RNA–Protein interactions for RNA: ENST00000542381.1

SRGAP1-204, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 360 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-204ENST00000542381 PHF20L1A8MW92 1017 aa11.3□□□□□ -0.6
SRGAP1-204ENST00000542381 MYCP01106 439 aaPredicted RBP11.3□□□□□ -0.6
SRGAP1-204ENST00000542381 ZSCAN10Q96SZ4 725 aaPredicted RBP11.3□□□□□ -0.6
SRGAP1-204ENST00000542381 STAU1O95793 577 aaKnown RBP11.29□□□□□ -0.6
SRGAP1-204ENST00000542381 PLA2G4EQ3MJ16 856 aa11.29□□□□□ -0.6
SRGAP1-204ENST00000542381 FHDC1Q9C0D6 1143 aaPredicted RBP11.29□□□□□ -0.6
SRGAP1-204ENST00000542381 NSFL1CQ9UNZ2 370 aaKnown RBP11.29□□□□□ -0.6
SRGAP1-204ENST00000542381 OIP5O43482 229 aa11.28□□□□□ -0.6
SRGAP1-204ENST00000542381 ITGB2P05107 769 aa11.28□□□□□ -0.6
SRGAP1-204ENST00000542381 PODNQ7Z5L7 613 aa11.28□□□□□ -0.6
SRGAP1-204ENST00000542381 CFHR5Q9BXR6 569 aa11.28□□□□□ -0.6
SRGAP1-204ENST00000542381 TBC1D2BQ9UPU7 963 aa11.28□□□□□ -0.6
SRGAP1-204ENST00000542381 APBB1O00213 710 aa11.27□□□□□ -0.61
SRGAP1-204ENST00000542381 OXCT2Q9BYC2 517 aaPredicted RBP11.27□□□□□ -0.61
SRGAP1-204ENST00000542381 A0A1B0GTH6 734 aa11.26□□□□□ -0.61
SRGAP1-204ENST00000542381 UBAP2LQ14157 1087 aaKnown RBP11.26□□□□□ -0.61
SRGAP1-204ENST00000542381 C4orf17Q53FE4 359 aa11.26□□□□□ -0.61
SRGAP1-204ENST00000542381 TMEM214Q6NUQ4 689 aaKnown RBP11.26□□□□□ -0.61
SRGAP1-204ENST00000542381 LRRC4BQ9NT99 713 aa11.26□□□□□ -0.61
SRGAP1-204ENST00000542381 C1orf229Q6ZS94 237 aaPredicted RBP11.25□□□□□ -0.61
SRGAP1-204ENST00000542381 PHTF2Q8N3S3 785 aa11.25□□□□□ -0.61
SRGAP1-204ENST00000542381 RUBCNLQ9H714 662 aa11.25□□□□□ -0.61
SRGAP1-204ENST00000542381 MAP2K3P46734 347 aa11.24□□□□□ -0.61
SRGAP1-204ENST00000542381 SNRPNP63162 240 aaKnown RBP11.24□□□□□ -0.61
SRGAP1-204ENST00000542381 GNASQ5JWF2 1037 aa11.24□□□□□ -0.61
SRGAP1-204ENST00000542381 KLRG1Q96E93 195 aa11.24□□□□□ -0.61
SRGAP1-204ENST00000542381 ETNK1Q9HBU6 452 aa11.24□□□□□ -0.61
SRGAP1-204ENST00000542381 SHISA8B8ZZ34 492 aa11.23□□□□□ -0.61
SRGAP1-204ENST00000542381 MSTNO14793 375 aa11.23□□□□□ -0.61
SRGAP1-204ENST00000542381 MSX1P28360 303 aa11.23□□□□□ -0.61
SRGAP1-204ENST00000542381 IRF5Q13568 498 aa11.23□□□□□ -0.61
SRGAP1-204ENST00000542381 GTF2E1P29083 439 aaPredicted RBP11.22□□□□□ -0.61
SRGAP1-204ENST00000542381 ESCO1Q5FWF5 840 aa11.22□□□□□ -0.61
SRGAP1-204ENST00000542381 GALNT6Q8NCL4 622 aa11.22□□□□□ -0.61
SRGAP1-204ENST00000542381 SPOCK3Q9BQ16 436 aa11.22□□□□□ -0.61
SRGAP1-204ENST00000542381 DOLKQ9UPQ8 538 aa11.22□□□□□ -0.61
SRGAP1-204ENST00000542381 PHF24Q9UPV7 400 aa11.22□□□□□ -0.61
SRGAP1-204ENST00000542381 USP4Q13107 963 aa11.21□□□□□ -0.61
SRGAP1-204ENST00000542381 C2CD2LO14523 706 aa11.2□□□□□ -0.62
SRGAP1-204ENST00000542381 CSB-PGBD3P0DP91 1061 aa11.2□□□□□ -0.62
SRGAP1-204ENST00000542381 EIF4G2P78344 907 aaKnown RBP eCLIP11.2□□□□□ -0.62
SRGAP1-204ENST00000542381 PGBD3Q8N328 593 aa11.2□□□□□ -0.62
SRGAP1-204ENST00000542381 SLFNL1Q499Z3 407 aa11.19□□□□□ -0.62
SRGAP1-204ENST00000542381 OXLD1Q5BKU9 147 aa11.19□□□□□ -0.62
SRGAP1-204ENST00000542381 PPARGC1BQ86YN6 1023 aaKnown RBP11.19□□□□□ -0.62
SRGAP1-204ENST00000542381 RNF135Q8IUD6 432 aa11.19□□□□□ -0.62
SRGAP1-204ENST00000542381 RHBDD1Q8TEB9 315 aa11.19□□□□□ -0.62
SRGAP1-204ENST00000542381 ABHD17AQ96GS6 310 aa11.19□□□□□ -0.62
SRGAP1-204ENST00000542381 PROCP04070 461 aa11.18□□□□□ -0.62
SRGAP1-204ENST00000542381 LBRQ14739 615 aaKnown RBP11.18□□□□□ -0.62
SRGAP1-204ENST00000542381 TLR1Q15399 786 aa11.18□□□□□ -0.62
SRGAP1-204ENST00000542381 EFHC2Q5JST6 749 aa11.17□□□□□ -0.62
SRGAP1-204ENST00000542381 EDARADDQ8WWZ3 215 aa11.17□□□□□ -0.62
SRGAP1-204ENST00000542381 CHIC2Q9UKJ5 165 aa11.17□□□□□ -0.62
SRGAP1-204ENST00000542381 ATXN7L1Q9ULK2 861 aaPredicted RBP11.17□□□□□ -0.62
SRGAP1-204ENST00000542381 BNIP3LO60238 219 aa11.16□□□□□ -0.62
SRGAP1-204ENST00000542381 CTBSQ01459 385 aa11.16□□□□□ -0.62
SRGAP1-204ENST00000542381 VAC14Q08AM6 782 aa11.16□□□□□ -0.62
SRGAP1-204ENST00000542381 NDFIP2Q9NV92 336 aa11.16□□□□□ -0.62
SRGAP1-204ENST00000542381 GDF2Q9UK05 429 aaPredicted RBP11.16□□□□□ -0.62
SRGAP1-204ENST00000542381 BMP4P12644 408 aa11.15□□□□□ -0.62
SRGAP1-204ENST00000542381 SCNN1DP51172 638 aa11.15□□□□□ -0.62
SRGAP1-204ENST00000542381 RRAGCQ9HB90 399 aa11.15□□□□□ -0.62
SRGAP1-204ENST00000542381 KRBA1A5PL33 1030 aa11.14□□□□□ -0.63
SRGAP1-204ENST00000542381 FGFR3P22607 806 aa11.14□□□□□ -0.63
SRGAP1-204ENST00000542381 PLA2G4AP47712 749 aa11.14□□□□□ -0.63
SRGAP1-204ENST00000542381 CRISPLD1Q9H336 500 aa11.14□□□□□ -0.63
SRGAP1-204ENST00000542381 PRM3Q9NNZ6 103 aa11.14□□□□□ -0.63
SRGAP1-204ENST00000542381 MKL2Q9ULH7 1088 aa11.14□□□□□ -0.63
SRGAP1-204ENST00000542381 ADAM23O75077 832 aa11.13□□□□□ -0.63
SRGAP1-204ENST00000542381 COL8A1P27658 744 aa11.13□□□□□ -0.63
SRGAP1-204ENST00000542381 GOLGA6L1Q8N7Z2 621 aa11.13□□□□□ -0.63
SRGAP1-204ENST00000542381 GGA1Q9UJY5 639 aa11.13□□□□□ -0.63
SRGAP1-204ENST00000542381 INHAP05111 366 aa11.12□□□□□ -0.63
SRGAP1-204ENST00000542381 HOXB4P17483 251 aaPredicted RBP11.12□□□□□ -0.63
SRGAP1-204ENST00000542381 GDF10P55107 478 aa11.12□□□□□ -0.63
SRGAP1-204ENST00000542381 GDPD2Q9HCC8 539 aa11.12□□□□□ -0.63
SRGAP1-204ENST00000542381 DNAAF2Q9NVR5 837 aaKnown RBP11.12□□□□□ -0.63
SRGAP1-204ENST00000542381 TBC1D9Q6ZT07 1266 aa11.11□□□□□ -0.63
SRGAP1-204ENST00000542381 SIRT1Q96EB6 747 aa11.11□□□□□ -0.63
SRGAP1-204ENST00000542381 ATP4AP20648 1035 aa11.1□□□□□ -0.63
SRGAP1-204ENST00000542381 LINC00114Q6XXX2 140 aa11.1□□□□□ -0.63
SRGAP1-204ENST00000542381 ZCCHC2Q9C0B9 1178 aaKnown RBP11.1□□□□□ -0.63
SRGAP1-204ENST00000542381 AMPD1P23109 780 aa11.09□□□□□ -0.63
SRGAP1-204ENST00000542381 ABL2P42684 1182 aa11.09□□□□□ -0.63
SRGAP1-204ENST00000542381 SLCO4C1Q6ZQN7 724 aa11.09□□□□□ -0.63
SRGAP1-204ENST00000542381 AIDAQ96BJ3 306 aa11.09□□□□□ -0.63
SRGAP1-204ENST00000542381 SUV39H2Q9H5I1 410 aa11.09□□□□□ -0.63
SRGAP1-204ENST00000542381 HCN2Q9UL51 889 aa11.09□□□□□ -0.63
SRGAP1-204ENST00000542381 SMTNP53814 917 aa11.08□□□□□ -0.64
SRGAP1-204ENST00000542381 PLPP7Q8NBV4 271 aa11.08□□□□□ -0.64
SRGAP1-204ENST00000542381 SERTAD1Q9UHV2 236 aa11.08□□□□□ -0.64
SRGAP1-204ENST00000542381 PCDHGC4Q9Y5F7 938 aa11.08□□□□□ -0.64
SRGAP1-204ENST00000542381 TPRNQ4KMQ1 711 aa11.07□□□□□ -0.64
SRGAP1-204ENST00000542381 BTBD6Q96KE9 485 aa11.07□□□□□ -0.64
SRGAP1-204ENST00000542381 NIFKQ9BYG3 293 aaKnown RBP11.07□□□□□ -0.64
SRGAP1-204ENST00000542381 EPXP11678 715 aa11.06□□□□□ -0.64
SRGAP1-204ENST00000542381 MAP7D1Q3KQU3 841 aa11.06□□□□□ -0.64
SRGAP1-204ENST00000542381 FIGNL1Q6PIW4 674 aa11.06□□□□□ -0.64
SRGAP1-204ENST00000542381 NEURL1BA8MQ27 555 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms