RNA–Protein interactions for RNA: ENST00000542669.1

PACRG-206, Transcript of parkin coregulated, humanhuman

TSL 4

Gene PACRG, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-206ENST00000542669 CANXP27824 592 aaKnown RBP8.65□□□□□ -1.02
PACRG-206ENST00000542669 TEFQ10587 303 aa8.65□□□□□ -1.02
PACRG-206ENST00000542669 MRPL50Q8N5N7 158 aaKnown RBP8.65□□□□□ -1.02
PACRG-206ENST00000542669 ZCRB1Q8TBF4 217 aaKnown RBP8.65□□□□□ -1.02
PACRG-206ENST00000542669 FRAT1Q92837 279 aaPredicted RBP8.65□□□□□ -1.02
PACRG-206ENST00000542669 PCDH11XQ9BZA7 1347 aa8.64□□□□□ -1.03
PACRG-206ENST00000542669 PCDH11YQ9BZA8 1340 aa8.64□□□□□ -1.03
PACRG-206ENST00000542669 NUTM2BA6NNL0 878 aaPredicted RBP8.64□□□□□ -1.03
PACRG-206ENST00000542669 NUTM2EB1AL46 878 aaPredicted RBP8.64□□□□□ -1.03
PACRG-206ENST00000542669 HSP90AB1P08238 724 aaKnown RBP8.64□□□□□ -1.03
PACRG-206ENST00000542669 RLBP1P12271 317 aa8.64□□□□□ -1.03
PACRG-206ENST00000542669 ZKSCAN2Q63HK3 967 aa8.64□□□□□ -1.03
PACRG-206ENST00000542669 NUTM2AQ8IVF1 878 aaPredicted RBP8.64□□□□□ -1.03
PACRG-206ENST00000542669 PANK1Q8TE04 598 aa8.64□□□□□ -1.03
PACRG-206ENST00000542669 DCAF5Q96JK2 942 aa8.64□□□□□ -1.03
PACRG-206ENST00000542669 NOB1Q9ULX3 412 aaKnown RBP8.64□□□□□ -1.03
PACRG-206ENST00000542669 TNNQ9UQP3 1299 aa8.64□□□□□ -1.03
PACRG-206ENST00000542669 SPATA31A6Q5VVP1 1343 aa8.63□□□□□ -1.03
PACRG-206ENST00000542669 LRP6O75581 1613 aa8.63□□□□□ -1.03
PACRG-206ENST00000542669 BTBD11A6QL63 1104 aa8.63□□□□□ -1.03
PACRG-206ENST00000542669 IPO8O15397 1037 aaKnown RBP8.63□□□□□ -1.03
PACRG-206ENST00000542669 CAPN15O75808 1086 aa8.63□□□□□ -1.03
PACRG-206ENST00000542669 MS4A1P11836 297 aa8.63□□□□□ -1.03
PACRG-206ENST00000542669 TRIM27P14373 513 aa8.63□□□□□ -1.03
PACRG-206ENST00000542669 EIF4A1P60842 406 aaKnown RBP8.63□□□□□ -1.03
PACRG-206ENST00000542669 NKX1-1Q15270 411 aaPredicted RBP8.63□□□□□ -1.03
PACRG-206ENST00000542669 B4GALNT3Q6L9W6 998 aa8.63□□□□□ -1.03
PACRG-206ENST00000542669 ATF7IPQ6VMQ6 1270 aa8.63□□□□□ -1.03
PACRG-206ENST00000542669 ARHGAP45Q92619 1136 aa8.63□□□□□ -1.03
PACRG-206ENST00000542669 SLC52A2Q9HAB3 445 aa8.63□□□□□ -1.03
PACRG-206ENST00000542669 CACNA1FO60840 1977 aa8.62□□□□□ -1.03
PACRG-206ENST00000542669 HEG1Q9ULI3 1381 aa8.62□□□□□ -1.03
PACRG-206ENST00000542669 SPATA31A1Q5TZJ5 1347 aa8.62□□□□□ -1.03
PACRG-206ENST00000542669 TCERG1O14776 1098 aaKnown RBP8.62□□□□□ -1.03
PACRG-206ENST00000542669 KCNQ3O43525 872 aa8.62□□□□□ -1.03
PACRG-206ENST00000542669 HOXB7P09629 217 aa8.62□□□□□ -1.03
PACRG-206ENST00000542669 HSPA1LP34931 641 aa8.62□□□□□ -1.03
PACRG-206ENST00000542669 DZIP1LQ8IYY4 767 aaKnown RBP8.62□□□□□ -1.03
PACRG-206ENST00000542669 USP35Q9P2H5 1018 aa8.62□□□□□ -1.03
PACRG-206ENST00000542669 SPATA31A5Q5VU36 1347 aa8.61□□□□□ -1.03
PACRG-206ENST00000542669 SPATA31A7Q8IWB4 1347 aa8.61□□□□□ -1.03
PACRG-206ENST00000542669 TOGARAM1Q9Y4F4 1720 aa8.61□□□□□ -1.03
PACRG-206ENST00000542669 FTSJ3Q8IY81 847 aaKnown RBP8.61□□□□□ -1.03
PACRG-206ENST00000542669 CLUAP1Q96AJ1 413 aa8.61□□□□□ -1.03
PACRG-206ENST00000542669 CCDC136Q96JN2 1154 aa8.61□□□□□ -1.03
PACRG-206ENST00000542669 COG6Q9Y2V7 657 aa8.61□□□□□ -1.03
PACRG-206ENST00000542669 THRAP3Q9Y2W1 955 aaKnown RBP8.61□□□□□ -1.03
PACRG-206ENST00000542669 RGS12O14924 1447 aa8.61□□□□□ -1.03
PACRG-206ENST00000542669 TNS2Q63HR2 1409 aa8.61□□□□□ -1.03
PACRG-206ENST00000542669 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.6□□□□□ -1.03
PACRG-206ENST00000542669 BCL9LQ86UU0 1499 aa8.6□□□□□ -1.03
PACRG-206ENST00000542669 ERVV-2B6SEH9 535 aa8.6□□□□□ -1.03
PACRG-206ENST00000542669 AAMPQ13685 434 aa8.6□□□□□ -1.03
PACRG-206ENST00000542669 MVPQ14764 893 aaKnown RBP8.6□□□□□ -1.03
PACRG-206ENST00000542669 CCDC30Q5VVM6 783 aa8.6□□□□□ -1.03
PACRG-206ENST00000542669 ZNF790Q6PG37 636 aa8.6□□□□□ -1.03
PACRG-206ENST00000542669 UNC5CLQ8IV45 518 aa8.6□□□□□ -1.03
PACRG-206ENST00000542669 FNBP4Q8N3X1 1017 aaPredicted RBP8.6□□□□□ -1.03
PACRG-206ENST00000542669 NFATC2IPQ8NCF5 419 aa8.6□□□□□ -1.03
PACRG-206ENST00000542669 CDCA7Q9BWT1 371 aaPredicted RBP8.6□□□□□ -1.03
PACRG-206ENST00000542669 PAPPAQ13219 1627 aa8.6□□□□□ -1.03
PACRG-206ENST00000542669 GLI3P10071 1580 aa8.6□□□□□ -1.03
PACRG-206ENST00000542669 ABCC4O15439 1325 aa8.59□□□□□ -1.03
PACRG-206ENST00000542669 PTPRCP08575 1304 aa8.59□□□□□ -1.03
PACRG-206ENST00000542669 UBR2Q8IWV8 1755 aa8.59□□□□□ -1.03
PACRG-206ENST00000542669 GIGYF1O75420 1035 aaPredicted RBP8.59□□□□□ -1.03
PACRG-206ENST00000542669 SLC4A2P04920 1241 aa8.59□□□□□ -1.03
PACRG-206ENST00000542669 CABP4P57796 275 aa8.59□□□□□ -1.03
PACRG-206ENST00000542669 BARGINQ6ZT62 677 aa8.59□□□□□ -1.03
PACRG-206ENST00000542669 TMEM57Q8N5G2 664 aa8.59□□□□□ -1.03
PACRG-206ENST00000542669 DDX54Q8TDD1 881 aaKnown RBP8.59□□□□□ -1.03
PACRG-206ENST00000542669 NGLY1Q96IV0 654 aa8.59□□□□□ -1.03
PACRG-206ENST00000542669 C8orf37Q96NL8 207 aa8.59□□□□□ -1.03
PACRG-206ENST00000542669 API5Q9BZZ5 524 aaKnown RBP8.59□□□□□ -1.03
PACRG-206ENST00000542669 C5P01031 1676 aa8.59□□□□□ -1.03
PACRG-206ENST00000542669 SLC39A6Q13433 755 aa8.58□□□□□ -1.04
PACRG-206ENST00000542669 VPS72Q15906 364 aa8.58□□□□□ -1.04
PACRG-206ENST00000542669 HDGFL1Q5TGJ6 251 aa8.58□□□□□ -1.04
PACRG-206ENST00000542669 STK31Q9BXU1 1019 aa8.58□□□□□ -1.04
PACRG-206ENST00000542669 CHMP4AQ9BY43 222 aa8.58□□□□□ -1.04
PACRG-206ENST00000542669 DDX19BQ9UMR2 479 aa8.58□□□□□ -1.04
PACRG-206ENST00000542669 ITGB4P16144 1822 aa8.57□□□□□ -1.04
PACRG-206ENST00000542669 EXOC5O00471 708 aa8.57□□□□□ -1.04
PACRG-206ENST00000542669 G2E3Q7L622 706 aa8.57□□□□□ -1.04
PACRG-206ENST00000542669 ITPRIPQ8IWB1 547 aa8.57□□□□□ -1.04
PACRG-206ENST00000542669 ZNF496Q96IT1 587 aaPredicted RBP8.57□□□□□ -1.04
PACRG-206ENST00000542669 U3KPZ7 1027 aaPredicted RBP8.57□□□□□ -1.04
PACRG-206ENST00000542669 KCPQ6ZWJ8 1503 aa8.57□□□□□ -1.04
PACRG-206ENST00000542669 N4BP2Q86UW6 1770 aaPredicted RBP8.57□□□□□ -1.04
PACRG-206ENST00000542669 KDM2BQ8NHM5 1336 aa8.56□□□□□ -1.04
PACRG-206ENST00000542669 LAMB4A4D0S4 1761 aa8.56□□□□□ -1.04
PACRG-206ENST00000542669 PRAMEF22A3QJZ6 481 aa8.56□□□□□ -1.04
PACRG-206ENST00000542669 EIF2S2P20042 333 aaKnown RBP8.56□□□□□ -1.04
PACRG-206ENST00000542669 FLIIQ13045 1269 aa8.56□□□□□ -1.04
PACRG-206ENST00000542669 INTS3Q68E01 1043 aaKnown RBP8.56□□□□□ -1.04
PACRG-206ENST00000542669 TTC5Q8N0Z6 440 aa8.56□□□□□ -1.04
PACRG-206ENST00000542669 NECTIN2Q92692 538 aa8.56□□□□□ -1.04
PACRG-206ENST00000542669 FMNL2Q96PY5 1086 aa8.56□□□□□ -1.04
PACRG-206ENST00000542669 ZBTB40Q9NUA8 1239 aa8.56□□□□□ -1.04
PACRG-206ENST00000542669 CHPF2Q9P2E5 772 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms