■■■□□ 2.54
CDKN3-207ENST00000543789 PARP3Q9Y6F1 533 aa30.9■■■□□ 2.54
CDKN3-207ENST00000543789 BCS1LQ9Y276 419 aa30.89■■■□□ 2.54
CDKN3-207ENST00000543789 PXDNLA1KZ92 1463 aa30.88■■■□□ 2.53
CDKN3-207ENST00000543789 IL13P35225 146 aa30.87■■■□□ 2.53
CDKN3-207ENST00000543789 DPEP1P16444 411 aa30.85■■■□□ 2.53
CDKN3-207ENST00000543789 HSPA6P17066 643 aa30.85■■■□□ 2.53
CDKN3-207ENST00000543789 CRKLP46109 303 aaKnown RBP30.85■■■□□ 2.53
CDKN3-207ENST00000543789 C10orf71Q711Q0 1435 aa30.84■■■□□ 2.53
CDKN3-207ENST00000543789 CICQ96RK0 1608 aaPredicted RBP30.84■■■□□ 2.53
CDKN3-207ENST00000543789 ARHGAP27Q6ZUM4 889 aa30.83■■■□□ 2.53
CDKN3-207ENST00000543789 CEP350Q5VT06 3117 aa30.83■■■□□ 2.53
CDKN3-207ENST00000543789 ZNF831Q5JPB2 1677 aa30.81■■■□□ 2.52
CDKN3-207ENST00000543789 KIF3CO14782 793 aa30.81■■■□□ 2.52
CDKN3-207ENST00000543789 FCHSD2O94868 740 aa30.81■■■□□ 2.52
CDKN3-207ENST00000543789 CCER1Q8TC90 406 aaPredicted RBP30.81■■■□□ 2.52
CDKN3-207ENST00000543789 AKAP4Q5JQC9 854 aa30.8■■■□□ 2.52
CDKN3-207ENST00000543789 SRP68Q9UHB9 627 aaKnown RBP30.79■■■□□ 2.52
CDKN3-207ENST00000543789 FKBP8Q14318 412 aa30.78■■■□□ 2.52
CDKN3-207ENST00000543789 AMER1Q5JTC6 1135 aaPredicted RBP30.78■■■□□ 2.52
CDKN3-207ENST00000543789 KCNA3P22001 575 aa30.77■■■□□ 2.52
CDKN3-207ENST00000543789 USP42Q9H9J4 1324 aaKnown RBP30.76■■■□□ 2.52
CDKN3-207ENST00000543789 INTS5Q6P9B9 1019 aaKnown RBP30.76■■■□□ 2.51
CDKN3-207ENST00000543789 SLC52A2Q9HAB3 445 aa30.75■■■□□ 2.51
CDKN3-207ENST00000543789 LGR6Q9HBX8 967 aa30.75■■■□□ 2.51
CDKN3-207ENST00000543789 PIM2Q9P1W9 311 aa30.75■■■□□ 2.51
CDKN3-207ENST00000543789 DNAJC10Q8IXB1 793 aa30.73■■■□□ 2.51
CDKN3-207ENST00000543789 KIF13BQ9NQT8 1826 aa30.73■■■□□ 2.51
CDKN3-207ENST00000543789 COL5A3P25940 1745 aaPredicted RBP30.73■■■□□ 2.51
CDKN3-207ENST00000543789 DDR1Q08345 913 aa30.72■■■□□ 2.51
CDKN3-207ENST00000543789 C4AP0C0L4 1744 aa30.72■■■□□ 2.51
CDKN3-207ENST00000543789 RNMTO43148 476 aaKnown RBP30.7■■■□□ 2.51
CDKN3-207ENST00000543789 ZPR1O75312 459 aa30.7■■■□□ 2.51
CDKN3-207ENST00000543789 HMOX1P09601 288 aa30.7■■■□□ 2.51
CDKN3-207ENST00000543789 TM4SF1P30408 202 aa30.7■■■□□ 2.51
CDKN3-207ENST00000543789 DALRD3Q5D0E6 543 aaKnown RBP30.7■■■□□ 2.51
CDKN3-207ENST00000543789 MYH14Q7Z406 1995 aaKnown RBP30.69■■■□□ 2.5
CDKN3-207ENST00000543789 TOMM70O94826 608 aa30.69■■■□□ 2.5
CDKN3-207ENST00000543789 KIAA1551Q9HCM1 1747 aa30.69■■■□□ 2.5
CDKN3-207ENST00000543789 N4BP2Q86UW6 1770 aaPredicted RBP30.69■■■□□ 2.5
CDKN3-207ENST00000543789 SLC39A6Q13433 755 aa30.68■■■□□ 2.5
CDKN3-207ENST00000543789 IFFO2Q5TF58 517 aa30.68■■■□□ 2.5
CDKN3-207ENST00000543789 C9orf131Q5VYM1 1079 aa30.68■■■□□ 2.5
CDKN3-207ENST00000543789 KIF7Q2M1P5 1343 aa30.68■■■□□ 2.5
CDKN3-207ENST00000543789 POLRMTO00411 1230 aaKnown RBP30.67■■■□□ 2.5
CDKN3-207ENST00000543789 CYP19A1P11511 503 aaPredicted RBP30.67■■■□□ 2.5
CDKN3-207ENST00000543789 USPL1Q5W0Q7 1092 aa30.67■■■□□ 2.5
CDKN3-207ENST00000543789 SOS1Q07889 1333 aaPredicted RBP30.66■■■□□ 2.5
CDKN3-207ENST00000543789 DIAPH1O60610 1272 aaKnown RBP30.65■■■□□ 2.5
CDKN3-207ENST00000543789 CHRNA5P30532 468 aa30.65■■■□□ 2.5
CDKN3-207ENST00000543789 MTHFSDQ2M296 383 aaKnown RBP30.65■■■□□ 2.5
CDKN3-207ENST00000543789 NMRK2Q9NPI5 230 aa30.65■■■□□ 2.5
CDKN3-207ENST00000543789 PER1O15534 1290 aaPredicted RBP30.64■■■□□ 2.5
CDKN3-207ENST00000543789 APLP1P51693 650 aa30.63■■■□□ 2.49
CDKN3-207ENST00000543789 CC2D1BQ5T0F9 858 aaKnown RBP30.62■■■□□ 2.49
CDKN3-207ENST00000543789 NARFQ9UHQ1 456 aa30.62■■■□□ 2.49
CDKN3-207ENST00000543789 VSIG10Q8N0Z9 540 aa30.61■■■□□ 2.49
CDKN3-207ENST00000543789 NFIXQ14938 502 aa30.59■■■□□ 2.49
CDKN3-207ENST00000543789 ZBTB1Q9Y2K1 713 aa30.59■■■□□ 2.49
CDKN3-207ENST00000543789 TJP1Q07157 1748 aa30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms