RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-213ENST00000543324 C4BP0C0L5 1744 aa9.34□□□□□ -0.92
CIT-213ENST00000543324 VCANP13611 3396 aa9.33□□□□□ -0.92
CIT-213ENST00000543324 SPTBN5Q9NRC6 3674 aaKnown RBP9.33□□□□□ -0.92
CIT-213ENST00000543324 LMNB1P20700 586 aa9.33□□□□□ -0.92
CIT-213ENST00000543324 RASSF7Q02833 373 aa9.33□□□□□ -0.92
CIT-213ENST00000543324 ECE1P42892 770 aa9.32□□□□□ -0.92
CIT-213ENST00000543324 DALRD3Q5D0E6 543 aaKnown RBP9.32□□□□□ -0.92
CIT-213ENST00000543324 NLRP13Q86W25 1043 aa9.32□□□□□ -0.92
CIT-213ENST00000543324 LDHDQ86WU2 507 aa9.32□□□□□ -0.92
CIT-213ENST00000543324 PIM2Q9P1W9 311 aa9.32□□□□□ -0.92
CIT-213ENST00000543324 COLQQ9Y215 455 aaPredicted RBP9.32□□□□□ -0.92
CIT-213ENST00000543324 POLR3AO14802 1390 aaPredicted RBP9.32□□□□□ -0.92
CIT-213ENST00000543324 ANKRD36BQ8N2N9 1353 aa9.32□□□□□ -0.92
CIT-213ENST00000543324 MINK1Q8N4C8 1332 aaPredicted RBP9.31□□□□□ -0.92
CIT-213ENST00000543324 MMP10P09238 476 aa9.31□□□□□ -0.92
CIT-213ENST00000543324 CPSF1Q10570 1443 aaKnown RBP9.31□□□□□ -0.92
CIT-213ENST00000543324 NSD3Q9BZ95 1437 aa9.31□□□□□ -0.92
CIT-213ENST00000543324 ADAMTSL1Q8N6G6 1762 aa9.3□□□□□ -0.92
CIT-213ENST00000543324 MAP2K2P36507 400 aa9.3□□□□□ -0.92
CIT-213ENST00000543324 DCAF11Q8TEB1 546 aa9.3□□□□□ -0.92
CIT-213ENST00000543324 PRDM6Q9NQX0 595 aa9.3□□□□□ -0.92
CIT-213ENST00000543324 ABT1Q9ULW3 272 aaKnown RBP9.3□□□□□ -0.92
CIT-213ENST00000543324 RANBP2P49792 3224 aaKnown RBP9.29□□□□□ -0.92
CIT-213ENST00000543324 C4AP0C0L4 1744 aa9.29□□□□□ -0.92
CIT-213ENST00000543324 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.29□□□□□ -0.92
CIT-213ENST00000543324 CSB-PGBD3P0DP91 1061 aa9.29□□□□□ -0.92
CIT-213ENST00000543324 PRIM1P49642 420 aaKnown RBP9.29□□□□□ -0.92
CIT-213ENST00000543324 CYP4F22Q6NT55 531 aa9.29□□□□□ -0.92
CIT-213ENST00000543324 DPY19L2Q6NUT2 758 aa9.29□□□□□ -0.92
CIT-213ENST00000543324 SYTL4Q96C24 671 aaPredicted RBP9.29□□□□□ -0.92
CIT-213ENST00000543324 USP47Q96K76 1375 aa9.28□□□□□ -0.92
CIT-213ENST00000543324 WASLO00401 505 aaPredicted RBP9.28□□□□□ -0.92
CIT-213ENST00000543324 PHF14O94880 888 aa9.28□□□□□ -0.92
CIT-213ENST00000543324 HMGB2P26583 209 aaKnown RBP9.28□□□□□ -0.92
CIT-213ENST00000543324 BRCA2P51587 3418 aa9.27□□□□□ -0.92
CIT-213ENST00000543324 DICER1Q9UPY3 1922 aaKnown RBP9.27□□□□□ -0.93
CIT-213ENST00000543324 SCN4AP35499 1836 aa9.27□□□□□ -0.93
CIT-213ENST00000543324 AOC2O75106 756 aa9.27□□□□□ -0.93
CIT-213ENST00000543324 IL2RBP14784 551 aa9.27□□□□□ -0.93
CIT-213ENST00000543324 AK7Q96M32 723 aa9.27□□□□□ -0.93
CIT-213ENST00000543324 CCDC87Q9NVE4 849 aa9.27□□□□□ -0.93
CIT-213ENST00000543324 POGKQ9P215 609 aa9.27□□□□□ -0.93
CIT-213ENST00000543324 TRAK1Q9UPV9 953 aa9.27□□□□□ -0.93
CIT-213ENST00000543324 ACEP12821 1306 aa9.27□□□□□ -0.93
CIT-213ENST00000543324 MON2Q7Z3U7 1717 aa9.26□□□□□ -0.93
CIT-213ENST00000543324 COL9A1P20849 921 aa9.26□□□□□ -0.93
CIT-213ENST00000543324 SSFA2P28290 1259 aa9.26□□□□□ -0.93
CIT-213ENST00000543324 PLA2G5P39877 138 aa9.26□□□□□ -0.93
CIT-213ENST00000543324 BRPF1P55201 1214 aaPredicted RBP9.26□□□□□ -0.93
CIT-213ENST00000543324 GRM1Q13255 1194 aa9.26□□□□□ -0.93
CIT-213ENST00000543324 PAXIP1Q6ZW49 1069 aaPredicted RBP9.26□□□□□ -0.93
CIT-213ENST00000543324 KDM2AQ9Y2K7 1162 aa9.26□□□□□ -0.93
CIT-213ENST00000543324 CEP290O15078 2479 aa9.26□□□□□ -0.93
CIT-213ENST00000543324 SNX27Q96L92 541 aa9.25□□□□□ -0.93
CIT-213ENST00000543324 HPS5Q9UPZ3 1129 aa9.25□□□□□ -0.93
CIT-213ENST00000543324 NUDT16Q96DE0 195 aaKnown RBP9.24□□□□□ -0.93
CIT-213ENST00000543324 IQCA1LA6NCM1 817 aa9.23□□□□□ -0.93
CIT-213ENST00000543324 NBPF1Q3BBV0 1214 aa9.23□□□□□ -0.93
CIT-213ENST00000543324 ARHGEF25Q86VW2 580 aa9.23□□□□□ -0.93
CIT-213ENST00000543324 TAF1DQ9H5J8 278 aaPredicted RBP9.23□□□□□ -0.93
CIT-213ENST00000543324 CNTROBQ8N137 903 aa9.22□□□□□ -0.93
CIT-213ENST00000543324 PLEKHG3A1L390 1219 aa9.21□□□□□ -0.94
CIT-213ENST00000543324 NFKBIEO00221 500 aa9.21□□□□□ -0.94
CIT-213ENST00000543324 DDNO94850 711 aaPredicted RBP9.21□□□□□ -0.94
CIT-213ENST00000543324 CTU1Q7Z7A3 348 aaKnown RBP9.21□□□□□ -0.94
CIT-213ENST00000543324 DDX54Q8TDD1 881 aaKnown RBP9.21□□□□□ -0.94
CIT-213ENST00000543324 L3MBTL2Q969R5 705 aa9.21□□□□□ -0.94
CIT-213ENST00000543324 OTUD5Q96G74 571 aa9.21□□□□□ -0.94
CIT-213ENST00000543324 DDX21Q9NR30 783 aaKnown RBP eCLIP9.21□□□□□ -0.94
CIT-213ENST00000543324 SBNO2Q9Y2G9 1366 aa9.21□□□□□ -0.94
CIT-213ENST00000543324 TRPM7Q96QT4 1865 aa9.21□□□□□ -0.94
CIT-213ENST00000543324 LAMA3Q16787 3333 aa9.2□□□□□ -0.94
CIT-213ENST00000543324 CHRNA5P30532 468 aa9.2□□□□□ -0.94
CIT-213ENST00000543324 MAP1SQ66K74 1059 aaPredicted RBP9.2□□□□□ -0.94
CIT-213ENST00000543324 CIAPIN1Q6FI81 312 aa9.2□□□□□ -0.94
CIT-213ENST00000543324 L3MBTL3Q96JM7 780 aaPredicted RBP9.2□□□□□ -0.94
CIT-213ENST00000543324 TLL2Q9Y6L7 1015 aa9.2□□□□□ -0.94
CIT-213ENST00000543324 CENPJQ9HC77 1338 aaPredicted RBP9.2□□□□□ -0.94
CIT-213ENST00000543324 PALLDQ8WX93 1383 aa9.2□□□□□ -0.94
CIT-213ENST00000543324 LAMB4A4D0S4 1761 aa9.19□□□□□ -0.94
CIT-213ENST00000543324 NLRP6P59044 892 aa9.19□□□□□ -0.94
CIT-213ENST00000543324 CACNB1Q02641 598 aaPredicted RBP9.19□□□□□ -0.94
CIT-213ENST00000543324 EAPPQ56P03 285 aaPredicted RBP9.19□□□□□ -0.94
CIT-213ENST00000543324 NLGN1Q8N2Q7 840 aa9.19□□□□□ -0.94
CIT-213ENST00000543324 FAM122AQ96E09 287 aa9.19□□□□□ -0.94
CIT-213ENST00000543324 CDK19Q9BWU1 502 aa9.19□□□□□ -0.94
CIT-213ENST00000543324 MUC3AQ02505 3323 aa9.18□□□□□ -0.94
CIT-213ENST00000543324 ERFEQ4G0M1 354 aa9.18□□□□□ -0.94
CIT-213ENST00000543324 SIN3AQ96ST3 1273 aa9.18□□□□□ -0.94
CIT-213ENST00000543324 DLEC1Q9Y238 1755 aa9.18□□□□□ -0.94
CIT-213ENST00000543324 CLEC11AQ9Y240 323 aa9.18□□□□□ -0.94
CIT-213ENST00000543324 CCDC61Q9Y6R9 512 aa9.18□□□□□ -0.94
CIT-213ENST00000543324 NFAT5O94916 1531 aa9.17□□□□□ -0.94
CIT-213ENST00000543324 TMF1P82094 1093 aa9.17□□□□□ -0.94
CIT-213ENST00000543324 NLRP2Q9NX02 1062 aa9.17□□□□□ -0.94
CIT-213ENST00000543324 RAPGEFL1Q9UHV5 662 aa9.17□□□□□ -0.94
CIT-213ENST00000543324 PARP3Q9Y6F1 533 aa9.17□□□□□ -0.94
CIT-213ENST00000543324 MAP2P11137 1827 aaKnown RBP9.17□□□□□ -0.94
CIT-213ENST00000543324 LTN1O94822 1766 aa9.17□□□□□ -0.94
CIT-213ENST00000543324 CD163L1Q9NR16 1453 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms