RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 ZNF530Q6P9A1 599 aaPredicted RBP16.46■□□□□ 0.23
PTPN6-220ENST00000543115 DCAF5Q96JK2 942 aa16.46■□□□□ 0.23
PTPN6-220ENST00000543115 SLC4A9Q96Q91 983 aa16.46■□□□□ 0.23
PTPN6-220ENST00000543115 KDRP35968 1356 aa16.46■□□□□ 0.23
PTPN6-220ENST00000543115 UTRNP46939 3433 aa16.46■□□□□ 0.23
PTPN6-220ENST00000543115 UBR3Q6ZT12 1888 aa16.46■□□□□ 0.22
PTPN6-220ENST00000543115 ERVV-2B6SEH9 535 aa16.45■□□□□ 0.22
PTPN6-220ENST00000543115 AMOTQ4VCS5 1084 aa16.45■□□□□ 0.22
PTPN6-220ENST00000543115 PELP1Q8IZL8 1130 aaKnown RBP16.45■□□□□ 0.22
PTPN6-220ENST00000543115 HSP90AB1P08238 724 aaKnown RBP16.44■□□□□ 0.22
PTPN6-220ENST00000543115 SSFA2P28290 1259 aa16.44■□□□□ 0.22
PTPN6-220ENST00000543115 ZNF784Q8NCA9 323 aaPredicted RBP16.44■□□□□ 0.22
PTPN6-220ENST00000543115 GNPATO15228 680 aa16.43■□□□□ 0.22
PTPN6-220ENST00000543115 MTHFSP49914 203 aa16.43■□□□□ 0.22
PTPN6-220ENST00000543115 YBX3P16989 372 aaKnown RBP eCLIP16.42■□□□□ 0.22
PTPN6-220ENST00000543115 CABP4P57796 275 aa16.42■□□□□ 0.22
PTPN6-220ENST00000543115 CC2D1BQ5T0F9 858 aaKnown RBP16.42■□□□□ 0.22
PTPN6-220ENST00000543115 RBM42Q9BTD8 480 aaKnown RBP16.42■□□□□ 0.22
PTPN6-220ENST00000543115 C1orf141Q5JVX7 400 aa16.4■□□□□ 0.22
PTPN6-220ENST00000543115 CD2APQ9Y5K6 639 aa16.4■□□□□ 0.22
PTPN6-220ENST00000543115 HMOX1P09601 288 aa16.39■□□□□ 0.21
PTPN6-220ENST00000543115 NFATC2IPQ8NCF5 419 aa16.39■□□□□ 0.21
PTPN6-220ENST00000543115 ZNF831Q5JPB2 1677 aa16.38■□□□□ 0.21
PTPN6-220ENST00000543115 PTCD1O75127 700 aaKnown RBP16.37■□□□□ 0.21
PTPN6-220ENST00000543115 CNGB1Q14028 1251 aaPredicted RBP16.37■□□□□ 0.21
PTPN6-220ENST00000543115 RTCBQ9Y3I0 505 aaKnown RBP16.37■□□□□ 0.21
PTPN6-220ENST00000543115 CHD4Q14839 1912 aa16.37■□□□□ 0.21
PTPN6-220ENST00000543115 COL5A3P25940 1745 aaPredicted RBP16.36■□□□□ 0.21
PTPN6-220ENST00000543115 AKAP4Q5JQC9 854 aa16.36■□□□□ 0.21
PTPN6-220ENST00000543115 LGR6Q9HBX8 967 aa16.36■□□□□ 0.21
PTPN6-220ENST00000543115 CNTNAP4Q9C0A0 1308 aa16.36■□□□□ 0.21
PTPN6-220ENST00000543115 DIAPH1O60610 1272 aaKnown RBP16.35■□□□□ 0.21
PTPN6-220ENST00000543115 TRAPPC3LQ5T215 181 aa16.35■□□□□ 0.21
PTPN6-220ENST00000543115 RC3H1Q5TC82 1133 aaKnown RBP16.35■□□□□ 0.21
PTPN6-220ENST00000543115 ARHGEF1Q92888 912 aaKnown RBP16.35■□□□□ 0.21
PTPN6-220ENST00000543115 NPC1L1Q9UHC9 1359 aa16.35■□□□□ 0.21
PTPN6-220ENST00000543115 COL3A1P02461 1466 aaPredicted RBP16.35■□□□□ 0.21
PTPN6-220ENST00000543115 GRIN3BO60391 1043 aa16.34■□□□□ 0.21
PTPN6-220ENST00000543115 RPS6KA4O75676 772 aa16.34■□□□□ 0.21
PTPN6-220ENST00000543115 MMP10P09238 476 aa16.34■□□□□ 0.21
PTPN6-220ENST00000543115 WWC3Q9ULE0 1092 aa16.34■□□□□ 0.21
PTPN6-220ENST00000543115 GOLGB1Q14789 3259 aaKnown RBP16.34■□□□□ 0.21
PTPN6-220ENST00000543115 SCN11AQ9UI33 1791 aa16.33■□□□□ 0.21
PTPN6-220ENST00000543115 MTHFSDQ2M296 383 aaKnown RBP16.33■□□□□ 0.2
PTPN6-220ENST00000543115 TJP1Q07157 1748 aa16.33■□□□□ 0.2
PTPN6-220ENST00000543115 RNMTO43148 476 aaKnown RBP16.32■□□□□ 0.2
PTPN6-220ENST00000543115 ADRA2BP18089 450 aa16.32■□□□□ 0.2
PTPN6-220ENST00000543115 MRC1P22897 1456 aa16.32■□□□□ 0.2
PTPN6-220ENST00000543115 CRKLP46109 303 aaKnown RBP16.32■□□□□ 0.2
PTPN6-220ENST00000543115 SLC52A2Q9HAB3 445 aa16.32■□□□□ 0.2
PTPN6-220ENST00000543115 GYS1P13807 737 aa16.31■□□□□ 0.2
PTPN6-220ENST00000543115 CICQ96RK0 1608 aaPredicted RBP16.3■□□□□ 0.2
PTPN6-220ENST00000543115 MYH14Q7Z406 1995 aaKnown RBP16.3■□□□□ 0.2
PTPN6-220ENST00000543115 RFC4P35249 363 aa16.3■□□□□ 0.2
PTPN6-220ENST00000543115 SLC39A6Q13433 755 aa16.3■□□□□ 0.2
PTPN6-220ENST00000543115 NLGN1Q8N2Q7 840 aa16.3■□□□□ 0.2
PTPN6-220ENST00000543115 C4AP0C0L4 1744 aa16.3■□□□□ 0.2
PTPN6-220ENST00000543115 ADAMTS7Q9UKP4 1686 aa16.3■□□□□ 0.2
PTPN6-220ENST00000543115 INTS5Q6P9B9 1019 aaKnown RBP16.29■□□□□ 0.2
PTPN6-220ENST00000543115 DNAJC10Q8IXB1 793 aa16.29■□□□□ 0.2
PTPN6-220ENST00000543115 SRP68Q9UHB9 627 aaKnown RBP16.29■□□□□ 0.2
PTPN6-220ENST00000543115 PXDNLA1KZ92 1463 aa16.29■□□□□ 0.2
PTPN6-220ENST00000543115 U2SURPO15042 1029 aaKnown RBP16.28■□□□□ 0.2
PTPN6-220ENST00000543115 KCPQ6ZWJ8 1503 aa16.28■□□□□ 0.2
PTPN6-220ENST00000543115 C10orf71Q711Q0 1435 aa16.28■□□□□ 0.2
PTPN6-220ENST00000543115 KIAA1551Q9HCM1 1747 aa16.27■□□□□ 0.19
PTPN6-220ENST00000543115 USP42Q9H9J4 1324 aaKnown RBP16.26■□□□□ 0.19
PTPN6-220ENST00000543115 KIF13BQ9NQT8 1826 aa16.25■□□□□ 0.19
PTPN6-220ENST00000543115 CYP19A1P11511 503 aaPredicted RBP16.25■□□□□ 0.19
PTPN6-220ENST00000543115 C1QTNF8P60827 252 aa16.25■□□□□ 0.19
PTPN6-220ENST00000543115 FKBP8Q14318 412 aa16.25■□□□□ 0.19
PTPN6-220ENST00000543115 CCDC87Q9NVE4 849 aa16.25■□□□□ 0.19
PTPN6-220ENST00000543115 ATP10DQ9P241 1426 aa16.25■□□□□ 0.19
PTPN6-220ENST00000543115 A0A0G2JLW4 131 aa16.24■□□□□ 0.19
PTPN6-220ENST00000543115 TGFB2P61812 414 aa16.24■□□□□ 0.19
PTPN6-220ENST00000543115 IL17REQ8NFR9 667 aa16.24■□□□□ 0.19
PTPN6-220ENST00000543115 PARP3Q9Y6F1 533 aa16.24■□□□□ 0.19
PTPN6-220ENST00000543115 ADCY9O60503 1353 aa16.24■□□□□ 0.19
PTPN6-220ENST00000543115 SOS1Q07889 1333 aaPredicted RBP16.23■□□□□ 0.19
PTPN6-220ENST00000543115 GIGYF1O75420 1035 aaPredicted RBP16.23■□□□□ 0.19
PTPN6-220ENST00000543115 DDR1Q08345 913 aa16.23■□□□□ 0.19
PTPN6-220ENST00000543115 ZBTB1Q9Y2K1 713 aa16.23■□□□□ 0.19
PTPN6-220ENST00000543115 VIRMAQ69YN4 1812 aaKnown RBP16.23■□□□□ 0.19
PTPN6-220ENST00000543115 DPEP1P16444 411 aa16.22■□□□□ 0.19
PTPN6-220ENST00000543115 GAS2L2Q8NHY3 880 aa16.22■□□□□ 0.19
PTPN6-220ENST00000543115 PHACTR3Q96KR7 559 aa16.22■□□□□ 0.19
PTPN6-220ENST00000543115 RSPH6AQ9H0K4 717 aa16.22■□□□□ 0.19
PTPN6-220ENST00000543115 N4BP2Q86UW6 1770 aaPredicted RBP16.22■□□□□ 0.19
PTPN6-220ENST00000543115 GNAT3A8MTJ3 354 aa16.21■□□□□ 0.19
PTPN6-220ENST00000543115 PPP2R1AP30153 589 aa16.21■□□□□ 0.19
PTPN6-220ENST00000543115 PRKAR2BP31323 418 aa16.21■□□□□ 0.19
PTPN6-220ENST00000543115 USPL1Q5W0Q7 1092 aa16.21■□□□□ 0.19
PTPN6-220ENST00000543115 BCS1LQ9Y276 419 aa16.21■□□□□ 0.19
PTPN6-220ENST00000543115 UBR2Q8IWV8 1755 aa16.21■□□□□ 0.18
PTPN6-220ENST00000543115 KCNA3P22001 575 aa16.2■□□□□ 0.18
PTPN6-220ENST00000543115 TM4SF1P30408 202 aa16.2■□□□□ 0.18
PTPN6-220ENST00000543115 VSIG10Q8N0Z9 540 aa16.2■□□□□ 0.18
PTPN6-220ENST00000543115 CFAP53Q96M91 514 aa16.2■□□□□ 0.18
PTPN6-220ENST00000543115 COL15A1P39059 1388 aa16.19■□□□□ 0.18
PTPN6-220ENST00000543115 POLRMTO00411 1230 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms