RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 YBX3P16989 372 aaKnown RBP eCLIP26.88■■□□□ 1.89
CACNA1C-230ENST00000543114 SSFA2P28290 1259 aa26.88■■□□□ 1.89
CACNA1C-230ENST00000543114 AEBP1Q8IUX7 1158 aa26.88■■□□□ 1.89
CACNA1C-230ENST00000543114 ATP6V1AP38606 617 aa26.87■■□□□ 1.89
CACNA1C-230ENST00000543114 KNSTRNQ9Y448 316 aa26.87■■□□□ 1.89
CACNA1C-230ENST00000543114 KIF7Q2M1P5 1343 aa26.86■■□□□ 1.89
CACNA1C-230ENST00000543114 GNPATO15228 680 aa26.85■■□□□ 1.89
CACNA1C-230ENST00000543114 PLEKHO1Q53GL0 409 aaPredicted RBP26.85■■□□□ 1.89
CACNA1C-230ENST00000543114 ZNF530Q6P9A1 599 aaPredicted RBP26.85■■□□□ 1.89
CACNA1C-230ENST00000543114 DCAF5Q96JK2 942 aa26.85■■□□□ 1.89
CACNA1C-230ENST00000543114 AMER1Q5JTC6 1135 aaPredicted RBP26.84■■□□□ 1.89
CACNA1C-230ENST00000543114 CD2APQ9Y5K6 639 aa26.84■■□□□ 1.89
CACNA1C-230ENST00000543114 ERVV-2B6SEH9 535 aa26.83■■□□□ 1.89
CACNA1C-230ENST00000543114 HSP90AB1P08238 724 aaKnown RBP26.83■■□□□ 1.89
CACNA1C-230ENST00000543114 AMOTQ4VCS5 1084 aa26.82■■□□□ 1.88
CACNA1C-230ENST00000543114 SLC4A9Q96Q91 983 aa26.82■■□□□ 1.88
CACNA1C-230ENST00000543114 SCN11AQ9UI33 1791 aa26.81■■□□□ 1.88
CACNA1C-230ENST00000543114 SULT6B1Q6IMI4 303 aa26.8■■□□□ 1.88
CACNA1C-230ENST00000543114 MYH14Q7Z406 1995 aaKnown RBP26.79■■□□□ 1.88
CACNA1C-230ENST00000543114 IL13P35225 146 aa26.79■■□□□ 1.88
CACNA1C-230ENST00000543114 C4AP0C0L4 1744 aa26.79■■□□□ 1.88
CACNA1C-230ENST00000543114 GRIN3BO60391 1043 aa26.78■■□□□ 1.88
CACNA1C-230ENST00000543114 RBM42Q9BTD8 480 aaKnown RBP26.78■■□□□ 1.88
CACNA1C-230ENST00000543114 VIRMAQ69YN4 1812 aaKnown RBP26.77■■□□□ 1.88
CACNA1C-230ENST00000543114 C1orf141Q5JVX7 400 aa26.77■■□□□ 1.88
CACNA1C-230ENST00000543114 TJP1Q07157 1748 aa26.76■■□□□ 1.88
CACNA1C-230ENST00000543114 CICQ96RK0 1608 aaPredicted RBP26.76■■□□□ 1.87
CACNA1C-230ENST00000543114 CABP4P57796 275 aa26.76■■□□□ 1.87
CACNA1C-230ENST00000543114 KIF13BQ9NQT8 1826 aa26.76■■□□□ 1.87
CACNA1C-230ENST00000543114 MTHFSP49914 203 aa26.75■■□□□ 1.87
CACNA1C-230ENST00000543114 KIAA1551Q9HCM1 1747 aa26.74■■□□□ 1.87
CACNA1C-230ENST00000543114 CNTNAP4Q9C0A0 1308 aa26.74■■□□□ 1.87
CACNA1C-230ENST00000543114 RTCBQ9Y3I0 505 aaKnown RBP26.73■■□□□ 1.87
CACNA1C-230ENST00000543114 PER1O15534 1290 aaPredicted RBP26.71■■□□□ 1.87
CACNA1C-230ENST00000543114 MMP10P09238 476 aa26.71■■□□□ 1.87
CACNA1C-230ENST00000543114 WWC3Q9ULE0 1092 aa26.71■■□□□ 1.87
CACNA1C-230ENST00000543114 MRC1P22897 1456 aa26.7■■□□□ 1.87
CACNA1C-230ENST00000543114 RC3H1Q5TC82 1133 aaKnown RBP26.7■■□□□ 1.86
CACNA1C-230ENST00000543114 NFATC2IPQ8NCF5 419 aa26.7■■□□□ 1.86
CACNA1C-230ENST00000543114 PTCD1O75127 700 aaKnown RBP26.69■■□□□ 1.86
CACNA1C-230ENST00000543114 C1QTNF8P60827 252 aa26.69■■□□□ 1.86
CACNA1C-230ENST00000543114 TRAPPC3LQ5T215 181 aa26.69■■□□□ 1.86
CACNA1C-230ENST00000543114 N4BP2Q86UW6 1770 aaPredicted RBP26.69■■□□□ 1.86
CACNA1C-230ENST00000543114 ADRA2BP18089 450 aa26.68■■□□□ 1.86
CACNA1C-230ENST00000543114 CC2D1BQ5T0F9 858 aaKnown RBP26.68■■□□□ 1.86
CACNA1C-230ENST00000543114 ARHGEF1Q92888 912 aaKnown RBP26.68■■□□□ 1.86
CACNA1C-230ENST00000543114 ADAMTS7Q9UKP4 1686 aa26.68■■□□□ 1.86
CACNA1C-230ENST00000543114 PXDNLA1KZ92 1463 aa26.68■■□□□ 1.86
CACNA1C-230ENST00000543114 C10orf71Q711Q0 1435 aa26.66■■□□□ 1.86
CACNA1C-230ENST00000543114 ATP10DQ9P241 1426 aa26.66■■□□□ 1.86
CACNA1C-230ENST00000543114 RPS6KA4O75676 772 aa26.66■■□□□ 1.86
CACNA1C-230ENST00000543114 HMOX1P09601 288 aa26.66■■□□□ 1.86
CACNA1C-230ENST00000543114 AKAP4Q5JQC9 854 aa26.66■■□□□ 1.86
CACNA1C-230ENST00000543114 ADCY9O60503 1353 aa26.66■■□□□ 1.86
CACNA1C-230ENST00000543114 COL3A1P02461 1466 aaPredicted RBP26.66■■□□□ 1.86
CACNA1C-230ENST00000543114 GIGYF1O75420 1035 aaPredicted RBP26.65■■□□□ 1.86
CACNA1C-230ENST00000543114 GYS1P13807 737 aa26.64■■□□□ 1.86
CACNA1C-230ENST00000543114 RFC4P35249 363 aa26.63■■□□□ 1.85
CACNA1C-230ENST00000543114 CRKLP46109 303 aaKnown RBP26.63■■□□□ 1.85
CACNA1C-230ENST00000543114 NLGN1Q8N2Q7 840 aa26.63■■□□□ 1.85
CACNA1C-230ENST00000543114 BRCA1P38398 1863 aaKnown RBP26.62■■□□□ 1.85
CACNA1C-230ENST00000543114 SLC52A2Q9HAB3 445 aa26.62■■□□□ 1.85
CACNA1C-230ENST00000543114 LGR6Q9HBX8 967 aa26.62■■□□□ 1.85
CACNA1C-230ENST00000543114 SENP3-EIF4A1A0A087X0R7 540 aa26.61■■□□□ 1.85
CACNA1C-230ENST00000543114 KCPQ6ZWJ8 1503 aa26.6■■□□□ 1.85
CACNA1C-230ENST00000543114 NPC1L1Q9UHC9 1359 aa26.6■■□□□ 1.85
CACNA1C-230ENST00000543114 DIAPH1O60610 1272 aaKnown RBP26.6■■□□□ 1.85
CACNA1C-230ENST00000543114 UBR2Q8IWV8 1755 aa26.59■■□□□ 1.85
CACNA1C-230ENST00000543114 RNMTO43148 476 aaKnown RBP26.58■■□□□ 1.85
CACNA1C-230ENST00000543114 MTHFSDQ2M296 383 aaKnown RBP26.58■■□□□ 1.85
CACNA1C-230ENST00000543114 SRP68Q9UHB9 627 aaKnown RBP26.58■■□□□ 1.85
CACNA1C-230ENST00000543114 CNGB1Q14028 1251 aaPredicted RBP26.57■■□□□ 1.84
CACNA1C-230ENST00000543114 USP42Q9H9J4 1324 aaKnown RBP26.57■■□□□ 1.84
CACNA1C-230ENST00000543114 SLC39A6Q13433 755 aa26.56■■□□□ 1.84
CACNA1C-230ENST00000543114 INTS5Q6P9B9 1019 aaKnown RBP26.56■■□□□ 1.84
CACNA1C-230ENST00000543114 DNAJC10Q8IXB1 793 aa26.56■■□□□ 1.84
CACNA1C-230ENST00000543114 TGFB2P61812 414 aa26.55■■□□□ 1.84
CACNA1C-230ENST00000543114 CCDC87Q9NVE4 849 aa26.55■■□□□ 1.84
CACNA1C-230ENST00000543114 PARP3Q9Y6F1 533 aa26.55■■□□□ 1.84
CACNA1C-230ENST00000543114 A0A0G2JLW4 131 aa26.53■■□□□ 1.84
CACNA1C-230ENST00000543114 SIPA1L3O60292 1781 aaPredicted RBP26.52■■□□□ 1.84
CACNA1C-230ENST00000543114 FKBP8Q14318 412 aa26.52■■□□□ 1.84
CACNA1C-230ENST00000543114 ARFGEF1Q9Y6D6 1849 aa26.51■■□□□ 1.83
CACNA1C-230ENST00000543114 SOS1Q07889 1333 aaPredicted RBP26.51■■□□□ 1.83
CACNA1C-230ENST00000543114 DDR1Q08345 913 aa26.51■■□□□ 1.83
CACNA1C-230ENST00000543114 ZNF526Q8TF50 670 aaPredicted RBP26.51■■□□□ 1.83
CACNA1C-230ENST00000543114 GPBP1L1Q9HC44 474 aaPredicted RBP26.51■■□□□ 1.83
CACNA1C-230ENST00000543114 BCS1LQ9Y276 419 aa26.51■■□□□ 1.83
CACNA1C-230ENST00000543114 DPEP1P16444 411 aa26.5■■□□□ 1.83
CACNA1C-230ENST00000543114 CEP350Q5VT06 3117 aa26.5■■□□□ 1.83
CACNA1C-230ENST00000543114 U2SURPO15042 1029 aaKnown RBP26.49■■□□□ 1.83
CACNA1C-230ENST00000543114 CYP19A1P11511 503 aaPredicted RBP26.49■■□□□ 1.83
CACNA1C-230ENST00000543114 AFDNP55196 1824 aaKnown RBP26.48■■□□□ 1.83
CACNA1C-230ENST00000543114 COL15A1P39059 1388 aa26.47■■□□□ 1.83
CACNA1C-230ENST00000543114 ZBTB1Q9Y2K1 713 aa26.47■■□□□ 1.83
CACNA1C-230ENST00000543114 USPL1Q5W0Q7 1092 aa26.46■■□□□ 1.83
CACNA1C-230ENST00000543114 POLRMTO00411 1230 aaKnown RBP26.45■■□□□ 1.82
CACNA1C-230ENST00000543114 KCNA3P22001 575 aa26.45■■□□□ 1.82
CACNA1C-230ENST00000543114 NRXN2Q9P2S2 1712 aa26.45■■□□□ 1.82
CACNA1C-230ENST00000543114 ZPR1O75312 459 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms