RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 GNPATO15228 680 aa15.65■□□□□ 0.1
SRGAP1-205ENST00000542841 MMP10P09238 476 aa15.65■□□□□ 0.1
SRGAP1-205ENST00000542841 SPG7Q9UQ90 795 aa15.65■□□□□ 0.1
SRGAP1-205ENST00000542841 ATP6V1AP38606 617 aa15.64■□□□□ 0.09
SRGAP1-205ENST00000542841 TGFB2P61812 414 aa15.64■□□□□ 0.09
SRGAP1-205ENST00000542841 DNAJC5GQ8N7S2 189 aa15.64■□□□□ 0.09
SRGAP1-205ENST00000542841 TMOD3Q9NYL9 352 aa15.64■□□□□ 0.09
SRGAP1-205ENST00000542841 BCS1LQ9Y276 419 aa15.64■□□□□ 0.09
SRGAP1-205ENST00000542841 ASAP1Q9ULH1 1129 aa15.63■□□□□ 0.09
SRGAP1-205ENST00000542841 NPC1L1Q9UHC9 1359 aa15.62■□□□□ 0.09
SRGAP1-205ENST00000542841 PER1O15534 1290 aaPredicted RBP15.62■□□□□ 0.09
SRGAP1-205ENST00000542841 ITPK1Q13572 414 aa15.62■□□□□ 0.09
SRGAP1-205ENST00000542841 PRKRIP1Q9H875 184 aaPredicted RBP15.62■□□□□ 0.09
SRGAP1-205ENST00000542841 PXDNLA1KZ92 1463 aa15.62■□□□□ 0.09
SRGAP1-205ENST00000542841 PKD1L3Q7Z443 1732 aa15.62■□□□□ 0.09
SRGAP1-205ENST00000542841 MAP2P11137 1827 aaKnown RBP15.61■□□□□ 0.09
SRGAP1-205ENST00000542841 A0A0G2JLW4 131 aa15.61■□□□□ 0.09
SRGAP1-205ENST00000542841 TRAPPC3LQ5T215 181 aa15.61■□□□□ 0.09
SRGAP1-205ENST00000542841 ARHGAP27Q6ZUM4 889 aa15.61■□□□□ 0.09
SRGAP1-205ENST00000542841 NLGN1Q8N2Q7 840 aa15.61■□□□□ 0.09
SRGAP1-205ENST00000542841 PANK3Q9H999 370 aa15.61■□□□□ 0.09
SRGAP1-205ENST00000542841 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.61■□□□□ 0.09
SRGAP1-205ENST00000542841 EMILIN1Q9Y6C2 1016 aa15.61■□□□□ 0.09
SRGAP1-205ENST00000542841 PPM1GO15355 546 aaPredicted RBP15.6■□□□□ 0.09
SRGAP1-205ENST00000542841 RALBP1Q15311 655 aa15.6■□□□□ 0.09
SRGAP1-205ENST00000542841 NMRK2Q9NPI5 230 aa15.6■□□□□ 0.09
SRGAP1-205ENST00000542841 RTCBQ9Y3I0 505 aaKnown RBP15.6■□□□□ 0.09
SRGAP1-205ENST00000542841 C16orf71Q8IYS4 520 aaPredicted RBP15.59■□□□□ 0.09
SRGAP1-205ENST00000542841 IFNL2Q8IZJ0 200 aa15.59■□□□□ 0.09
SRGAP1-205ENST00000542841 CCDC87Q9NVE4 849 aa15.59■□□□□ 0.09
SRGAP1-205ENST00000542841 KIF13BQ9NQT8 1826 aa15.59■□□□□ 0.09
SRGAP1-205ENST00000542841 NCAPD2Q15021 1401 aa15.59■□□□□ 0.09
SRGAP1-205ENST00000542841 FCHSD2O94868 740 aa15.58■□□□□ 0.08
SRGAP1-205ENST00000542841 PHKG2P15735 406 aa15.58■□□□□ 0.08
SRGAP1-205ENST00000542841 RBM46Q8TBY0 533 aaKnown RBP15.58■□□□□ 0.08
SRGAP1-205ENST00000542841 ATG3Q9NT62 314 aa15.58■□□□□ 0.08
SRGAP1-205ENST00000542841 KNSTRNQ9Y448 316 aa15.58■□□□□ 0.08
SRGAP1-205ENST00000542841 KIF20BQ96Q89 1820 aa15.58■□□□□ 0.08
SRGAP1-205ENST00000542841 C10orf71Q711Q0 1435 aa15.58■□□□□ 0.08
SRGAP1-205ENST00000542841 N4BP2Q86UW6 1770 aaPredicted RBP15.57■□□□□ 0.08
SRGAP1-205ENST00000542841 DPEP1P16444 411 aa15.57■□□□□ 0.08
SRGAP1-205ENST00000542841 ADRA2BP18089 450 aa15.56■□□□□ 0.08
SRGAP1-205ENST00000542841 EYA1Q99502 592 aa15.56■□□□□ 0.08
SRGAP1-205ENST00000542841 PARP3Q9Y6F1 533 aa15.56■□□□□ 0.08
SRGAP1-205ENST00000542841 KIAA1551Q9HCM1 1747 aa15.56■□□□□ 0.08
SRGAP1-205ENST00000542841 PLEKHG2Q9H7P9 1386 aa15.55■□□□□ 0.08
SRGAP1-205ENST00000542841 RFC4P35249 363 aa15.55■□□□□ 0.08
SRGAP1-205ENST00000542841 FSTL1Q12841 308 aa15.55■□□□□ 0.08
SRGAP1-205ENST00000542841 C9orf131Q5VYM1 1079 aa15.55■□□□□ 0.08
SRGAP1-205ENST00000542841 ARHGEF1Q92888 912 aaKnown RBP15.55■□□□□ 0.08
SRGAP1-205ENST00000542841 KLRG1Q96E93 195 aa15.55■□□□□ 0.08
SRGAP1-205ENST00000542841 RBM42Q9BTD8 480 aaKnown RBP15.55■□□□□ 0.08
SRGAP1-205ENST00000542841 KDRP35968 1356 aa15.54■□□□□ 0.08
SRGAP1-205ENST00000542841 GYS1P13807 737 aa15.54■□□□□ 0.08
SRGAP1-205ENST00000542841 RC3H1Q5TC82 1133 aaKnown RBP15.54■□□□□ 0.08
SRGAP1-205ENST00000542841 CARD14Q9BXL6 1004 aa15.54■□□□□ 0.08
SRGAP1-205ENST00000542841 WDR90Q96KV7 1748 aa15.54■□□□□ 0.08
SRGAP1-205ENST00000542841 KDM2BQ8NHM5 1336 aa15.53■□□□□ 0.08
SRGAP1-205ENST00000542841 JMYQ8N9B5 988 aa15.53■□□□□ 0.08
SRGAP1-205ENST00000542841 PIM2Q9P1W9 311 aa15.53■□□□□ 0.08
SRGAP1-205ENST00000542841 C4AP0C0L4 1744 aa15.52■□□□□ 0.08
SRGAP1-205ENST00000542841 MYBBP1AQ9BQG0 1328 aaKnown RBP15.52■□□□□ 0.08
SRGAP1-205ENST00000542841 CNTNAP4Q9C0A0 1308 aa15.52■□□□□ 0.08
SRGAP1-205ENST00000542841 ERVV-2B6SEH9 535 aa15.52■□□□□ 0.08
SRGAP1-205ENST00000542841 RPS6KA4O75676 772 aa15.52■□□□□ 0.08
SRGAP1-205ENST00000542841 KCNA3P22001 575 aa15.52■□□□□ 0.08
SRGAP1-205ENST00000542841 HTRA3P83110 453 aa15.52■□□□□ 0.08
SRGAP1-205ENST00000542841 AMER1Q5JTC6 1135 aaPredicted RBP15.52■□□□□ 0.08
SRGAP1-205ENST00000542841 COL13A1Q5TAT6 717 aaPredicted RBP15.52■□□□□ 0.08
SRGAP1-205ENST00000542841 SLC4A9Q96Q91 983 aa15.52■□□□□ 0.08
SRGAP1-205ENST00000542841 ANKRD26Q9UPS8 1709 aa15.51■□□□□ 0.07
SRGAP1-205ENST00000542841 HSP90AB1P08238 724 aaKnown RBP15.5■□□□□ 0.07
SRGAP1-205ENST00000542841 DALRD3Q5D0E6 543 aaKnown RBP15.5■□□□□ 0.07
SRGAP1-205ENST00000542841 DCAF5Q96JK2 942 aa15.5■□□□□ 0.07
SRGAP1-205ENST00000542841 RNF181Q9P0P0 153 aa15.5■□□□□ 0.07
SRGAP1-205ENST00000542841 KCPQ6ZWJ8 1503 aa15.49■□□□□ 0.07
SRGAP1-205ENST00000542841 BRCA1P38398 1863 aaKnown RBP15.49■□□□□ 0.07
SRGAP1-205ENST00000542841 ZNF831Q5JPB2 1677 aa15.49■□□□□ 0.07
SRGAP1-205ENST00000542841 RRAGCQ9HB90 399 aa15.49■□□□□ 0.07
SRGAP1-205ENST00000542841 POLKQ9UBT6 870 aa15.49■□□□□ 0.07
SRGAP1-205ENST00000542841 CAPN15O75808 1086 aa15.48■□□□□ 0.07
SRGAP1-205ENST00000542841 PCNTO95613 3336 aa15.48■□□□□ 0.07
SRGAP1-205ENST00000542841 ARFGEF1Q9Y6D6 1849 aa15.47■□□□□ 0.07
SRGAP1-205ENST00000542841 COL5A3P25940 1745 aaPredicted RBP15.47■□□□□ 0.07
SRGAP1-205ENST00000542841 CABP4P57796 275 aa15.47■□□□□ 0.07
SRGAP1-205ENST00000542841 EIF4A2Q14240 407 aaKnown RBP15.47■□□□□ 0.07
SRGAP1-205ENST00000542841 TNS4Q8IZW8 715 aa15.47■□□□□ 0.07
SRGAP1-205ENST00000542841 SMC1BQ8NDV3 1235 aa15.47■□□□□ 0.07
SRGAP1-205ENST00000542841 PLEKHO1Q53GL0 409 aaPredicted RBP15.46■□□□□ 0.07
SRGAP1-205ENST00000542841 PTCD1O75127 700 aaKnown RBP15.45■□□□□ 0.06
SRGAP1-205ENST00000542841 CRKLP46109 303 aaKnown RBP15.45■□□□□ 0.06
SRGAP1-205ENST00000542841 FKBP8Q14318 412 aa15.45■□□□□ 0.06
SRGAP1-205ENST00000542841 SRP68Q9UHB9 627 aaKnown RBP15.45■□□□□ 0.06
SRGAP1-205ENST00000542841 USP42Q9H9J4 1324 aaKnown RBP15.44■□□□□ 0.06
SRGAP1-205ENST00000542841 CHRNA5P30532 468 aa15.44■□□□□ 0.06
SRGAP1-205ENST00000542841 TNNT2P45379 298 aaPredicted RBP15.44■□□□□ 0.06
SRGAP1-205ENST00000542841 DDR1Q08345 913 aa15.44■□□□□ 0.06
SRGAP1-205ENST00000542841 AMOTQ4VCS5 1084 aa15.44■□□□□ 0.06
SRGAP1-205ENST00000542841 CC2D1BQ5T0F9 858 aaKnown RBP15.44■□□□□ 0.06
SRGAP1-205ENST00000542841 MRS2Q9HD23 443 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms